BioLiP

>protein
PKGTIYLTFSDGPVNASVEVIKVLNQGGVKATFYFNAWHLDGIGDENEDRALEALKLALDSGHIVGNHSYDHMIHNCVEE
FGPTSGADCNATGNHQIHSYQDPVRDAASFEQNLITLEKYLPTIRSYPNYKGYELARLPYTNGWRVTKHFQADGLCATSD
NLKPWEPGYVCDPANPSNSVKASIQVQNILANQGYQTHGWDVDWAPENWGIPMPANSLTEAVPFLAYVDKALNSCSPTTI
EPINSKTQEFPCGTPLHADKVIVLTHDFLFEDGKRGMGATQNLPKLAEFIRIAKEAGYVFDTMDNYTPRWSVGKTYQAGE
YVLYQGVVYKAVISHTAQQDWAPSSTSSLWTNADPATNWTLNVSYEQGDIVNYKGKRYLVSVPHVSQQDWTPDTQNTLFT
ALE

The query sequence (length=403) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	4nyu:A	406	403	0.9975	0.9901	0.9975	0.0	4ny2:A, 4ny2:B, 4nyy:A, 4nyy:B, 4nyy:C, 4nyy:D, 4nz1:A, 4nz1:B, 4nz3:A, 4nz3:B, 4nz4:A, 4nz4:B, 4oui:A, 4oui:B
2	3wx7:A	402	401	0.8164	0.8184	0.8204	0.0	3wx7:B
3	5o6y:A	214	72	0.0620	0.1168	0.3472	2.80e-05	5o6y:B, 5o6y:C, 5o6y:D
4	2iw0:A	226	73	0.0571	0.1018	0.3151	1.08e-04
5	7ax7:A	205	95	0.0744	0.1463	0.3158	1.14e-04
6	7bly:A	216	69	0.0521	0.0972	0.3043	3.68e-04
7	2y8u:B	212	70	0.0596	0.1132	0.3429	5.97e-04	2y8u:A
8	2c1g:A	384	74	0.0670	0.0703	0.3649	5.97e-04	2c1i:A
9	2c71:A	205	89	0.0720	0.1415	0.3258	7.59e-04	2c79:A
10	2j13:A	207	125	0.0893	0.1739	0.2880	0.002
11	8he1:A	225	74	0.0521	0.0933	0.2838	0.005	8he2:A, 8he4:A, 8hf9:A
12	2cc0:A	192	70	0.0521	0.1094	0.3000	0.005	2cc0:B
13	4tx8:A	374	46	0.0422	0.0455	0.3696	0.006
14	4tx8:A	374	44	0.0347	0.0374	0.3182	5.6
15	5n1j:A	206	71	0.0620	0.1214	0.3521	0.008	5n1j:B, 5n1j:C, 5n1j:D, 5n1p:A, 5n1p:D, 5n1p:B, 5n1p:C, 5nc6:A, 5nc6:B, 5nc6:C, 5nc6:D, 5nc9:A, 5nc9:B, 5nc9:C, 5nc9:D, 5ncd:A, 5ncd:B, 5ncd:C, 5ncd:D, 5nek:A, 5nek:B, 5nek:C, 5nek:D, 5nel:A, 5nel:B, 5nel:C, 5nel:D
16	2w3z:A	238	70	0.0546	0.0924	0.3143	0.009
17	8hfa:A	212	69	0.0521	0.0991	0.3043	0.018	8hfa:B, 8hfa:C, 8hfa:D, 8hfa:E
18	5jmu:A	220	68	0.0620	0.1136	0.3676	0.023
19	2vyo:A	206	34	0.0372	0.0728	0.4412	0.62
20	6iiy:A	237	63	0.0596	0.1013	0.3810	1.00
21	3idv:A	235	64	0.0521	0.0894	0.3281	1.4
22	5izm:B	495	71	0.0471	0.0384	0.2676	1.4	5izk:A, 5izm:A
23	3dff:A	266	65	0.0620	0.0940	0.3846	1.4	3dfk:A, 3dfm:A, 2x9l:A, 2xad:A, 2xad:B, 2xad:C, 2xad:D
24	5izk:B	451	71	0.0471	0.0421	0.2676	1.6
25	7zjw:E	519	71	0.0471	0.0366	0.2676	2.1	5izl:A, 5izl:B
26	5jp6:A	339	69	0.0471	0.0560	0.2754	2.2
27	3eo7:A	487	39	0.0397	0.0329	0.4103	3.1
28	3rss:A	494	44	0.0447	0.0364	0.4091	6.1	2ax3:A, 3rrb:A, 3rre:A, 3rrf:A, 3rrj:A, 3rs8:A, 3rs9:A, 3rsf:A, 3rsg:A, 3rsq:A, 3rt7:A, 3rt9:A, 3rta:A, 3rtb:A, 3rtc:A, 3rtd:A, 3rte:A, 3rtg:A, 3ru2:A, 3ru3:A
29	3ele:A	398	77	0.0496	0.0503	0.2597	9.2	3ele:B, 3ele:C, 3ele:D

[Back]