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BioLiP
>protein
NVSVAAYLAVLLGTFIPVVFLLTLYIQSESRKAAET

The query sequence (length=36) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8wb4:M 36 36 1.0000 1.0000 1.0000 2.28e-19 8wb4:m
2 8xlp:m 38 36 0.8889 0.8421 0.8889 2.03e-17
3 7y5e:ML 42 36 0.6944 0.5952 0.6944 3.26e-12 7y5e:m6, 7y7a:M9, 7y7a:ME, 7y7a:mO, 7y7a:mZ, 7y7a:Mm
4 8j5k:M 41 35 0.5833 0.5122 0.6000 2.17e-10 8j5k:m
5 4yuu:m2 40 33 0.5556 0.5000 0.6061 5.24e-08 4yuu:m1, 4yuu:M2
6 8wql:MD 36 35 0.4167 0.4167 0.4286 3.35e-04 8wql:ME, 8wql:M1, 8wql:m1, 8wql:mD, 8wql:mE
7 3a0b:M 36 29 0.3056 0.3056 0.3793 0.020 3a0b:m, 3a0h:M, 3a0h:m, 5b66:M, 7d1u:M, 7d1u:m, 7dxh:m, 8f4f:m, 6jln:M, 6jlo:M, 6jlp:M, 5mx2:m, 1s5l:M, 1s5l:m, 5tis:M, 5v2c:M
8 7ymi:M 31 24 0.3611 0.4194 0.5417 0.049 7ymi:m, 7ymm:1M, 7ymm:2M, 7ymm:3M, 7ymm:4M
9 5xnl:M 33 30 0.2778 0.3030 0.3333 1.1 7oui:M, 7oui:m, 5xnl:m, 5xnm:M, 5xnm:m
10 8tow:M 31 23 0.2778 0.3226 0.4348 1.2 8tow:m
11 8bd3:m 57 30 0.3056 0.1930 0.3667 7.6
12 5v9x:A 772 31 0.3333 0.0155 0.3871 8.7

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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