BioLiP

>protein
PKTQPKVIRFNGPSDVYVPPSKKTQKLLRSENLQNDLELQQFLRESHLLSAFNGIVYQDDQVIGKARSRTLEMRLNRLSR
VNGHQDKINKLEKVPMHIRRGMIDKHVKRIKKYEQEAAEGGIVLSKVKKGQFRKIESTYKKDIERRIGGSIKARDKEKAT
KRERGLKISSVGRSTRNGLIVSKRDIARIS

The query sequence (length=190) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	6ke6:RV	190	190	1.0000	1.0000	1.0000	3.12e-137	7ajt:JN, 6lqp:RV, 6lqq:RV, 6lqu:RV, 6zqa:JN, 6zqb:JN, 6zqc:JN
2	7suk:NE	163	189	0.8579	1.0000	0.8624	1.25e-106
3	5wlc:NE	158	141	0.6947	0.8354	0.9362	7.58e-92
4	6rxt:CU	176	127	0.2105	0.2273	0.3150	5.99e-09	5oql:0, 6rxu:CU, 6rxv:CU, 6rxx:CU
5	6rxy:CU	131	63	0.1158	0.1679	0.3492	6.72e-04	6rxz:CU
6	1c9w:A	315	44	0.0684	0.0413	0.2955	2.6	1frb:A
7	3r0x:A	438	56	0.1105	0.0479	0.3750	4.2
8	3wov:A	457	38	0.0789	0.0328	0.3947	4.9
9	4gq0:A	318	43	0.0684	0.0409	0.3023	5.0	4ga8:A, 4gab:A, 4gqg:A, 4i5x:A, 4icc:X, 4jih:A, 4jii:X, 5lik:X, 5liu:X, 5liw:X, 5lix:X, 5liy:X, 5m2f:X, 4wev:X, 4xzl:X, 4xzm:X, 4xzn:X, 5y7n:A, 1zua:X
10	8j4q:D	724	62	0.0947	0.0249	0.2903	6.1	8j4q:A, 8j4q:B, 8j4q:C, 8j4r:A, 8j4r:B, 8j4r:C, 8j4r:D, 6lfk:A, 6lfk:B, 6lfk:C, 6lfk:D
11	1afs:A	319	32	0.0526	0.0313	0.3125	6.5	1afs:B, 1lwi:A, 1lwi:B
12	2fvl:A	323	32	0.0579	0.0341	0.3438	9.8	2fvl:B, 2fvl:C

[Back]