BioLiP

>protein
NWYNDTYPLSPPQRTPAGIRYRIAVIADLDTESRAQEENTWFSYLKKGYLTLSDSGDKVAVEWDKDHGVLESHLAEKGRG
MELSDLIVFNGKLYSVDDRTGVVYQIEGSKAVPWVILSDGDGTVEKGFKAEWLAVKDERLYVGGLGKEWTTTTGDVVNEN
PEWVKVVGYKGSVDHENWVSNYNALRAAAGIQPPGYLIHESACWSDTLQRWFFLPRRASQERYSEKDDERKGANLLLSAS
PDFGDIAVSHVGAVVPTHGFSSFKFIPNTDDQIIVALKSEEDSGRVASYIMAFTLDGRFLLPETKIGSVKYEGIEFI

The query sequence (length=317) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	2h2n:A	317	317	1.0000	1.0000	1.0000	0.0	2h2n:B, 2h2u:A, 2h2u:B, 1s18:A, 1s18:B, 1s1d:A, 1s1d:B
2	2pk0:A	247	75	0.0726	0.0931	0.3067	0.57	2pk0:B, 2pk0:C, 2pk0:D
3	7pub:Fi	469	60	0.0505	0.0341	0.2667	1.0
4	5k0s:C	497	147	0.1262	0.0805	0.2721	2.3	5k0s:A, 5k0s:B, 5k0t:A, 5k0t:C, 4py2:A, 4py2:B, 4py2:C
5	7pua:Fi	475	67	0.0536	0.0358	0.2537	3.9
6	1xag:A	353	45	0.0442	0.0397	0.3111	5.6	1xah:A, 1xah:B, 1xai:A, 1xai:B, 1xaj:A, 1xaj:B, 1xal:A, 1xal:B
7	8e56:F	973	54	0.0536	0.0175	0.3148	6.5	8e57:F, 8e58:F, 8eog:D, 8fd7:D, 5gjw:F, 6jp5:F, 6jpa:F, 6jpb:F, 7vfs:B, 7vfu:B, 7vfv:B, 7vfw:B, 7xlq:D, 7yg5:D
8	8if3:A	917	54	0.0536	0.0185	0.3148	7.8
9	8x90:B	964	54	0.0536	0.0176	0.3148	7.8	8e59:D, 8e5a:D, 8e5b:D, 8epl:C, 8epm:C, 8fhs:D, 7mix:D, 7miy:D, 7uhf:D, 7uhg:D, 8we6:D, 8we7:D, 8we8:D, 8we9:D, 8wea:D, 8x91:B, 8x93:B
10	4gyl:A	340	41	0.0473	0.0441	0.3659	8.4	4gyn:A, 4kzf:A
11	5zb3:A	280	38	0.0442	0.0500	0.3684	8.6	5zb1:A, 5zb3:B

[Back]