BioLiP

>protein
PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQEALD
HVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQG
DWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGE
VTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYG
LLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRAS
NIDPARVLS

The query sequence (length=409) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	7arh:E	409	409	1.0000	1.0000	1.0000	0.0	7arl:E, 7mdx:B, 7v8l:E
2	7v8l:C	396	412	0.2689	0.2778	0.2670	8.11e-36	7arh:C, 7arj:C, 7arl:C, 7arm:C, 7mdx:A
3	5lil:A	615	254	0.1296	0.0862	0.2087	0.003	5lil:B, 5lj6:A, 5lj7:B
4	5lj7:A	592	207	0.1076	0.0743	0.2126	0.006
5	3wc3:A	435	60	0.0538	0.0506	0.3667	0.18	8ihw:A, 8ihx:A, 8ihy:A
6	7aih:Ar	195	38	0.0318	0.0667	0.3421	0.61	7am2:Ar, 7ane:Ar
7	6yxx:BR	196	37	0.0318	0.0663	0.3514	0.97	7aoi:BR, 6hiv:BR, 6hix:BR, 6yxy:BR
8	4c1w:A	188	37	0.0440	0.0957	0.4865	2.2	4c1x:A
9	4ol8:F	427	113	0.0733	0.0703	0.2655	2.9	4ol8:A
10	4fsp:A	364	96	0.0562	0.0632	0.2396	4.4
11	6x0o:A	1037	49	0.0367	0.0145	0.3061	5.3
12	1xvl:A	279	100	0.0636	0.0932	0.2600	5.4	4irm:A, 4irm:B, 3ujp:A, 3ujp:B, 3ujp:C, 1xvl:B
13	7bvc:B	1063	49	0.0367	0.0141	0.3061	5.5	7bvg:B, 7bwr:A
14	8csp:5	319	27	0.0318	0.0408	0.4815	9.7	6aax:A, 6aax:C, 6ajk:A, 8csq:5, 8csr:5, 8csu:5

[Back]