BioLiP

>protein
PGIRGPSEYSQEPPRHPSLKVNAKEPFNAEPPRSALVSSYVTPVDLFYKRNHGPIPIVDHLQSYSVTLTGLIQNPRKLFI
KDIRSLPKYNVTATLQCAGNRRTAMSKVRNVRGVGWDVSAIGNAVWGGAKLADVLELVGIPKLTASTNLGARHVEFVSVD
RCKEENGGPYKASITLSQATNPEADVLLAYEMNGETLNRDHGFPLRVVVPGVIGARSVKWLDSINVIAEESQGFFMQKDY
KMFPPSVNWDNINWSSRRPQMDFPVQSAICSVEDVQMVKPGKVSIKGYAVSGGGRGIERVDISLDGGKNWVEASRTQEPG
KQYISEHSSSDKWAWVLFEATIDVSQTTEVIAKAVDSAANVQPENVESVWNLRGVLNTSWHRVLLRLG

The query sequence (length=388) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	1ogp:A	388	388	1.0000	1.0000	1.0000	0.0	1ogp:B, 1ogp:C, 1ogp:D, 1ogp:E, 1ogp:F
2	1sox:A	463	381	0.4768	0.3996	0.4856	2.86e-108	2a9a:A, 2a9a:B, 2a9b:A, 2a9c:A, 2a9c:B, 2a9d:A, 2a9d:B, 3hbp:A, 3hbq:A, 1sox:B
3	3hbg:A	353	382	0.4613	0.5071	0.4686	6.54e-97
4	2bih:A	453	393	0.3170	0.2715	0.3130	8.81e-59	2bii:A, 2bii:B
5	2blf:A	373	372	0.2912	0.3029	0.3038	6.39e-37	2bpb:A, 2c9x:A, 2ca3:A, 2ca4:A
6	6y0k:AAA	377	380	0.2603	0.2679	0.2658	2.44e-32
7	4pw3:A	365	369	0.2629	0.2795	0.2764	3.74e-31	5k3x:A, 5k3x:B, 4pw3:B, 4pw3:C, 4pw3:D, 4pw9:A, 5wa0:A, 5wa0:B, 5wa0:C, 5wa0:D
8	2xts:A	389	337	0.2345	0.2339	0.2700	4.02e-22	2xts:C
9	1xdq:C	264	61	0.0464	0.0682	0.2951	1.3	1xdq:A, 1xdq:B, 1xdq:D, 1xdq:E
10	6u3f:A	293	28	0.0335	0.0444	0.4643	7.1	6u3y:A
11	6xzd:BP1	712	39	0.0309	0.0169	0.3077	9.8	6xzp:BP1, 6xzq:B, 6xzr:BP1, 6y0c:B

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