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BioLiP
>protein
NTLQVRLLSENARMPERNHKTDAGYDIFSAETVVLEPQEKAVIKTDVAVSIPEGYVGLLTSRSGVSSKTHLVIETGKIDA
GYHGNLGINIKNDAIASNGYITPGVFDIKGEIDLSDAIRQYGTYQINEGDKLAQLVIVPIWTPELKQVEEFE

The query sequence (length=152) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 4wrk:A 158 152 0.9934 0.9557 0.9934 5.48e-110 4gv8:A, 4gv8:C, 4gv8:B, 4gv8:D, 4gv8:F, 4gv8:E, 4wrk:B, 4wrk:C, 4wrk:D, 4wrk:E, 4wrk:F
2 5cct:A 169 154 0.7763 0.6982 0.7662 1.81e-78 5cco:A, 5nyz:A, 5nz2:A, 3zez:A, 3zf0:A, 3zf1:A, 3zf4:A, 3zf5:A, 3zf6:A
3 6mjk:A 144 150 0.3092 0.3264 0.3133 1.10e-20
4 6ljj:A 150 147 0.2895 0.2933 0.2993 1.38e-20 3ara:A, 3ara:C, 3ara:B, 3arn:A, 3arn:C, 3arn:B, 3ehw:A, 3ehw:B, 3ehw:C, 3ehw:X, 3ehw:Y, 3ehw:Z, 5h4j:A, 2hqu:A, 2hqu:B, 2hqu:C
5 5f9k:B 130 152 0.3026 0.3538 0.3026 1.07e-18 5f9k:A, 5f9k:C
6 2ol1:C 125 149 0.3092 0.3760 0.3154 1.36e-18 2oke:A, 2oke:C, 2oke:B, 2ol1:A, 2ol1:B
7 4gcy:A 163 154 0.3224 0.3006 0.3182 6.14e-18 8cga:A, 5ect:A, 5edd:A, 3h6d:A, 3hza:A, 3i93:A, 3loj:A, 2py4:A, 1six:A, 1sjn:A, 1sjn:C, 1sjn:B, 1sm8:A, 1sm8:B, 1sm8:C, 1smc:A, 1smc:B, 1smc:C, 1snf:A, 1snf:C, 1snf:B
8 4oop:B 142 150 0.3026 0.3239 0.3067 2.08e-17 4oop:A, 4oop:C
9 3f4f:A 138 90 0.1645 0.1812 0.2778 7.31e-11 3f4f:B, 3f4f:C, 3p48:A, 3p48:C, 3p48:B
10 1f7r:A 133 71 0.1974 0.2256 0.4225 1.35e-10 1f7k:A, 1f7k:B, 1f7n:A, 1f7n:B, 1f7p:A, 1f7p:C, 1f7p:B, 1f7q:A, 1f7q:C, 1f7q:B
11 5y5p:D 171 84 0.1908 0.1696 0.3452 2.45e-09 5y5p:A, 5y5p:B, 5y5p:C, 5y5p:E, 5y5p:F, 5y5q:A, 5y5q:B, 5y5q:C
12 6hde:B 152 144 0.2303 0.2303 0.2431 2.29e-07 1eu5:A, 1euw:A, 6hde:A, 6hde:C, 2hrm:A, 1rn8:A, 1rnj:A, 1seh:A, 1syl:A
13 8hrv:B 145 152 0.1974 0.2069 0.1974 9.20e-07 8hrv:A, 8hrv:C
14 6mao:A 137 145 0.2434 0.2701 0.2552 3.67e-06
15 2y8c:C 136 86 0.1776 0.1985 0.3140 3.27e-04 2y8c:B
16 3t64:A 153 100 0.2039 0.2026 0.3100 4.46e-04 3t60:A, 3t60:B, 3t60:C, 3t64:B, 3t64:C, 3t6y:A, 3t6y:B, 3t6y:C, 3t70:A, 3t70:B, 3t70:C, 1vyq:A, 1vyq:B, 1vyq:C, 2y8c:A
17 7n6s:C 147 83 0.1447 0.1497 0.2651 5.66e-04 7n6s:A, 7n6s:B, 7n6s:F, 7n6s:D, 7n6s:E
18 4aoo:A 143 63 0.1447 0.1538 0.3492 0.030 4ao5:A, 4ao5:B, 4ao5:C, 4ao5:D, 4ao5:E, 4ao5:F, 4aoo:B, 4aoo:C, 4aoo:D, 4aoz:A, 4aoz:B, 4aoz:C, 4apz:1, 4apz:Y, 4apz:2, 4apz:3, 4apz:4, 4apz:5, 4apz:7, 4apz:6, 4apz:8, 4apz:9, 4apz:a, 4apz:A, 4apz:C, 4apz:B, 4apz:D, 4apz:E, 4apz:F, 4apz:G, 4apz:I, 4apz:H, 4apz:J, 4apz:K, 4apz:L, 4apz:M, 4apz:N, 4apz:O, 4apz:P, 4apz:R, 4apz:Q, 4apz:S, 4apz:U, 4apz:T, 4apz:V, 4apz:W, 4apz:X, 4apz:Z, 4apz:b, 4apz:d, 4apz:c, 4apz:e, 4apz:g, 4apz:f, 4apz:h, 4apz:j, 4apz:i, 4apz:k, 4apz:m, 4apz:l, 4b0h:A, 4b0h:B, 4b0h:C, 2xce:A, 2xce:B, 2xce:C, 2xce:D, 2xce:E, 2xce:F, 2xy3:A, 2xy3:B, 2xy3:C, 2xy3:D, 2xy3:E, 2xy3:F
19 6lj3:A 164 80 0.1579 0.1463 0.3000 0.11 6ky9:A, 6ky9:B, 6ky9:C, 6kz6:C, 6kz6:B, 6kz6:A, 6lis:A, 6lis:B, 6lis:C, 6lis:D, 6lis:F, 6lis:E, 6lj3:C, 6lj3:B
20 1jda:A 418 85 0.1711 0.0622 0.3059 0.39 2amg:A, 1gcy:A, 6iwk:A, 6iyg:A, 6j3x:A, 1jdc:A, 1jdd:A, 6jqb:A, 1qi3:A, 1qi4:A, 1qi5:A, 1qpk:A
21 1pzw:A 80 56 0.0921 0.1750 0.2500 0.82
22 6n7j:L 214 40 0.0724 0.0514 0.2750 1.4
23 6ven:O 315 114 0.1908 0.0921 0.2544 2.5
24 6v59:A 419 26 0.0789 0.0286 0.4615 4.8 6nx0:A, 6v59:B
25 6iat:D 393 53 0.1053 0.0407 0.3019 7.0 6iat:A, 6iaw:B, 6iaw:C, 6ib1:D, 6ib1:A, 6q3g:A1, 6q3g:D1, 6q3g:J1, 6q3g:L1, 6q3g:R1, 6q3g:T1, 6q3g:Y1, 6q3g:a1, 6q3g:g1, 6q3g:i1, 6q3g:A3, 6q3g:D3, 6q3g:J3, 6q3g:L3, 6q3g:R3, 6q3g:T3, 6q3g:Y3, 6q3g:BK, 6q3g:b3, 6q3g:BD, 6q3g:A4, 6q3g:D4, 6q3g:J4, 6q3g:L4, 6q3g:R4, 6q3g:T4, 6q3g:Y4, 6q3g:a4, 6q3g:g4, 6q3g:i4, 6q3g:A6, 6q3g:D6, 6q3g:J6, 6q3g:L6, 6q3g:R6, 6q3g:T6, 6q3g:Z6, 6q3g:b6, 6q3g:h6, 6q3g:j6, 6q3g:A7, 6q3g:D7, 6q3g:J7, 6q3g:L7, 6q3g:R7, 6q3g:T7, 6q3g:Z7, 6q3g:b7, 6q3g:h7, 6q3g:j7, 6q3g:A8, 6q3g:D8, 6q3g:J8, 6q3g:L8, 6q3g:R8, 6q3g:T8, 6q3g:Z8, 6q3g:b8, 6q3g:h8, 6q3g:j8, 6q3g:CD, 6q3g:DD, 6q3g:DE, 6q3g:BP, 6q3g:BE, 6q3g:FE, 6q3g:LE, 6q3g:NE, 6q3g:TE, 6q3g:VE, 6q3g:bE, 6q3g:dE, 6q3g:AG, 6q3g:DG, 6q3g:JG, 6q3g:LG, 6q3g:RG, 6q3g:TG, 6q3g:ZG, 6q3g:bG, 6q3g:hG, 6q3g:jG, 6q3g:CJ, 6q3g:DJ, 6q3g:CK, 6q3g:DK, 6q3g:AL, 6q3g:DL, 6q3g:JL, 6q3g:LL, 6q3g:RL, 6q3g:TL, 6q3g:ZL, 6q3g:bL, 6q3g:BJ, 6q3g:gL, 6q3g:CP, 6q3g:DP, 6q3g:AQ, 6q3g:DQ, 6q3g:JQ, 6q3g:LQ, 6q3g:RQ, 6q3g:TQ, 6q3g:YQ, 6q3g:AS, 6q3g:cQ, 6q3g:eQ, 6q3g:AR, 6q3g:DR, 6q3g:JR, 6q3g:LR, 6q3g:RR, 6q3g:TR, 6q3g:ZR, 6q3g:bR, 6q3g:hR, 6q3g:jR, 6q3g:BS, 6q3g:CS
26 1bjo:A 360 51 0.0987 0.0417 0.2941 9.0 1bjo:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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