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BioLiP
>protein
PDARAIAAICEQLRQHVADLGVLYIKLHNYHWHIYGIEFKQVHELLEEYYVSVTEAFDTIAERLLQLGAQAPASMAEYLA
LSGIAEETEKEITIVSALARVKRDFEYLSTRFSQTQVLAAESGDAVTDGIITDILRTLGKAIWMLGATLKA

The query sequence (length=151) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2fjc:B 156 151 1.0000 0.9679 1.0000 8.43e-109 2fjc:A, 2fjc:D, 2fjc:C, 2fjc:E, 2fjc:H, 2fjc:F, 2fjc:G, 2fjc:I, 2fjc:L, 2fjc:J, 2fjc:K, 2fjc:M, 2fjc:N, 2fjc:O, 2fjc:P
2 1jig:A 146 142 0.3576 0.3699 0.3803 5.76e-27 1jig:B, 1jig:C, 1jig:D
3 5lbh:A 143 141 0.3245 0.3427 0.3475 3.17e-26 5lbh:J, 5lbh:B, 5lbh:C, 5lbh:D, 5lbh:G, 5lbh:E, 5lbh:F, 5lbh:L, 5lbh:H, 5lbh:I, 5lbh:K
4 1ji4:A 144 139 0.3311 0.3472 0.3597 3.91e-26 4evb:A, 4evc:A, 1ji4:D, 1ji4:B, 1ji4:C, 1ji4:E, 1ji4:H, 1ji4:F, 1ji4:G, 1ji4:I, 1ji4:L, 1ji4:J, 1ji4:K
5 3kwo:A 149 143 0.3046 0.3087 0.3217 1.88e-24 3kwo:B, 3kwo:C, 3kwo:D
6 1ji5:A 142 142 0.3377 0.3592 0.3592 3.26e-24 1ji5:B, 1ji5:C, 1ji5:D
7 1n1q:A 149 138 0.3245 0.3289 0.3551 3.04e-20 1n1q:B, 1n1q:C, 1n1q:D
8 2bw1:G 165 138 0.3179 0.2909 0.3478 5.09e-18 2bw1:C, 2bw1:D, 2bw1:A, 2bw1:B, 2bw1:H, 2bw1:E, 2bw1:F, 2bw1:K, 2bw1:L, 2bw1:I, 2bw1:J, 1umn:K, 2ux1:A, 2ux1:B, 2ux1:C, 2ux1:D, 2ux1:E, 2ux1:F, 2ux1:G, 2ux1:H, 2ux1:I, 2ux1:J, 2ux1:K, 2ux1:L, 2v15:A, 2v15:B, 2v15:C, 2v15:D, 2v15:E, 2v15:F, 2v15:G, 2v15:H, 2v15:I, 2v15:J, 2v15:K, 2v15:L, 2xjm:A, 2xjm:B, 2xjm:C, 2xjm:D, 2xjm:E, 2xjm:F, 2xjm:G, 2xjm:H, 2xjm:I, 2xjm:J, 2xjm:K, 2xjm:L, 2xjn:A, 2xjn:C, 2xjn:D, 2xjn:E, 2xjn:F, 2xjn:G, 2xjn:H, 2xjn:I, 2xjn:J, 2xjn:K, 2xjn:L, 2xkq:A, 2xkq:B, 2xkq:C, 2xkq:D, 2xkq:E, 2xkq:F, 2xkq:G, 2xkq:H, 2xkq:I, 2xkq:J, 2xkq:K, 2xkq:L
9 6hx2:B 156 140 0.2781 0.2692 0.3000 6.12e-17 6hui:D, 6hui:A, 6hui:B, 6hui:C, 6hui:E, 6hui:F, 6hx2:A, 6hx2:C, 6hx2:D, 6hx2:E, 6hx2:F, 2iy4:B, 2iy4:C, 2iy4:D, 2iy4:E, 2iy4:G, 2iy4:F, 2iy4:H, 2iy4:I, 2iy4:J, 2iy4:K, 2iy4:L, 2iy4:M, 2iy4:O, 2iy4:N, 2iy4:P, 2iy4:Q, 2iy4:S, 2iy4:R, 2iy4:T, 2iy4:U, 2iy4:X, 2iy4:V, 2iy4:Y, 1qgh:E, 1qgh:G, 1qgh:A, 1qgh:C, 1qgh:I, 1qgh:K, 1qgh:F, 1qgh:H, 1qgh:J, 1qgh:L, 1qgh:B, 1qgh:D, 6sev:A, 6sev:B, 6sev:D, 6sev:E
10 8ffd:B 156 78 0.2252 0.2179 0.4359 4.58e-15 8ffb:A, 8ffb:B, 8ffb:L, 8ffb:C, 8ffb:D, 8ffb:E, 8ffb:F, 8ffb:G, 8ffb:I, 8ffb:H, 8ffb:J, 8ffb:K, 8ffc:A, 8ffc:E, 8ffc:B, 8ffc:L, 8ffc:C, 8ffc:J, 8ffc:D, 8ffc:F, 8ffc:G, 8ffc:I, 8ffc:H, 8ffc:K, 8ffc:M, 8ffc:N, 8ffc:O, 8ffc:P, 8ffd:A, 8ffd:C, 8ffd:D, 8ffd:E, 8ffd:F, 8ffd:G, 8ffd:H, 8ffd:I, 8ffd:J, 8ffd:K, 8ffd:L, 8ffd:M, 8ffd:N, 8ffd:O, 8ffd:P
11 2wlu:A 166 136 0.2848 0.2590 0.3162 6.35e-14
12 2c2f:A 178 144 0.2649 0.2247 0.2778 2.76e-12 2c2u:A, 2f7n:A
13 4cyb:J 173 144 0.2715 0.2370 0.2847 2.48e-10 4cyb:A, 4cyb:B, 4cyb:C, 4cyb:D, 4cyb:E, 4cyb:F, 4cyb:G, 4cyb:H, 4cyb:I, 4cyb:K, 4cyb:L
14 2pyb:A 151 147 0.2583 0.2583 0.2653 2.81e-09 2pyb:B, 2pyb:C, 2pyb:D
15 6lkp:C 172 122 0.2384 0.2093 0.2951 1.06e-06 6lkp:A, 6lkp:B, 6lkp:D, 6lkp:E, 6lkp:F
16 2c2j:A 165 138 0.2119 0.1939 0.2319 1.13e-06 2c6r:A, 6tb5:A, 6tgt:A
17 4dyu:H 157 64 0.1523 0.1465 0.3594 1.96e-06 4dyu:A, 4dyu:B, 4dyu:C, 4dyu:D, 4dyu:E, 4dyu:F, 4dyu:I, 4dyu:J, 4dyu:K, 4dyu:L
18 2vxx:B 173 92 0.1589 0.1387 0.2609 2.96e-06 2vxx:A, 2vxx:D, 2vxx:C
19 7aqs:E 159 154 0.2517 0.2390 0.2468 8.93e-06 3ak9:A, 3ak9:C, 3ak9:B, 3ak9:D, 3ak9:E, 3ak9:G, 3ak9:F, 3ak9:H, 3ak9:I, 3ak9:K, 3ak9:J, 3ak9:L, 7aqs:A, 7aqs:C, 7aqs:B, 7aqs:D, 7aqs:G, 7aqs:F, 7aqs:H, 7aqs:I, 7aqs:K, 7aqs:J, 7aqs:L, 7aqs:M, 7aqs:O, 7aqs:N, 7aqs:P, 7aqs:Q, 7aqs:S, 7aqs:R, 7aqs:T, 7aqs:U, 7aqs:W, 7aqs:V, 7aqs:X, 1f30:A, 1f30:B, 1f30:E, 1f30:F, 1f30:G, 1f30:H, 1f30:I, 1f30:J
20 5hjh:D 178 88 0.1656 0.1404 0.2841 1.24e-05 5hjh:A, 5hjh:B, 5hjh:C, 5i4j:A, 5i4j:B, 5i4j:C, 5i4j:D
21 3ge4:A 161 41 0.1126 0.1056 0.4146 2.09e-05 3ge4:B, 3ge4:C, 3ge4:D, 3ge4:E, 3ge4:F, 3ge4:G, 3ge4:H, 3ge4:I, 3ge4:J, 3ge4:K, 3ge4:L
22 1moj:A 180 99 0.2053 0.1722 0.3131 2.32e-04 1moj:B, 1moj:C, 1moj:D, 1tjo:A, 1tjo:B, 1tjo:C, 1tjo:D, 1tk6:A, 1tk6:B, 1tk6:C, 1tk6:D, 1tko:A, 1tko:B, 1tko:C, 1tko:D, 1tkp:A, 1tkp:B, 1tkp:D, 1tkp:C
23 4m33:A 161 69 0.1457 0.1366 0.3188 2.82e-04 4m32:A, 4m32:B, 4m32:C, 4m32:D, 4m33:B, 4m33:C, 4m33:D, 4m34:A, 4m34:B, 4m34:C, 4m34:D, 4m35:A, 4m35:B, 4m35:C, 4m35:D, 5ww3:A, 5ww3:B, 5ww3:C, 5ww3:D, 5ww4:A, 5ww4:B, 5ww4:C, 5ww4:D, 5ww5:A, 5ww5:C, 5ww5:B, 5ww6:A, 5ww6:B, 5ww6:C, 5ww6:D, 5ww7:A, 5ww7:C, 5ww7:B, 5ww7:D, 5ww8:A, 5ww8:B, 5ww8:C, 5ww8:D, 5ww9:A, 5ww9:B, 5ww9:C, 5ww9:D, 2z90:A, 2z90:B, 2z90:C, 2z90:D
24 2yjj:G 157 46 0.1060 0.1019 0.3478 0.001 2yjj:A, 2yjj:B, 2yjj:C, 2yjj:I, 2yjj:D, 2yjj:J, 2yjj:E, 2yjj:F, 2yjj:H, 2yjj:K, 2yjj:L, 2yjk:A, 2yjk:B, 2yjk:C, 2yjk:I, 2yjk:D, 2yjk:J, 2yjk:E, 2yjk:F, 2yjk:G, 2yjk:H, 2yjk:K, 2yjk:L
25 1vei:A 175 65 0.1126 0.0971 0.2615 0.002 1uvh:A, 1uvh:B, 1uvh:C, 1uvh:D, 1veq:A, 1veq:J, 1veq:B, 1veq:C, 1veq:D, 1veq:E, 1veq:F, 1veq:L, 1veq:G, 1veq:H, 1veq:I, 1veq:K
26 4a25:B 169 80 0.1391 0.1243 0.2625 0.004 4a25:A, 4a25:C, 4a25:D
27 8z9x:B 567 41 0.0993 0.0265 0.3659 1.5 8z9x:A
28 7stw:A 170 50 0.0795 0.0706 0.2400 2.1 7stw:B, 7stw:C, 7stw:D, 7stw:E, 7stw:F, 7stw:G, 7stw:H, 7stw:I, 7stw:J, 7stw:K, 7stw:L
29 2ex8:A 456 63 0.1258 0.0417 0.3016 3.5 2ex6:A, 2ex9:A, 2exa:A, 2exb:A
30 7n3m:AAA 437 76 0.1589 0.0549 0.3158 5.1 4enh:A, 4fia:A, 4j14:A, 7lrl:A, 7ls3:A, 7ls4:A, 3mdm:A, 3mdr:A, 3mdr:B, 3mdt:A, 3mdt:B, 3mdv:A, 3mdv:B, 7n3l:A, 7n6f:A, 2q9f:A, 2q9g:A
31 2dqn:A 485 40 0.0993 0.0309 0.3750 6.0 2f2a:A
32 4ccw:A 285 19 0.0728 0.0386 0.5789 6.4
33 3ays:A 357 75 0.1126 0.0476 0.2267 7.4
34 5uxa:A 301 30 0.0728 0.0365 0.3667 8.1 5igv:A, 5igw:A, 5igy:A, 5igz:A, 5ih0:A, 5ih1:A, 5iwu:A
35 1pz1:A 333 44 0.0795 0.0360 0.2727 8.5 1pz1:B
36 3nbx:X 481 47 0.0927 0.0291 0.2979 8.6 6q7l:V, 6q7l:W, 6q7l:X, 6q7l:Y, 6q7l:Z, 6q7m:V, 6q7m:W, 6q7m:X, 6q7m:Y, 6q7m:Z, 6sza:B, 6sza:C, 6sza:A, 6sza:D, 6sza:E, 6sza:F, 6szb:D, 6szb:E, 6szb:C, 6szb:B, 6szb:A, 6szb:F
37 5gvi:A 326 50 0.1060 0.0491 0.3200 8.9

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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