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BioLiP
>protein
NRDWLRRDLSVIGFGLIGWLAPSSLPVINGNSLTGLFLGSIGPELAHFPTGPALTSPFWLWMVTWHVGLFIVLTFGQIGF
KGRQDGYW

The query sequence (length=88) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8htu:O 90 88 0.9659 0.9444 0.9659 1.61e-57 7ksq:O, 7ku5:O, 7xqp:O
2 8wgh:O 89 87 0.8295 0.8202 0.8391 1.01e-49
3 8j6z:O 86 85 0.7614 0.7791 0.7882 9.23e-45
4 5zji:O 76 86 0.6477 0.7500 0.6628 4.22e-33
5 7dz7:O 97 89 0.5341 0.4845 0.5281 2.14e-27 7d0j:O, 7dz8:O
6 6sl5:O 86 86 0.5227 0.5349 0.5349 2.27e-24
7 7yca:O 96 91 0.4432 0.4062 0.4286 1.21e-22
8 6fos:O 98 77 0.4545 0.4082 0.5195 1.32e-20 7blz:O, 8wey:O, 5zgb:O, 5zgh:O
9 6zzx:O 87 84 0.4545 0.4598 0.4762 2.38e-20
10 7y5e:ON 92 78 0.4318 0.4130 0.4872 5.07e-19 7y5e:O2, 7y7a:O7, 7y7a:Oo
11 8wm6:O 104 71 0.3523 0.2981 0.4366 2.14e-13 8wmv:O, 8wmw:O
12 7y7b:O 99 87 0.3636 0.3232 0.3678 1.78e-12 7y8a:O
13 7vb3:B 414 40 0.1591 0.0338 0.3500 0.004 7vb3:A, 7vb3:C, 7vb3:D, 7vb5:A, 7vb5:B, 7vb5:C, 7vb5:D, 7vb6:A, 7vb6:B, 7vb6:C, 7vb6:D
14 7nac:x 539 28 0.1136 0.0186 0.3571 1.8 7nad:x, 7r72:x, 7r7a:x
15 5fn0:A 455 58 0.1932 0.0374 0.2931 2.0 5fn0:B, 5fn0:C, 5fn0:D, 6fox:A, 6fox:B, 6foy:A, 6foy:B, 6foz:A, 6foz:B, 6fp0:A, 6fp0:B, 6fp1:A, 6fp1:B, 6fph:A, 6fph:B, 5mzc:A, 5mzc:B, 5mzi:A, 5mzi:B, 5mzk:A, 5mzk:B, 5n7t:A, 5n7t:B, 5na5:A, 5na5:B, 5nab:A, 5nab:B, 5nae:A, 5nae:B, 5nag:A, 5nag:B, 5nah:A, 5nah:B, 5nak:A, 5nak:B, 5x6p:A, 5x6p:B, 5x6q:A, 5y66:A, 5y77:A, 5y77:B, 5y7a:A
16 3h2x:A 302 72 0.2273 0.0662 0.2778 2.1 3brh:A, 3brh:B, 4j51:A, 4j51:B, 3olr:A, 3olr:B, 3olr:C, 3olr:D, 3omh:A, 3omh:B, 3omh:C, 3omh:D, 2qct:A
17 1v6a:A 332 31 0.1250 0.0331 0.3548 3.3 1v6a:B
18 5jpq:i 659 55 0.1932 0.0258 0.3091 3.5
19 1q2l:A 937 30 0.1250 0.0117 0.3667 4.2
20 5a8r:B 442 46 0.1705 0.0339 0.3261 5.6 5a8r:E, 5a8r:H, 5a8r:K, 5a8w:B, 5a8w:E, 5a8w:H, 5a8w:K
21 2c8s:A 149 55 0.2045 0.1208 0.3273 9.3

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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