Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM DMFold SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
>protein
PKIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHLRPKAMVSKGDLGLVIACL

The query sequence (length=61) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 8a3l:2 64 61 1.0000 0.9531 1.0000 2.40e-37 7abz:e, 7ac7:e, 7acj:e, 7acr:e, 5ady:3, 5afi:3, 5aka:3, 8akn:2, 8am9:2, 8ana:2, 8ap4:2, 9ax7:2, 9ax8:8, 8aye:2, 8b0x:2, 7b5k:3, 8b7y:l, 3bbx:3, 8bf7:d, 8bge:d, 8bgh:d, 8bh4:d, 8bhj:d, 8bhl:d, 8bhn:d, 8bhp:d, 8bil:d, 8bim:d, 7bl4:3, 7bl6:3, 6bu8:33, 7bv8:e, 6by1:C4, 6by1:D4, 6c4i:5, 8c8x:3, 8cam:2, 8ceu:2, 8cgd:2, 8cgk:2, 8cgv:2, 9cg5:2, 9cg6:2, 9cg7:2, 7cpj:3, 4csu:7, 7d6z:d, 7d80:1, 6dnc:IA, 8eiu:2, 8ekc:7, 8emm:2, 6enf:3, 6enj:3, 6enu:3, 9fbv:2, 8fiz:BO, 8fto:2, 8fzd:7, 8fze:7, 8fzf:7, 8fzg:7, 8fzh:7, 8fzi:7, 8fzj:7, 8g2u:3, 8g31:3, 8g34:3, 8g38:3, 8g6w:2, 8g6x:2, 8g6y:2, 8g7p:7, 8g7q:7, 8g7r:7, 8g7s:7, 5gad:e, 5gae:e, 5gaf:e, 5gag:e, 5gah:e, 6gbz:3, 6gc0:3, 6gc8:3, 6gwt:3, 6gxm:3, 6gxn:3, 6gxo:3, 6gxp:3, 6h4n:3, 5h5u:e, 6h58:3, 6h58:33, 6hrm:e, 8hsp:2, 8htz:2, 8hu1:2, 6i0y:3, 6i7v:D4, 6i7v:C4, 8ifb:2, 8ifc:2, 5iqr:e, 5it8:C4, 5it8:D4, 8j1z:2, 2j28:3, 3j5l:3, 5j5b:C4, 5j5b:D4, 3j7z:3, 5j7l:C4, 5j7l:D4, 3j8g:7, 5j88:C4, 5j88:D4, 5j8a:C4, 5j8a:D4, 3j9y:3, 3j9z:L4, 5j91:C4, 5j91:D4, 3ja1:L6, 3jbu:7, 3jbv:7, 3jcd:3, 3jce:3, 3jcj:c, 3jcn:3, 5jc9:C4, 5jc9:D4, 7jss:E, 7jsw:E, 7jsz:E, 5jte:B3, 7jt1:E, 7jt2:E, 7jt3:E, 5ju8:B3, 7k00:2, 7k50:E, 7k51:E, 7k52:E, 7k53:E, 7k54:E, 7k55:E, 5kcr:18, 5kcs:18, 5kps:5, 5kpv:4, 5kpw:4, 5kpx:4, 5l3p:8, 6lkq:l, 7lv0:E, 7lvk:l, 5lza:3, 5lzb:3, 5lzc:3, 5lzd:3, 5lze:3, 5lzf:3, 7m5d:e, 5mdv:e, 5mdw:e, 5mdy:e, 5mdz:e, 5mgp:3, 7n1p:Li, 7n2c:Li, 7n2u:Li, 7n2v:Li, 7n30:Li, 7n31:Li, 7nbu:2, 5nco:e, 5np6:1, 7nso:3, 7nsp:3, 7nsq:3, 5nwy:q, 7nwt:e, 7nww:d, 7o19:B3, 7o1a:B3, 7o1c:B3, 5o2r:3, 6o9j:4, 6o9k:8, 6ofx:E, 6og7:E, 6ogf:E, 6ogg:E, 6ogi:E, 7oif:d, 7oig:d, 7oii:d, 7oiz:2, 7oj0:2, 6om6:e, 6ore:e, 6orl:e, 6osk:e, 6osq:e, 6ost:e, 6ot3:e, 7ot5:d, 7otc:3, 6ouo:e, 8p16:e, 8p17:e, 8p18:e, 7p3k:2, 8peg:6, 8phj:2, 6pj6:l, 7pjs:3, 7pjt:3, 7pju:3, 7pjv:3, 7pjw:3, 7pjx:3, 7pjy:3, 7pjz:3, 8pkl:6, 8pva:2, 7q4k:B3, 8q4f:2, 6q97:e, 6q98:e, 6q9a:e, 8qbt:d, 6qdw:7, 7qg8:q, 7qgh:q, 7qgn:q, 7qgr:q, 8qk7:e, 8qoa:2, 7qq3:l, 6qul:e, 8r3v:62, 8r6c:2, 8r8m:2, 8rcl:62, 8rcm:62, 8rcs:62, 8rct:62, 8rpy:3, 8rpz:3, 8rq0:3, 8rq2:3, 6s0k:e, 7s1g:l, 7s1h:l, 7s1i:l, 7s1j:l, 7s1k:l, 7sa4:e, 7ss9:E, 7ssd:E, 7ssl:E, 7ssn:E, 7sso:E, 7ssw:E, 7st2:E, 7st6:E, 7st7:E, 8syl:7, 6szs:3, 8t5d:3, 8t5h:3, 6tbv:L351, 6tc3:L351, 7tos:L35, 4u1u:B3, 4u1u:D3, 4u1v:B3, 4u1v:D3, 4u20:B3, 4u20:D3, 4u24:B3, 4u24:D3, 4u25:B3, 4u25:D3, 4u26:B3, 4u26:D3, 4u27:B3, 4u27:D3, 5u4i:4, 6u48:C4, 5u9f:33, 5u9g:33, 7ug7:Li, 7uph:l, 8upo:o, 8upr:o, 8uql:o, 8uqm:o, 8uqp:o, 8ur0:o, 8urh:o, 8uri:o, 8urx:o, 8ury:o, 4uy8:3, 5uyk:33, 5uyl:33, 5uym:33, 5uyn:33, 5uyp:33, 5uyq:33, 4v4h:B3, 4v4h:D3, 4v4q:B3, 4v4q:D3, 4v50:B3, 4v50:D3, 4v52:B3, 4v52:D3, 4v53:B3, 4v53:D3, 4v54:B3, 4v54:D3, 4v55:B3, 4v55:D3, 4v56:B3, 4v56:D3, 4v57:B3, 4v57:D3, 4v5b:A3, 4v5b:C3, 4v5h:B7, 4v5y:B3, 4v5y:D3, 4v64:B3, 4v64:D3, 4v65:BW, 4v66:BW, 4v69:B3, 4v6c:B3, 4v6c:D3, 4v6d:B3, 4v6d:D3, 4v6e:B3, 4v6e:D3, 4v6k:Af, 4v6l:Bf, 4v6m:B3, 4v6n:A6, 4v6o:B6, 4v6p:B6, 4v6q:B6, 4v6r:B6, 4v6s:A6, 4v6t:B3, 4v6v:B8, 4v6y:B3, 4v6z:B3, 4v70:B3, 4v71:B3, 4v72:B3, 4v73:B3, 4v74:B3, 4v75:B3, 4v76:B3, 4v77:B3, 4v78:B3, 4v79:B3, 4v7a:B3, 4v7b:B3, 4v7c:B6, 4v7d:A7, 4v7i:A3, 4v7s:B3, 4v7s:D3, 4v7t:B3, 4v7t:D3, 4v7u:B3, 4v7u:D3, 4v7v:B3, 4v7v:D3, 4v85:B7, 4v89:B7, 4v9c:B3, 4v9c:D3, 4v9d:C3, 4v9d:D3, 4v9o:A3, 4v9o:C3, 4v9o:E3, 4v9o:G3, 4v9p:A3, 4v9p:C3, 4v9p:E3, 4v9p:G3, 8vs9:L35, 8vsa:L35, 6vu3:o, 6vwl:AB, 6vwm:AB, 6vwn:AB, 6vyq:o, 6vyr:o, 6vys:o, 6vyt:o, 6vyu:o, 6vyw:o, 6vyx:o, 6vyy:o, 6vyz:o, 6vz2:o, 6vz3:o, 6vz5:o, 6vz7:o, 6vzj:o, 8w51:4, 5wdt:3, 6wd0:E, 6wd1:E, 6wd2:E, 6wd3:E, 6wd4:E, 6wd5:E, 6wd6:E, 6wd7:E, 6wd8:E, 6wd9:E, 6wda:E, 6wdb:E, 6wdc:E, 6wdd:E, 6wde:E, 6wdf:E, 6wdg:E, 6wdh:E, 6wdi:E, 6wdj:E, 6wdk:E, 6wdl:E, 6wdm:E, 5we4:3, 5we6:3, 4wf1:B3, 4wf1:D3, 5wf0:3, 5wfk:3, 5wfs:3, 6wnt:E, 6wnv:E, 6wnw:E, 4woi:B3, 4woi:C3, 4www:R3, 4www:Y3, 6x6t:o, 6x7f:o, 6x7k:o, 6x9q:o, 6xdq:o, 6xdr:o, 6xgf:o, 6xii:o, 6xij:o, 6xz7:d, 6xza:d2, 6xzb:d2, 6y69:3, 7y7c:2, 7y7d:2, 7y7e:2, 7y7f:2, 7y7g:2, 7y7h:2, 4ybb:C4, 4ybb:D4, 7yla:l, 6ys3:7, 6ysr:3, 6yss:3, 6yst:3, 6ysu:3, 7z20:7, 7zod:7, 7zp8:7, 7zq5:7, 7zq6:7, 6ztj:B5, 6ztl:B5, 6ztm:B5, 6ztn:B5, 6zto:B5, 6ztp:B5, 7zta:L351, 6zu1:B5
2 8cd1:5 63 61 0.6066 0.5873 0.6066 2.04e-15 6spb:5, 6spd:5, 6spf:5, 6spg:5, 7unr:7, 7unu:7, 7unv:7, 7unw:7
3 8buu:3 65 61 0.5082 0.4769 0.5082 3.01e-13 7aqc:e, 7aqd:e, 7as8:i, 7as9:i, 6ha1:3, 6ha8:3, 6htq:4, 3j9w:B7, 5njt:s, 7o5b:3, 7ope:i, 8qcq:3, 7qgu:e, 7qh4:e, 8qpp:3, 7qv1:3, 7qv2:3, 7qv3:3, 8r55:3, 8s1p:3, 8s1u:3, 6tnn:s, 6tpq:s
4 8uu9:7 65 54 0.4754 0.4462 0.5370 7.72e-13 8a57:8, 8a5i:8, 8a63:8, 7nhn:8, 8uu4:7, 8uu5:7, 8uu6:7, 8uu7:7, 8uu8:7, 8uua:7
5 7m4v:2 63 56 0.5410 0.5238 0.5893 3.19e-11 7m4w:2, 7m4x:2, 7m4y:2, 7m4z:2, 7ryf:2, 7ryg:2, 7ryh:2, 7uvv:2, 7uvw:2, 7uvx:2, 7uvy:2, 7uvz:2, 7uw1:2, 6v39:2, 6v3a:2, 6v3b:2, 6v3d:2, 6yhs:a, 6ysi:a
6 5nrg:3 65 61 0.4754 0.4462 0.4754 7.85e-11 7asm:3, 7asn:3, 7aso:j, 7asp:2, 6ddd:Q, 6ddg:Q, 6fxc:A3, 6fxc:B3, 5hkv:3, 5hl7:3, 6hma:3, 5li0:7, 5nd8:7, 5nd9:7, 5ngm:A3, 7nhl:8, 7nhm:8, 8p2f:8, 8p2g:8, 8p2h:8, 7p48:3, 6s0x:3, 6s0z:3, 6s12:3, 6s13:3, 6sj6:7, 5t7v:LH, 5tcu:LH, 7ttu:Q, 7ttw:Q, 4wce:3, 4wf9:3, 4wfa:3, 4wfb:3, 6wqn:Q, 6wqq:Q, 6wrs:Q, 6wru:Q, 8y36:3, 8y37:3, 8y38:3, 8y39:3, 6yef:7
7 8rd8:dh 64 56 0.5246 0.5000 0.5714 8.10e-11 8rdv:dh, 8rdw:dh
8 5myj:B7 64 54 0.4590 0.4375 0.5185 1.84e-10
9 7jil:e 64 53 0.4918 0.4688 0.5660 3.53e-09
10 8fmw:Ag 66 49 0.4262 0.3939 0.5306 5.60e-09 8fn2:g
11 6dzi:e 63 53 0.4262 0.4127 0.4906 9.76e-09 6dzp:e, 8fr8:x, 8kab:e, 5o60:e, 5o61:e, 7s0s:f, 8v9j:7, 8v9k:7, 8v9l:7, 8whx:8, 8why:8, 8wi7:8, 8wi8:8, 8wib:8, 8wic:8, 7xam:e, 5xym:3, 8xz3:e, 7y41:e, 5zeb:6, 5zep:3, 5zet:6
12 7f0d:3 62 61 0.4098 0.4032 0.4098 3.79e-08 7kgb:3, 7msc:3, 7msh:3, 7msm:3, 7msz:3, 7mt2:3, 7mt3:3, 7mt7:3, 7sfr:3, 5v7q:3, 5v93:3
13 7nhk:7 64 54 0.4426 0.4219 0.5000 4.98e-08 6o8w:5, 6o8x:5, 6o8y:5, 6o8z:5, 6o90:5, 7p7q:7, 7p7r:7, 7p7s:7, 7p7t:7, 7p7u:7, 6w6p:5, 6wu9:5
14 6eri:Ad 72 60 0.4262 0.3611 0.4333 2.42e-07 5h1s:e, 5mlc:5, 5mmi:4, 5mmm:4, 4v61:B5, 5x8p:4, 5x8t:4
15 7ood:1 59 52 0.3934 0.4068 0.4615 1.28e-06 7p6z:1, 7pah:1, 7pai:1, 7paj:1, 7pak:1, 7pal:1, 7pam:1, 7pan:1, 7pao:1, 7paq:1, 7par:1, 7pas:1, 7pat:1, 7pau:1, 7ph9:1, 7pha:1, 7phb:1, 7phc:1, 7pi8:1, 7pi9:1, 7pia:1, 7pib:1, 7pic:1, 7pio:1, 7pip:1, 7piq:1, 7pir:1, 7pis:1, 7pit:1
16 9c4g:2 67 57 0.3443 0.3134 0.3684 0.001 8crx:2, 8cvm:2
17 7nac:R 134 36 0.2131 0.0970 0.3611 3.4 6elz:R, 6em5:R, 7nad:R, 7naf:R, 7ohr:R, 7r72:R, 7r7a:R, 8v87:R
18 4tvf:A 352 24 0.1803 0.0312 0.4583 4.2
19 6l8u:C 229 23 0.1639 0.0437 0.4348 4.7 6l8u:A, 6l8u:B, 6l8u:D
20 6fsh:D 382 24 0.1803 0.0288 0.4583 5.1 6fsh:A, 6fsh:B, 6fsh:C, 4tx3:A
21 8yk5:A 664 21 0.1803 0.0166 0.5238 5.2 8yk5:B
22 7b81:A 256 16 0.1475 0.0352 0.5625 5.5 7b81:B, 7do6:A, 7do6:B, 7do6:C, 7do6:D, 7do6:E, 7do6:F, 7do6:G, 7do6:H, 7do7:A, 7do7:B
23 4v6i:BT 189 36 0.2131 0.0688 0.3611 6.8 8aaf:E, 8agt:E, 8agu:E, 8agv:E, 8agw:E, 8agx:E, 8agz:E, 5apn:R, 5apo:R, 7azy:H, 7b7d:Ln, 8bip:LR, 8bjq:LR, 8bn3:M9, 8bqd:BF, 8bqx:BF, 7bt6:R, 7btb:R, 8ccs:D, 8cdl:D, 8cdr:D, 8ceh:D, 8cf5:D, 8cg8:D, 8cgn:D, 8civ:D, 8cku:D, 8cmj:D, 5dat:M9, 5dat:m9, 5dc3:M9, 5dc3:m9, 5dge:M9, 5dge:m9, 5dgf:M9, 5dgf:m9, 5dgv:M9, 5dgv:m9, 8eub:AR, 8evp:AR, 8evq:AR, 8evr:AR, 8evs:AR, 8evt:AR, 8ewb:AR, 8ewc:AR, 5fci:M9, 5fci:m9, 5fcj:M9, 5fcj:m9, 6ft6:R, 5gak:T, 6gq1:R, 6gqb:R, 6gqv:R, 5h4p:R, 6hd7:T, 8hfr:RP, 6hhq:z, 6hhq:CT, 5i4l:M9, 5i4l:m9, 6i7o:BF, 6i7o:YF, 3j6x:59, 3j6y:59, 3j77:69, 3j78:69, 3jct:R, 5jcs:R, 5juo:W, 5jup:W, 5jus:W, 5jut:W, 5juu:W, 8k2d:LR, 8k82:LR, 5lyb:M9, 5lyb:m9, 5m1j:R5, 6m62:R, 5mc6:BF, 5mei:z, 5mei:CT, 7mpi:AR, 7mpj:AR, 6n8j:R, 6n8k:R, 6n8l:R, 6n8m:e, 6n8n:e, 6n8o:e, 7n8b:AR, 5ndg:M9, 5ndg:m9, 5ndv:M9, 5ndv:m9, 5ndw:M9, 5ndw:m9, 7nrc:LT, 7nrd:LT, 5obm:M9, 5obm:m9, 7of1:R, 7oh3:R, 7ohq:R, 6oig:R, 5on6:z, 5on6:CT, 7osa:eL19, 7osm:eL19, 8p8m:QQ, 8p8n:QQ, 8p8u:QQ, 8pfr:QQ, 6q8y:BF, 6qik:R, 6qt0:R, 6qtz:R, 6r84:T, 6r86:T, 6r87:T, 6ri5:R, 7rr5:LR, 6rzz:R, 6s05:R, 6s47:AT, 6snt:x, 6sv4:BF, 6sv4:YF, 6sv4:ZF, 6t4q:LR, 5t62:e, 5t6r:e, 6t7i:LR, 6t7t:LR, 6t83:Ry, 6t83:C, 5tbw:z, 5tbw:CT, 6tb3:BF, 5tga:M9, 5tga:m9, 5tgm:M9, 5tgm:m9, 6tnu:BF, 7too:AL19, 7top:AL19, 7u0h:R, 4u3m:M9, 4u3m:m9, 4u3n:M9, 4u3n:m9, 4u3u:M9, 4u3u:m9, 4u4n:M9, 4u4n:m9, 4u4o:M9, 4u4o:m9, 4u4q:M9, 4u4q:m9, 4u4r:M9, 4u4r:m9, 4u4u:M9, 4u4u:m9, 4u4y:M9, 4u4y:m9, 4u4z:M9, 4u4z:m9, 4u50:M9, 4u50:m9, 4u51:M9, 4u51:m9, 4u52:M9, 4u52:m9, 4u53:M9, 4u53:m9, 4u55:M9, 4u55:m9, 4u56:M9, 4u56:m9, 4u6f:M9, 4u6f:m9, 7ug6:R, 7uoo:R, 7uqb:R, 7uqz:R, 7v08:R, 4v4b:BP, 4v7f:R, 4v7r:BS, 4v7r:DS, 4v88:BR, 4v88:DR, 4v8t:R, 4v8y:BR, 4v8z:BR, 4v91:R, 6woo:R, 2ww9:J, 2wwa:J, 2wwb:J, 6xiq:R, 6xir:R, 8y0u:LR, 6ylg:R, 6ylh:R, 6ylx:R, 6yly:R, 7z34:R, 6z6j:LR, 6z6k:LR, 7zpq:BQ, 7zrs:BQ, 7zs5:BS, 7zuw:BQ, 7zux:EQ, 7zw0:LU
24 9csi:A 569 28 0.1803 0.0193 0.3929 7.0 8gk7:A, 8gk7:B, 7met:A
25 4if2:A 324 32 0.1803 0.0340 0.3438 7.5

[Back]

Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218