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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
PAILNPIARPEVPQELAENIILTSLNDVYDWARLSSLWPLMYGTACCFIEFAAMIGSRFDFDRFGLVPRNSPRQADLIIT
SGTITMKMAPALVRLYEQMPSPKYVIAMGACTITGGMFSSDSYSAVRGVDKLIPVDVYLPGCPPRPEAIMDAIVKLRKKI
ANEHINERGNLAQTHRLFTAKHKMKPVPPILTGQYLNAPSRQAPPP

The query sequence (length=206) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6nbq:K 212 206 1.0000 0.9717 1.0000 5.56e-155 6hum:K, 6khi:K, 6khj:K, 6l7o:K, 6l7p:K, 6nbx:K, 6nby:K, 6tjv:K
2 7wfg:K 167 178 0.5534 0.6826 0.6404 7.27e-80 7wg5:K
3 8q0j:B 158 143 0.3641 0.4747 0.5245 2.88e-55 7ak5:B, 7ak6:B, 7b93:B, 8c2s:B, 8ca3:B, 8ca5:B, 7dgq:D, 7dgr:D, 7dgs:D, 7dgz:D, 7dh0:D, 7dkf:D2, 6g2j:B, 6g72:B, 5gpn:a, 5gup:I, 8iao:B, 8iap:B, 8ib4:B, 8ib5:B, 8ib9:B, 8iba:B, 8ibd:B, 8ibe:B, 8ic2:B, 8ic3:B, 5lc5:B, 5ldw:B, 5ldx:B, 5lnk:6, 5o31:B, 8olt:B, 8om1:B, 7psa:B, 8pw5:6, 8pw6:6, 8pw7:6, 8q0a:B, 8q0f:B, 8q0m:B, 8q0o:B, 8q0q:B, 8q1p:B, 8q1u:B, 8q1y:B, 8q25:B, 8q45:B, 8q46:B, 8q47:B, 8q48:B, 8q49:B, 8q4a:B, 6q9d:S7, 6qa9:S7, 6qbx:S7, 6qc2:S7, 6qc3:S7, 6qc4:S7, 6qc5:S7, 6qc6:S7, 6qc7:S7, 6qc8:S7, 6qc9:S7, 6qca:S7, 6qcf:S7, 7qsd:B, 7qsk:B, 7qsl:B, 7qsm:B, 7qsn:B, 7qso:B, 7r41:B, 7r42:B, 7r43:B, 7r44:B, 7r45:B, 7r46:B, 7r47:B, 7r48:B, 7r4c:B, 7r4d:B, 7r4f:B, 7r4g:B, 8rgp:6, 8rgq:6, 8rgr:6, 8rgt:6, 8ud1:1B, 8ueo:1B, 8uep:1B, 8ueq:1B, 8uer:1B, 8ues:1B, 8uet:1B, 8ueu:1B, 8uev:1B, 8uew:1B, 8uex:1B, 8uey:1B, 8uez:1B, 8ugh:1B, 8ugi:1B, 8ugj:1B, 8ugn:1B, 8ugn:5B, 8ugp:1B, 8ugr:1B, 8ugr:5B, 7v2c:C, 7v2d:C, 7v2e:C, 7v2f:C, 7v2h:C, 7v2k:C, 7v2r:C, 7v30:C, 7v31:C, 7v32:C, 7v33:C, 7v3m:C, 7vb7:C, 7vbn:C, 7vbz:C, 7vwj:C, 7vxp:C, 7vxu:C, 7vy8:C, 7vya:C, 7vyf:C, 7vyh:C, 7vyn:C, 7vz1:C, 7vzv:C, 7vzw:C, 7w00:C, 7w0h:C, 7w0r:C, 7w0y:C, 7w1o:C, 7w1p:C, 7w1t:C, 7w1u:C, 7w1v:C, 7w1z:C, 7w20:C, 7w2k:C, 7w2l:C, 7w2r:C, 7w2u:C, 7w2y:C, 7w31:C, 7w32:C, 7w35:C, 7w4c:C, 7w4d:C, 7w4e:C, 7w4f:C, 7w4g:C, 7w4j:C, 7w4k:C, 7w4l:C, 7w4m:C, 7w4n:C, 7w4q:C, 5xtb:C, 5xtd:C, 5xth:C, 5xti:C, 5xti:BC, 7zd6:6, 7zdh:6, 7zdj:6, 7zdm:6, 7zdp:6, 7zeb:6, 6zk9:6, 6zkc:6, 6zkd:6, 6zke:6, 6zkf:6, 6zkg:6, 6zkh:6, 6zki:6, 6zkj:6, 6zkk:6, 6zkl:6, 6zkm:6, 6zkn:6, 6zko:6, 6zkp:6, 6zkq:6, 6zkr:6, 6zks:6, 6zkt:6, 6zku:6, 6zkv:6, 6zr2:B, 6ztq:B
4 6i0d:6 166 154 0.3835 0.4759 0.5130 1.34e-54 4hea:6, 4hea:G, 6i0d:G, 6i1p:6, 6i1p:G, 3i9v:6, 3i9v:F, 3ias:6, 3ias:F, 3ias:O, 3ias:X, 3m9s:6, 3m9s:F, 6q8o:6, 6q8o:G, 6q8w:6, 6q8w:G, 6q8x:6, 6q8x:G, 6y11:6, 6y11:G, 6ziy:6, 6zjl:6, 6zjn:6, 6zjy:6
5 8b9z:B 182 139 0.3544 0.4011 0.5252 4.87e-53 8ba0:B, 8esw:S7, 8esz:S7
6 7tgh:S7 162 149 0.3738 0.4753 0.5168 8.85e-53 8b6f:AT, 8bqs:AT, 8gym:s7, 8gym:S7, 8gzu:s7, 8gzu:S7
7 7zm7:K 182 165 0.3786 0.4286 0.4727 3.65e-52 6h8k:K, 7zmb:K, 7zmg:K
8 8e73:S7 158 144 0.3350 0.4367 0.4792 7.96e-52 7a23:E, 7a24:E, 7aqr:B, 7ar7:B, 7ar8:B, 7arb:B, 8bee:B, 8bpx:B, 8bq5:B, 8bq6:B, 6x89:S7
9 7z7s:B 213 147 0.3689 0.3568 0.5170 2.68e-51 7nyr:B, 7nyu:B, 7nyv:B, 7p61:B, 7p62:B, 7p63:B, 7p64:B, 7p7c:B, 7p7j:B, 7p7k:B, 7p7l:B, 7p7m:B, 7z7r:B, 7z7t:B, 7z7v:B, 7z80:B, 7z83:B, 7z84:B
10 8iuf:S7 201 148 0.3495 0.3582 0.4865 3.33e-51 8j9h:S7, 8j9i:S7, 8j9j:S7
11 7o6y:K 177 151 0.3495 0.4068 0.4768 4.75e-51 6gcs:K, 7o71:K, 6rfq:K, 6rfr:K, 6rfs:K, 4wz7:K, 6y79:K, 6yj4:B
12 8qby:B 148 141 0.3398 0.4730 0.4965 1.56e-49
13 8e9g:B 183 148 0.3544 0.3989 0.4932 4.72e-49 8e9h:B, 8e9i:B
14 7arc:B 154 142 0.3398 0.4545 0.4930 8.52e-49 7ard:B
15 7q5y:F 135 137 0.3252 0.4963 0.4891 4.07e-47 7q5y:L, 7q5y:R, 7q5y:X
16 2fug:6 144 153 0.3350 0.4792 0.4510 5.76e-46 2fug:F, 2fug:O, 2fug:X, 3iam:6, 3iam:F, 2ybb:6
17 7p69:B 169 144 0.3398 0.4142 0.4861 7.49e-46 7nz1:B, 7p7e:B, 7zc5:B, 7zci:B
18 7awt:B 141 145 0.3495 0.5106 0.4966 2.50e-44
19 6u8y:J 177 151 0.3058 0.3559 0.4172 7.25e-41 6u8y:j
20 6cfw:J 143 116 0.2379 0.3427 0.4224 3.64e-27
21 7z0s:G 250 108 0.2233 0.1840 0.4259 1.35e-23 7z0t:G
22 4omf:G 231 91 0.1456 0.1299 0.3297 7.70e-08 4ci0:B, 3zfs:B
23 6qgr:G 253 89 0.1311 0.1067 0.3034 5.10e-07 6qgt:G, 6qii:G
24 5xf9:C 178 155 0.1699 0.1966 0.2258 1.20e-05 5xf9:G, 5xfa:C, 5xfa:G
25 5jsh:A 283 150 0.1845 0.1343 0.2533 0.001 5jsk:A, 5jsu:A, 5jsy:A, 5jt1:A, 6rtp:A, 6ru9:A, 6ruc:A, 2wpn:A, 6z7r:A, 6z7r:C, 6z8j:A, 6z8j:C, 6z8m:A, 6z8o:A, 6z8o:C, 6z9g:A, 6z9g:C, 6z9g:E, 6z9g:G, 6z9o:A, 6za1:A, 3ze6:A, 3ze7:A, 3ze8:A, 3ze9:A, 3zea:A
26 4kl8:S 279 128 0.1505 0.1111 0.2422 0.028 1cc1:S, 4kl8:T, 4kn9:S, 4kn9:T, 4ko1:S, 4ko1:T, 4ko2:S, 4ko2:T, 4ko3:S, 4ko3:T, 4ko4:S, 4ko4:T
27 5odc:E 298 121 0.1359 0.0940 0.2314 0.034 5odc:K, 5odh:E, 5odh:K, 5odi:E, 5odi:K, 5odq:E, 5odq:K, 5odr:E, 5odr:K
28 4urh:C 264 57 0.0874 0.0682 0.3158 0.075 3cur:A, 3cur:B, 3cur:C, 3cus:A, 3cus:B, 3cus:C, 1frf:S, 3h3x:A, 3h3x:B, 3h3x:C, 4ucq:A, 4ucq:B, 4ucq:C, 4ucw:A, 4ucw:B, 4ucw:C, 4ucx:A, 4ucx:B, 4ucx:C, 4ud2:A, 4ud2:B, 4ud2:C, 4ud6:A, 4ud6:B, 4ud6:C, 4ue2:A, 4ue2:B, 4ue2:C, 4ue6:A, 4ue6:B, 4ue6:C, 4ueq:A, 4ueq:B, 4ueq:C, 4ueq:D, 4ueq:E, 4ueq:F, 4uew:A, 4uew:B, 4uew:C, 4upe:A, 4upe:B, 4upe:C, 4upv:A, 4upv:B, 4uql:A, 4uql:B, 4uqp:A, 4uqp:B, 4urh:A, 4urh:B, 1yqw:A, 1yqw:B, 1yqw:C, 1yrq:A, 1yrq:B, 1yrq:C, 1yrq:D, 1yrq:F, 1yrq:G
29 1frv:A 262 68 0.0971 0.0763 0.2941 0.14 1frv:C, 2frv:S, 2frv:A, 2frv:C, 2frv:E, 2frv:G, 2frv:I, 1yq9:A, 1yq9:B
30 1e3d:A 262 65 0.0874 0.0687 0.2769 0.26 1e3d:C
31 1h2a:S 267 71 0.1117 0.0861 0.3239 0.65 1h2r:S, 4u9h:S, 4u9i:S, 1ubh:S, 1ubj:S, 1ubk:S, 1ubl:S, 1ubm:S, 1ubo:S, 1ubr:S, 1ubt:S, 1ubu:S, 8w6x:S, 1wuh:S, 1wui:S, 1wuj:S, 1wuk:S, 1wul:S, 5xle:S, 5xlf:S, 5xlg:S, 5xlh:S, 5y4n:S
32 7t2r:E 179 21 0.0534 0.0615 0.5238 1.1 7t2r:J, 7t30:E, 7t30:J
33 6yft:AC 113 48 0.0728 0.1327 0.3125 2.1 6yft:DO, 6yft:AF, 6yft:DR, 6yft:AI, 6yft:DU, 6yft:AL, 6yft:DX, 6yft:AO, 6yft:EA, 6yft:AR, 6yft:ED, 6yft:AU, 6yft:EG, 6yft:AX, 6yft:EJ, 6yft:BA, 6yft:EM, 6yft:BD, 6yft:EP, 6yft:BG, 6yft:ES, 6yft:BJ, 6yft:EV, 6yft:BM, 6yft:EY, 6yft:BP, 6yft:FB, 6yft:BS, 6yft:FE, 6yft:BV, 6yft:FH, 6yft:BY, 6yft:FK, 6yft:CB, 6yft:FN, 6yft:CE, 6yft:FQ, 6yft:CH, 6yft:FT, 6yft:CK, 6yft:FW, 6yft:CN, 6yft:FZ, 6yft:CQ, 6yft:GC, 6yft:CT, 6yft:GF, 6yft:CW, 6yft:GI, 6yft:CZ, 6yft:GL, 6yft:DC, 6yft:GO, 6yft:DF, 6yft:GR, 6yft:DI, 6yft:GU, 6yft:DL, 6yft:GX, 6yft:HA, 6yft:KM, 6yft:HD, 6yft:KP, 6yft:HG, 6yft:KS, 6yft:HJ, 6yft:KV, 6yft:HM, 6yft:KY, 6yft:HP, 6yft:LB, 6yft:HS, 6yft:LE, 6yft:HV, 6yft:LH, 6yft:HY, 6yft:LK, 6yft:IB, 6yft:LN, 6yft:IE, 6yft:LQ, 6yft:IH, 6yft:LT, 6yft:IK, 6yft:LW, 6yft:IN, 6yft:LZ, 6yft:IQ, 6yft:MC, 6yft:IT, 6yft:MF, 6yft:IW, 6yft:MI, 6yft:IZ, 6yft:ML, 6yft:JC, 6yft:MO, 6yft:JF, 6yft:MR, 6yft:JI, 6yft:MU, 6yft:JL, 6yft:MX, 6yft:JO, 6yft:NA, 6yft:JR, 6yft:ND, 6yft:JU, 6yft:NG, 6yft:JX, 6yft:NJ, 6yft:KA, 6yft:NM, 6yft:KD, 6yft:NP, 6yft:KG, 6yft:NS, 6yft:KJ, 6yft:NV
34 5ydj:B 538 169 0.2136 0.0818 0.2604 3.0 6ary:A, 6ary:B
35 8rjb:4 62 38 0.0728 0.2419 0.3947 5.0 8rjc:4, 8rjd:4
36 4c3o:B 263 92 0.1311 0.1027 0.2935 6.9 4c3o:D, 4c3o:F
37 6c12:B 537 81 0.1019 0.0391 0.2593 8.2 6c12:A
38 6jxn:B 212 95 0.1117 0.1085 0.2421 8.7 6jxn:A, 6jxn:C, 6jxn:D, 6jxs:A, 6jxs:B, 6jxs:C, 6jxs:D

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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