Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
PLYVIDKPITLHILTQLRDKYTDQINFRKNLVRLGRILGYEISNTLDYEIVEVETPLGVKTKGVDITDLNNIVIINILRA
AVPLVEGLLKAFPKARQGVIGASRKDMDVYIYYKKIPDIRAKVDNVIIADPMIATASTMLKVLEEVVKANPKRIYIVSII
SSEYGVNKILSKYPFIYLFTVAIDPELNNKGYILPGLGDAGDRAFG

The query sequence (length=206) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 3g6w:A 215 215 1.0000 0.9581 0.9581 3.52e-143 3g6w:B, 3g6w:D, 3g6w:C, 1vst:A, 1xtt:A, 1xtt:B, 1xtt:C, 1xtt:D, 1xtu:A, 1xtu:H, 1xtu:B, 1xtu:C, 1xtu:F, 1xtu:G, 1xtu:D, 1xtu:E, 1xtv:A, 1xtv:C, 1xtv:E, 1xtv:G
2 1o5o:A 210 206 0.3932 0.3857 0.3932 4.83e-39 1o5o:B, 1o5o:C, 1o5o:D
3 1i5e:A 208 208 0.3641 0.3606 0.3606 4.38e-37 1i5e:B
4 6wn8:E 210 209 0.3107 0.3048 0.3062 3.34e-27 6wn8:F, 6wn8:A, 6wn8:B
5 1jlr:A 235 199 0.3398 0.2979 0.3518 4.27e-26 1bd3:C, 1bd3:B, 1bd3:A, 1bd4:D, 1bd4:C, 1bd4:B, 1bd4:A, 1jlr:B, 1jlr:D, 1jlr:C, 1jls:B, 1jls:A, 1jls:D, 1jls:C, 1upf:D, 1upf:C, 1upf:B, 1upf:A, 1upu:D, 1upu:C, 1upu:B, 1upu:A
6 7rh8:A 212 194 0.2816 0.2736 0.2990 7.50e-16
7 1zfj:A 476 90 0.1262 0.0546 0.2889 0.50
8 7o0h:B 523 123 0.1699 0.0669 0.2846 2.9
9 6uv6:C 264 80 0.1068 0.0833 0.2750 3.2 6uv6:A, 6uv6:B
10 4yrb:B 215 114 0.1408 0.1349 0.2544 3.5 4yrb:F
11 7jve:B 251 56 0.0825 0.0677 0.3036 4.5 7jve:C, 7jve:F
12 1bzy:A 214 36 0.0631 0.0607 0.3611 4.5 6bnj:A, 6bnj:B, 6bnj:C, 6bnj:D, 5brn:A, 5brn:C, 5brn:D, 1bzy:B, 1bzy:C, 1bzy:D, 1d6n:A, 1d6n:B, 3gep:A, 3gep:B, 3ggc:A, 3ggc:B, 3ggj:A, 3ggj:B, 5hia:A, 5hia:B, 5hia:C, 5hia:D, 1hmp:A, 1hmp:B, 4ijq:A, 4ijq:B, 4ijq:C, 4ijq:D, 4rab:A, 4rab:B, 4rab:C, 4rab:D, 4rac:A, 4rac:B, 4rac:C, 4rac:D, 4rad:A, 4rad:B, 4rad:C, 4rad:D, 4rad:E, 4rad:F, 4rad:G, 4rad:H, 4ran:A, 4ran:B, 4ran:C, 4ran:D, 4rao:A, 4rao:B, 4rao:C, 4rao:D, 4raq:A, 4raq:B, 4raq:C, 4raq:D, 7san:A, 7san:B, 7san:C, 7san:D, 8tpv:A, 8tpv:B, 8tpv:C, 8tpv:D, 5w8v:A, 5w8v:B, 5w8v:C, 5w8v:D
13 2xcl:A 421 35 0.0728 0.0356 0.4286 4.5 2xd4:A
14 5brn:B 194 36 0.0631 0.0670 0.3611 4.8 5bsk:A, 5bsk:B, 5bsk:C, 5bsk:D, 4kn6:A, 8tpy:A, 8tpy:B, 8tpy:C, 8tpy:D
15 5h71:B 492 25 0.0534 0.0224 0.4400 4.8 5h6u:A, 5h6u:B, 5h71:A, 1j1n:A, 1j1n:B, 6jhx:A, 6jhx:B, 1kwh:A, 4tqu:Q, 4xig:Q, 4xtc:Q
16 2ox6:A 162 63 0.0728 0.0926 0.2381 5.9
17 5uzc:B 347 114 0.1408 0.0836 0.2544 6.0 4q32:A, 4q32:C, 4q32:B, 4q32:D, 4q33:A, 4q33:C, 4q33:B, 4q33:D, 4q33:E, 4q33:G, 4q33:F, 4q33:H, 5uwx:A, 5uwx:B, 5uwx:C, 5uwx:D, 5uxe:A, 5uxe:C, 5uxe:B, 5uxe:D, 5uzc:A, 5uzc:D, 5uzc:C, 5uze:A, 5uze:C, 5uze:B, 5uze:D, 5uzs:A, 5uzs:C, 5uzs:B, 5uzs:D, 5vsv:A, 5vsv:C, 5vsv:B, 5vsv:D
18 6vgs:BBB 543 60 0.0680 0.0258 0.2333 7.2 6vgs:AAA, 6vgs:CCC, 6vgs:DDD
19 1eep:A 314 132 0.1602 0.1051 0.2500 7.5
20 7p70:A 407 45 0.0728 0.0369 0.3333 8.6 7pc4:A, 7qql:A
21 7nmi:B 488 45 0.0728 0.0307 0.3333 8.7 1j55:A
22 1ecf:B 500 143 0.1602 0.0660 0.2308 8.7 6czf:A, 6czf:C, 6czf:B, 6czf:D, 1ecb:A, 1ecb:B, 1ecb:C, 1ecb:D, 1ecc:A, 1ecc:B, 1ecf:A, 1ecg:A, 1ecg:B, 1ecj:A, 1ecj:C, 6ott:A, 6ott:B, 8w7d:A, 8w7d:B, 8w7d:C, 8w7d:D
23 5n7d:A 423 45 0.0728 0.0355 0.3333 9.1 2i04:A, 2i04:B, 5n7d:B, 5n7f:A, 5n7f:B, 5n7g:A, 7p71:A, 7p71:B, 6twq:B, 6twq:A, 6twu:B, 6twu:A, 6twx:B, 6twx:A, 6twy:B, 6twy:A
24 6cxo:A 465 49 0.0777 0.0344 0.3265 9.4 6cxo:B
25 7o0g:A 733 78 0.1214 0.0341 0.3205 9.6 7o0h:A, 7o24:A
26 7qqm:A 413 45 0.0728 0.0363 0.3333 9.6
27 7pc5:A 405 45 0.0728 0.0370 0.3333 9.6
28 2a92:C 318 50 0.0534 0.0346 0.2200 9.7 2a92:A, 2a92:B, 2a92:D, 2a94:A, 2aa3:A, 2aa3:B, 2aa3:C, 2aa3:D, 4b7u:A, 5hru:A, 5hru:B, 5hto:A, 5hto:B, 5hto:D, 5hto:E, 1oc4:A, 1oc4:B, 4plz:A, 1t24:A, 1t25:A, 1t26:A, 1t2c:A, 1t2d:A, 6txr:A, 6txr:B, 6txr:C, 6txr:D, 3zh2:A, 3zh2:B, 3zh2:C, 3zh2:D
29 7pc3:A 405 45 0.0728 0.0370 0.3333 9.7 2awu:B, 2aww:A, 2awx:B, 8cn3:A, 8cn3:B, 2g2l:A, 2g2l:B, 4g69:A, 2i0l:A, 2i0l:B, 2m3m:A, 4oaj:A, 2oqs:A, 3rl8:B

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218