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BioLiP
>protein
PIVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHA
GPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRF
YKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPGATLEEMMTACQGV

The query sequence (length=213) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8eep:A 221 212 0.9812 0.9457 0.9858 9.75e-158 6axv:A, 6ay9:A, 6aya:A, 4b4n:A, 8cky:A, 8cl0:A, 8cl0:F, 8cl0:B, 8cl0:C, 8cl0:D, 8cl0:E, 8cl1:A, 8cl3:A, 3ds0:A, 3ds1:A, 3ds3:A, 3ds3:B, 3ds4:A, 4e91:A, 4e91:B, 4e92:A, 4e92:B, 8ejl:L, 8ejl:M, 8f22:A, 8f22:F, 8f22:B, 8f22:C, 8f22:D, 8f22:E, 8fiu:A, 8fiu:B, 8fiu:C, 8gdv:A, 8gdv:F, 8gdv:C, 8gdv:D, 8gdv:E, 5hgl:A, 5hgl:B, 5hgl:C, 5hgl:D, 5hgl:E, 5hgl:F, 4inb:A, 4j93:A, 2jpr:A, 7m9f:A, 7mkc:A, 3nte:A, 3nte:B, 4nx4:C, 6pu1:A, 4qnb:A, 8qub:A, 8quh:A, 8qui:A, 8quj:A, 8quk:A, 8qul:A, 8quw:A, 8qux:A, 8quy:A, 8qv1:A, 8qv4:A, 8qv9:A, 8qva:A, 7rhn:C, 7rj2:C, 7rj4:A, 7rj4:B, 7rj4:C, 7rmj:A, 7rmj:B, 7rmj:C, 7snl:A, 7snn:A, 7snq:A, 7snq:F, 7snq:B, 7snq:C, 7snq:D, 7snq:E, 7snq:G, 7snq:L, 7snq:H, 7snq:I, 7snq:J, 7snq:K, 8tov:G, 8tov:J, 8tov:I, 8tov:K, 8tov:L, 8tov:H, 8tov:A, 8tov:C, 8tov:B, 8tov:D, 8tov:E, 8tov:F, 8tqp:A, 8tqp:D, 8tqp:B, 8tqp:C, 8tqp:E, 8tqp:F, 8tqp:G, 8tqp:J, 8tqp:I, 8tqp:K, 8tqp:L, 8tqp:H, 5tsv:A, 5tsv:B, 5tsx:A, 5tsx:D, 5tsx:B, 5tsx:C, 5tsx:J, 5tsx:L, 5tsx:I, 5tsx:K, 5tsx:E, 5tsx:H, 5tsx:F, 5tsx:G, 4u0a:A, 4u0b:A, 4u0b:B, 4u0b:D, 4u0b:F, 4u0b:L, 4u0b:H, 4u0b:I, 4u0c:A, 4u0d:A, 4u0d:F, 4u0d:G, 4u0d:H, 4u0d:B, 4u0d:C, 4u0d:J, 4u0e:A, 4u0f:A, 7urn:A, 6v2f:A, 6v2f:B, 6v2f:C, 6v2f:D, 6v2f:E, 6v2f:F, 6vkv:A, 6vkv:B, 6vkv:C, 4wym:A, 4wym:F, 4wym:B, 4wym:C, 4wym:D, 4wym:E, 4wym:G, 4wym:H, 4wym:I, 4wym:J, 4wym:K, 4wym:L, 2xde:A, 2xde:B, 4xfz:A, 4xrq:A, 2xxm:A, 7zud:A
2 4u0b:C 198 211 0.8732 0.9394 0.8815 5.60e-133 8gdv:B, 4u0b:E, 4u0b:G, 4u0b:J, 4u0b:K, 4u0d:I
3 6rwg:A 157 78 0.3568 0.4841 0.9744 6.46e-51 1a1t:A, 1aaf:A, 1bj6:A, 2buo:A, 1esk:A, 2exf:A, 1f6u:A, 5i1r:A, 2jzw:A, 2l4l:A, 2m3z:A, 1mfs:A, 1q3y:A, 1q3z:A, 7r7p:I, 7r7p:L
4 2l6e:A 94 74 0.3333 0.7553 0.9595 2.74e-47
5 8a22:Bj 401 120 0.1408 0.0748 0.2500 1.4 8apn:Bj, 8apo:Bj
6 6orr:C 273 59 0.0704 0.0549 0.2542 1.4 7bkg:A, 7bkg:B, 7bkg:C, 7bkg:D, 7ble:A, 7ble:B, 7ble:C, 7ble:D, 6chh:A, 6chh:B, 6chh:C, 6chh:D, 7egu:A, 7ehz:A, 7ei2:A, 7et7:A, 7et7:B, 7et7:C, 7et7:D, 7eu5:A, 7eu5:B, 7eu5:C, 7eu5:D, 2iip:A, 2iip:B, 2iip:C, 2iip:D, 7nbj:A, 7nbj:B, 7nbj:C, 7nbj:D, 7nbm:A, 7nbm:B, 7nbm:C, 7nbm:D, 7nbq:A, 7nbq:B, 7nbq:C, 7nbq:D, 6orr:A, 6orr:B, 6orr:D, 6pve:A, 6pve:B, 6pve:C, 6pve:D, 6pvs:A, 6pvs:B, 6pvs:C, 6pvs:D, 7rkk:A, 7rkk:B, 7rkl:A, 7rkl:B, 7rkl:C, 7rkl:D, 3rod:A, 3rod:B, 3rod:C, 3rod:D, 7sok:C, 7sok:A, 7sok:B, 7sok:D, 7wmc:A, 7wmc:B, 7wmt:A, 5xvq:A, 5xvq:B, 5yjf:A, 5yjf:B, 5yjf:C, 5yjf:D
7 6tz8:D 373 39 0.0563 0.0322 0.3077 2.7 6tz8:A
8 8i2r:A 477 51 0.0657 0.0294 0.2745 6.1 6m0e:A
9 7rqu:A 604 72 0.0986 0.0348 0.2917 6.3 5irx:A, 5irx:B, 5irx:D, 5irx:C, 5irz:D, 5irz:E, 5irz:B, 5irz:C, 5is0:C, 5is0:B, 5is0:D, 5is0:E, 7l2l:A, 7l2l:D, 7l2l:C, 7l2l:B, 7l2m:A, 7l2m:C, 7l2m:D, 7l2m:B, 7l2n:A, 7l2n:D, 7l2n:C, 7l2n:B, 7l2o:A, 7l2o:C, 7l2o:D, 7l2o:B, 7lpa:A, 7lpa:B, 7lpa:D, 7lpa:C, 7lpb:A, 7lpb:B, 7lpb:C, 7lpb:D, 7lpc:C, 7lpc:A, 7lpc:B, 7lpc:D, 7lpd:A, 7lpd:B, 7lpd:C, 7lpd:D, 7lpe:C, 7lpe:B, 7lpe:A, 7lpe:D, 7mz5:A, 7mz5:D, 7mz5:C, 7mz5:B, 7rqu:C, 7rqu:B, 7rqu:D, 7rqv:A, 7rqv:D, 7rqv:C, 7rqv:B, 7rqx:A, 7rqx:C, 7rqx:D, 7rqx:B, 8t0y:B, 8t0y:A, 8t0y:D, 8t0y:C, 8t10:B, 8t10:A, 8t10:D, 8t10:C, 8t3l:A, 8t3l:D, 8t3l:B, 8t3l:C, 8t3m:A, 8t3m:D, 8t3m:C, 8t3m:B, 8u2z:A, 8u2z:D, 8u2z:B, 8u2z:C
10 7vuk:B 472 69 0.0845 0.0381 0.2609 7.1
11 7vuk:A 421 69 0.0845 0.0428 0.2609 8.1
12 6gsn:q 675 68 0.0939 0.0296 0.2941 9.3 8cah:q, 8cas:q, 6gsm:q, 8s8e:p, 4uer:c, 6zce:q, 6zu9:q

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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