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BioLiP
>protein
PEPEGPVAHRLAAVAAAIDHKLNIRKRGISGQMRDPSLLTFQRERVVVLSGQRFNVTVDPDGDDLLVTFDDGTTAPVRSA
WRPGAPVWSGTVGDQSVAIQVRPLLNGVFLQHAGAAAEARVFTRREAELADLMPVKENAGSGKQLLCPMPGLVKQIMVSE
GQEVKNGEPLAIVEAMKMENVLRAERDGTISKIAAKEGDSLAVDAVILEF

The query sequence (length=210) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8pn8:G 213 210 1.0000 0.9859 1.0000 3.02e-153 8pn7:G, 8pn7:H, 8pn7:I, 8pn7:J, 8pn7:K, 8pn7:L, 8pn8:H, 8pn8:I, 8pn8:J, 8pn8:K, 8pn8:L, 6ybq:G, 6ybq:H, 6ybq:I, 6ybq:J, 6ybq:K, 6ybq:L
2 3n6r:A 591 187 0.3952 0.1404 0.4439 1.95e-39 3n6r:C, 3n6r:E
3 3n6r:G 646 187 0.3952 0.1285 0.4439 3.33e-39 3n6r:I, 3n6r:K
4 7ybu:A 670 142 0.1952 0.0612 0.2887 2.81e-14 7ybu:B, 7ybu:D, 7ybu:F, 7ybu:H, 7ybu:J
5 8sgx:X 657 131 0.1857 0.0594 0.2977 1.17e-13 8sgx:S, 8sgx:Z, 8sgx:V, 8sgy:V, 8sgy:B, 8sgy:S, 8sgy:Z, 8sgy:Y, 8sgz:V, 8sgz:Z, 8sgz:X, 8sgz:S, 8sgz:B, 8sgz:Y
6 4hnv:B 1033 61 0.1238 0.0252 0.4262 1.04e-09 8gk8:D
7 3bg5:B 1074 61 0.1238 0.0242 0.4262 1.05e-09 3bg5:D, 8gk8:C, 3hb9:B, 3hb9:D, 3hbl:B, 3hbl:D, 4hnt:B, 4hnt:D, 4hnu:B, 4hnu:D, 4hnv:D, 3ho8:A, 3ho8:C, 3ho8:B
8 3bg5:A 1137 61 0.1238 0.0229 0.4262 1.14e-09 3bg5:C, 8gk8:A, 8gk8:B, 3hb9:A, 3hb9:C, 3hbl:A, 3hbl:C, 4hnt:A, 4hnt:C, 4hnu:A, 4hnu:C, 4hnv:A, 4hnv:C
9 2ejf:C 69 64 0.1190 0.3623 0.3906 1.64e-09
10 4qsh:C 1081 61 0.1238 0.0241 0.4262 4.35e-09 4qsh:A, 4qsh:D, 4qsh:B, 4qsk:A, 4qsk:B
11 8jxn:J 541 65 0.1095 0.0425 0.3538 3.73e-08
12 8j78:I 651 65 0.1095 0.0353 0.3538 4.03e-08 8j78:C, 8j7d:D, 8j7d:F, 8j7d:I, 8j7d:L, 8jaw:A, 8jaw:C, 8jaw:E, 8jaw:F, 8jaw:H, 8jaw:K, 8k2v:A, 8k2v:B, 8k2v:C, 8k2v:D, 8k2v:E, 8k2v:F
13 5ks8:F 482 62 0.1143 0.0498 0.3871 4.81e-08
14 5ks8:D 580 62 0.1143 0.0414 0.3871 4.90e-08
15 5ks8:C 603 62 0.1143 0.0398 0.3871 4.91e-08
16 8hwl:A 941 66 0.1286 0.0287 0.4091 5.67e-08 8hwl:B, 8hwl:C, 8hwl:E
17 7wtb:B 1147 66 0.1286 0.0235 0.4091 5.78e-08 3bg3:A, 3bg3:B, 3bg3:C, 3bg3:D, 3bg9:A, 3bg9:B, 3bg9:C, 3bg9:D, 8j7o:A, 8j7o:B, 8j7o:C, 8j7o:E, 7wta:C, 7wta:B, 7wta:D, 7wta:A, 7wtb:C, 7wtb:A, 7wtb:D, 7wtc:C, 7wtc:A, 7wtc:B, 7wtc:D, 7wtd:C, 7wtd:D, 7wte:C, 7wte:D
18 5vyz:C 1083 94 0.1381 0.0268 0.3085 1.02e-07 5vyw:A, 5vyw:B, 5vyw:C, 5vz0:C
19 5vyz:A 1144 94 0.1381 0.0253 0.3085 1.13e-07 5vyw:D, 5vyz:B, 5vyz:D, 5vz0:A, 5vz0:B, 5vz0:D, 7zyy:A, 7zyy:C, 7zyy:B, 7zyy:D, 7zyz:A, 7zz0:A, 7zz1:A, 7zz2:A, 7zz3:A, 7zz3:C, 7zz3:B, 7zz3:D, 7zz4:A, 7zz5:A, 7zz6:D, 7zz6:A, 7zz8:A, 7zz8:C, 7zz8:D, 7zz8:B
20 8rth:A 666 68 0.1143 0.0360 0.3529 1.16e-07 8rth:C, 8rth:E, 8rth:G, 8rth:I, 8rth:K
21 2b8g:A 72 62 0.1048 0.3056 0.3548 4.87e-06 1z6h:A
22 2qf7:A 1076 94 0.1238 0.0242 0.2766 1.67e-05 3tw6:A
23 1bdo:A 80 44 0.0905 0.2375 0.4318 7.80e-05 2bdo:A
24 1bdo:A 80 74 0.1000 0.2625 0.2838 0.025 2bdo:A
25 3tw6:B 1129 55 0.1000 0.0186 0.3818 4.51e-04 4jx4:A, 4jx4:B, 4jx4:C, 4jx4:D, 4jx5:A, 4jx5:B, 4jx5:C, 4jx5:D, 4jx6:A, 4jx6:B, 4jx6:C, 4jx6:D, 4loc:A, 4loc:B, 4loc:C, 4loc:D, 4m6v:A, 4m6v:B, 4m6v:C, 4m6v:D, 4mfd:A, 4mfd:B, 4mfd:C, 4mfd:D, 4mfe:A, 4mfe:B, 4mfe:C, 4mfe:D, 4mim:A, 4mim:B, 4mim:C, 4mim:D, 3tw6:C, 3tw6:D
26 5csl:A 2050 160 0.1667 0.0171 0.2188 6.56e-04
27 3va7:A 1130 93 0.1333 0.0248 0.3011 0.006
28 5csl:B 2072 180 0.1857 0.0188 0.2167 0.29 5ctb:A, 5ctb:C, 5ctc:A, 5ctc:B, 5ctc:C, 5cte:B, 5cte:C, 3h0s:A, 3k8x:A, 3k8x:B, 3k8x:C, 1od2:A, 1od2:B, 3pgq:A, 3pgq:C, 3tv5:A, 3tv5:B, 3tv5:C, 3tvu:A, 3tvu:B, 3tvu:C, 3tvw:A, 3tvw:B, 3tvw:C, 3tz3:A, 3tz3:B, 3tz3:C, 1w96:A, 1w96:B, 1w96:C, 4wyo:B, 4wyo:C, 4wz8:B, 4wz8:C
29 8agd:A 1111 49 0.0762 0.0144 0.3265 0.45 8acq:A, 8acq:C, 8acq:B, 8ae1:A, 8ae1:B, 8ae1:C, 8agd:C, 8agd:B, 7zgy:A, 7zgy:C, 7zgy:B
30 1t5e:C 231 88 0.1048 0.0952 0.2500 0.55 1t5e:E, 1t5e:F, 1t5e:G, 1t5e:H, 1t5e:I, 1t5e:K, 1t5e:L
31 1z05:A 396 121 0.1524 0.0808 0.2645 0.59
32 3rhh:D 480 29 0.0667 0.0292 0.4828 1.2 3rhh:A, 3rhh:B, 3rhh:C
33 4w97:A 196 41 0.0810 0.0867 0.4146 3.2
34 6je8:A 469 42 0.0714 0.0320 0.3571 3.4 6jea:A, 6jeb:A
35 5ti8:B 384 57 0.0905 0.0495 0.3333 4.6

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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