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BioLiP
>protein
PEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRG
GRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLP
PKIVIGYQSHADTATKNRFVV

The query sequence (length=181) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 5ei3:A 191 187 1.0000 0.9476 0.9679 6.16e-135 3am7:A, 4aza:A, 4aza:C, 4bea:A, 5bxv:A, 5bxv:C, 7d6y:A, 4dt6:A, 4dum:A, 5ehc:A, 5eir:A, 1ej1:A, 1ej1:B, 1ej4:A, 1ejh:A, 1ejh:B, 1ejh:C, 1ejh:D, 5ekv:A, 5ekv:C, 7ezw:A, 6gkj:A, 6gkj:B, 6gkj:C, 6gkj:D, 6gkk:A, 6gkk:B, 6gkk:C, 6gkk:D, 6gkl:A, 6gkl:B, 6gkl:C, 6gkl:D, 1ipb:A, 1ipc:A, 5j5o:A, 5j5o:B, 5j5o:C, 5j5o:D, 5j5y:A, 5j5y:B, 1l8b:A, 1l8b:B, 5m7v:A, 5m7v:B, 5m7v:C, 5m7w:A, 5m7w:B, 5m7w:C, 5m7w:D, 5m7x:A, 5m7x:B, 5m7x:C, 5m7x:D, 5m7z:A, 5m7z:B, 5m7z:C, 5m80:A, 5m80:B, 5m81:A, 5m81:B, 5m81:C, 5m81:D, 5m83:A, 5m83:B, 5m84:A, 5m84:B, 7meu:A, 7meu:B, 5osx:A, 5osx:B, 8sx4:A, 8sx4:B, 5t46:A, 5t46:C, 4tpw:A, 4tpw:B, 4tqb:A, 4tqb:B, 4tqc:A, 4tqc:B, 6u06:A, 6u06:B, 6u06:C, 6u06:D, 6u09:A, 6u09:B, 6u09:C, 6u09:D, 3u7x:A, 3u7x:B, 2v8w:A, 2v8w:E, 2v8x:A, 2v8x:E, 2v8y:A, 2v8y:E, 2w97:A, 2w97:B, 1wkw:A, 7xtp:A, 7xtp:B, 6ylr:A, 6ylr:B, 6ylt:A, 6ylt:B, 6ylt:C, 6ylt:D, 6ylv:A, 6ylv:B, 6ylv:C, 6ylv:D, 5zjy:A, 5zjz:A, 5zk5:A, 5zk7:A, 5zk7:B, 5zk9:A, 5zml:A
2 3m93:A 180 177 0.4917 0.4944 0.5028 3.76e-65 3m94:A
3 5abx:A 173 176 0.4862 0.5087 0.5000 4.70e-65
4 5t48:A 181 173 0.5138 0.5138 0.5376 8.82e-65 5abu:A, 4axg:B, 4uec:A, 4uec:C
5 2idv:A 177 184 0.4420 0.4520 0.4348 2.77e-43
6 6fbz:A 191 174 0.4033 0.3822 0.4195 3.28e-43
7 2wmc:A 174 178 0.4033 0.4195 0.4101 4.18e-40 2wmc:B, 2wmc:C, 2wmc:D, 2wmc:E, 2wmc:F, 2wmc:G, 2wmc:H
8 1ap8:A 213 157 0.3425 0.2911 0.3949 2.38e-37 6fc1:A, 6fc1:C, 1rf8:A
9 2jgb:A 187 173 0.3315 0.3209 0.3468 9.42e-37 2jgc:A, 5xln:A
10 3hxg:A 183 174 0.3646 0.3607 0.3793 2.28e-36 3hxi:A
11 5me6:A 175 178 0.3978 0.4114 0.4045 6.83e-36 5me6:D
12 4b6u:A 207 153 0.2486 0.2174 0.2941 3.23e-19
13 6uud:L 213 53 0.0884 0.0751 0.3019 0.33
14 6o7y:A 183 138 0.1768 0.1749 0.2319 0.38 6o7z:A, 6o80:A
15 7q4q:A 218 47 0.0773 0.0642 0.2979 0.51 7q4q:C, 7sgm:L, 7sgm:M, 7sgm:Y, 6w9g:L, 6w9g:M, 6w9g:Y
16 8jyq:E 164 47 0.0773 0.0854 0.2979 0.95 8jyq:B
17 3d0v:A 214 50 0.0829 0.0701 0.3000 1.5 3d0l:A, 3dro:A, 3drq:A, 3drt:A, 3egs:A, 2f5b:L, 3idg:A, 3idi:A, 3idj:A, 3idm:A, 3idn:A, 3moa:L, 3mob:L, 3mod:L, 2p8l:A, 2p8m:A, 2p8p:A, 2pw1:A, 2pw2:A, 1tjg:L, 1tjh:L, 1tji:L, 1u8h:A, 1u8i:A, 1u8j:A, 1u8k:A, 1u8l:A, 1u8m:A, 1u8n:A, 1u8o:A, 1u8p:A, 1u8q:A, 1u91:A, 1u92:A, 1u93:A, 1u95:A
18 8dy9:I 303 59 0.1105 0.0660 0.3390 2.1 8dy7:I
19 5w5x:L 212 50 0.0829 0.0708 0.3000 2.5
20 2a1t:C 388 52 0.0884 0.0412 0.3077 2.6 2a1t:A, 2a1t:B, 2a1t:D, 1egc:A, 1egc:B, 1egc:C, 1egc:D, 1egd:A, 1egd:B, 1egd:C, 1egd:D, 1ege:A, 1ege:B, 1ege:C, 1ege:D, 4p13:A, 4p13:B, 4p13:C, 4p13:D, 8sgp:A, 8sgp:B, 8sgp:C, 8sgp:D, 1t9g:A, 1t9g:B, 1t9g:C, 1t9g:D
21 1qgc:4 218 47 0.0773 0.0642 0.2979 4.2 1acy:L, 1ai1:L, 1ejo:L, 7f35:A, 7f35:C, 7f35:E, 3f58:L, 4gag:L, 4gaj:L, 1ggi:L, 1ggi:M, 1ibg:L, 3s35:L, 7st8:L, 5vxr:L, 5w23:N, 5x2m:L, 2y5t:B
22 4j1q:A 417 79 0.1050 0.0456 0.2405 4.3
23 6bzw:H 218 47 0.0773 0.0642 0.2979 4.4 6bzu:D, 6bzu:B, 6bzu:F, 6bzu:H, 6bzv:B, 6bzv:D, 6bzv:F, 6bzv:H, 6bzw:D, 6bzw:B, 6bzw:F, 7dk7:f, 4g6a:D, 4g6a:L
24 5xcu:B 165 57 0.0773 0.0848 0.2456 5.0 5xcs:B, 5xcu:E
25 2hrp:M 218 47 0.0718 0.0596 0.2766 5.1 4bkl:B, 6bzy:L, 6gxx:L, 2hrp:L, 5mu0:B, 5mu0:D, 5mu0:F, 5mu0:H, 5mu0:J, 5mu0:L, 5mu0:N, 5mu0:P, 5mu2:B, 5mu2:D, 5mu2:F, 5mu2:H, 5mu2:J, 5mu2:L, 5mu2:N, 5mu2:P, 5mub:B, 5mub:D, 5mub:G, 5mub:J, 5mub:M, 5mub:P, 5mub:S, 5mub:V, 5mv3:B, 5mv3:D, 5mv3:G, 5mv3:J, 5mv3:M, 5mv3:P, 5mv3:S, 5mv3:V, 5mv4:B, 5mv4:D, 5mv4:G, 5mv4:J, 5mv4:M, 5mv4:P, 5mv4:S, 5mv4:V, 4nj9:L, 4nja:L, 3o41:L, 3o41:B, 3o45:L, 3o45:B, 2or9:L, 2or9:M
26 3mdd:A 385 52 0.0884 0.0416 0.3077 5.9 3mdd:B, 3mde:A, 3mde:B, 1udy:A, 1udy:B, 1udy:C, 1udy:D
27 2ap2:C 240 57 0.0773 0.0583 0.2456 7.9 2ap2:A, 1mvu:A, 1mvu:B, 6tnp:A, 6tnp:L
28 6yxk:B 218 60 0.0829 0.0688 0.2500 8.3
29 5m63:N 216 45 0.0663 0.0556 0.2667 9.0 5m63:L
30 8dpl:H 221 51 0.0773 0.0633 0.2745 9.8 8dpl:C, 8dpl:O, 8dpm:H, 8dpm:C, 8dpm:M
31 6ldv:L 214 45 0.0773 0.0654 0.3111 10.0 6ldx:L

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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