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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
NPTDSFYEIELTVKAYEERYVDMAVNALRDLLMISFTPKKFSPMGQGRYAKDIEPNNPIDLYIPTTMERVKVDWKKTRFT
LIRGPFVDKRGMEQFERREYHSKIKASTTSLTELQWLLDALKLYEFTGVQIEAEVTSPGFVAAHEHQAVLKTSRPTHGEA
GDFVDSLFLDDQSSILDAGHLRHIKDFVPSGFGSEMQTALAALRNVMHQGLEERRRALGMNSGYDAWLRQQQRVGSATVT
KLFPASGLASSSSLLDEAATPADLSTLLLKSQIDSAAAVRDRKVAAFLAAVDAVFLNLRFDALEGHARFPFHFATAVPGQ
MKVPVAMWMQAVSKMAEYQRQVSEASQAADLLKAYTSYSAFSQALLYKLMQLWFETASSDAKEYLALPSWEEYEAMVQAK
R

The query sequence (length=401) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8a22:Bj 401 401 1.0000 1.0000 1.0000 0.0 8apn:Bj, 8apo:Bj
2 7pkq:j 164 131 0.1421 0.3476 0.4351 1.32e-32
3 6xyw:Bi 101 75 0.0648 0.2574 0.3467 0.002
4 8om2:J 162 60 0.0449 0.1111 0.3000 0.010 8d8k:J, 8d8l:J, 8om3:J, 8om4:J
5 5mrc:JJ 186 60 0.0449 0.0968 0.3000 0.011 5mre:JJ, 5mrf:JJ
6 5el5:1I 72 34 0.0349 0.1944 0.4118 0.099
7 7azo:S10A 99 55 0.0499 0.2020 0.3636 0.13 5a9z:BN, 5aa0:BN, 4aqy:J, 7azo:S10B, 7azs:S10A, 7azs:S10B, 9b00:1j, 9b00:2j, 4b3m:J, 4b3r:J, 4b3s:J, 4b3t:J, 6b4v:SA, 6b4v:WC, 6boh:TA, 6boh:YC, 6bok:RA, 6bok:UC, 5br8:J, 6buw:QJ, 6buw:XJ, 6bz6:QJ, 6bz6:XJ, 6bz7:QJ, 6bz7:XJ, 6bz8:QJ, 6bz8:XJ, 6c5l:AJ, 6c5l:CJ, 6cae:1j, 6cae:2j, 6cao:J, 6cap:J, 6caq:J, 6car:J, 6cas:J, 6cfj:1j, 6cfj:2j, 6cfk:1j, 6cfk:2j, 6cfl:1j, 6cfl:2j, 8cvj:1j, 8cvj:2j, 8cvk:1j, 8cvk:2j, 8cvl:1j, 8cvl:2j, 5czp:XJ, 5czp:QJ, 6czr:1j, 6czr:2j, 5d8b:KA, 5d8b:GC, 5dfe:XJ, 5dfe:QJ, 5dox:1j, 5dox:2j, 5doy:1j, 5doy:2j, 4dr1:J, 4dr2:J, 4dr3:J, 4dr4:J, 4dr5:J, 4dr6:J, 4dr7:J, 6dti:J, 4duy:J, 4duz:J, 7dug:J, 7duh:J, 7dui:J, 7duj:J, 7duk:J, 7dul:J, 4dv0:J, 4dv1:J, 4dv2:J, 4dv3:J, 4dv4:J, 4dv5:J, 4dv6:J, 4dv7:J, 2e5l:J, 5e7k:1I, 5e7k:1A, 5e81:1I, 5e81:1A, 8ekb:1j, 8ekb:2j, 5el4:1I, 5el4:1A, 5el6:1I, 5el6:1A, 5el7:1I, 5el7:1A, 8ev6:1j, 8ev6:2j, 8ev7:1j, 8ev7:2j, 2f4v:J, 5f8k:1j, 5f8k:2j, 8fc1:1j, 8fc1:2j, 8fc2:1j, 8fc2:2j, 8fc3:1j, 8fc3:2j, 8fc4:1j, 8fc4:2j, 8fc5:1j, 8fc5:2j, 8fc6:1j, 8fc6:2j, 5fdu:1j, 5fdu:2j, 5fdv:1j, 5fdv:2j, 1fjg:J, 6fkr:1j, 6fkr:2j, 8fom:QJ, 8fom:XJ, 8fon:QJ, 8fon:XJ, 8g29:1j, 8g29:2j, 8g2a:1j, 8g2a:2j, 8g2b:1j, 8g2b:2j, 8g2c:1j, 8g2c:2j, 8g2d:1j, 8g2d:2j, 4gkj:J, 4gkk:J, 6gsj:1I, 6gsj:1A, 6gsk:1I, 6gsk:1A, 6gsl:1I, 6gsl:1A, 6gzq:J2, 6gzx:J3, 6gzx:J4, 6gzz:J4, 6gzz:J3, 5hau:1j, 5hau:2j, 5hcp:1j, 5hcp:2j, 5hcq:1j, 5hcq:2j, 5hcr:1j, 5hcr:2j, 5hd1:1j, 5hd1:2j, 2hhh:J, 1hnw:J, 1hnx:J, 1hnz:J, 1hr0:J, 1i94:J, 1i95:J, 1i96:J, 1i97:J, 1ibk:J, 1ibl:J, 1ibm:J, 5ib7:1I, 5ib7:1A, 5ib8:1I, 5ib8:1A, 5ibb:1I, 5ibb:1A, 5imq:N, 5imr:N, 5iwa:J, 5j30:QJ, 5j30:XJ, 5j3c:QJ, 5j3c:XJ, 5j4b:1j, 5j4b:2j, 5j4c:1j, 5j4c:2j, 5j4d:SA, 5j4d:XC, 1j5e:J, 5j8b:j, 4ji0:J, 4ji1:J, 4ji2:J, 4ji3:J, 4ji4:J, 4ji5:J, 4ji6:J, 4ji7:J, 4ji8:J, 7jql:1j, 7jql:2j, 7jqm:1j, 7jqm:2j, 4jv5:J, 4jya:J, 4k0k:J, 4khp:J, 4kvb:J, 4l47:QJ, 4l47:XJ, 4l71:QJ, 4l71:XJ, 4lel:QJ, 4lel:XJ, 4lf4:J, 4lf5:J, 4lf6:J, 4lf7:J, 4lf8:J, 4lf9:J, 4lfa:J, 4lfb:J, 4lfc:J, 4lfz:QJ, 4lfz:XJ, 7lh5:AJ, 7lh5:CJ, 5lmn:J, 5lmo:J, 5lmp:J, 5lmq:J, 5lmr:J, 5lms:J, 5lmt:J, 5lmu:J, 5lmv:J, 4lnt:QJ, 4lnt:XJ, 4lsk:QJ, 4lsk:XJ, 4lt8:QJ, 4lt8:XJ, 7md7:1j, 7md7:2j, 6mkn:J, 6mpf:J, 6mpi:J, 6n1d:AS10, 6n1d:BS10, 1n32:J, 1n33:J, 1n34:J, 1n36:J, 6n9e:1j, 6n9e:2j, 6n9f:1j, 6n9f:2j, 5ndj:1I, 5ndj:1A, 5ndk:1I, 5ndk:1A, 6nd5:1j, 6nd5:2j, 6nd6:1j, 6nd6:2j, 6ndk:QJ, 6ndk:XJ, 6nsh:QJ, 6nsh:XJ, 6nta:QJ, 6nta:XJ, 6nuo:QJ, 6nuo:XJ, 6nwy:QJ, 6nwy:XJ, 4nxm:J, 4nxn:J, 6ny6:J, 6o3m:QJ, 6o3m:XJ, 6o97:1j, 6o97:2j, 6of1:1j, 6of1:2j, 6of6:QJ, 6of6:XJ, 6oj2:QJ, 6oj2:XJ, 6ope:QJ, 6ope:XJ, 6ord:QJ, 6ord:XJ, 6osi:QJ, 6osi:XJ, 3oto:J, 5ot7:I, 6otr:QJ, 6otr:XJ, 4ox9:J, 6oxa:QJ, 6oxa:XJ, 6oxi:QJ, 6oxi:XJ, 4p6f:QJ, 4p6f:XJ, 4p70:QJ, 4p70:XJ, 6q95:o, 6qnq:1I, 6qnq:1A, 6qnr:1I, 6qnr:1A, 7rq8:1j, 7rq8:2j, 7rq9:1j, 7rq9:2j, 7rqa:1j, 7rqa:2j, 7rqb:1j, 7rqb:2j, 7rqc:1j, 7rqc:2j, 7rqd:1j, 7rqd:2j, 7rqe:1j, 7rqe:2j, 3t1h:J, 3t1y:J, 8t8b:1j, 8t8b:2j, 8t8c:1j, 8t8c:2j, 4tua:QJ, 4tua:XJ, 4tub:QJ, 4tub:XJ, 4tuc:QJ, 4tuc:XJ, 4tud:QJ, 4tud:XJ, 4tue:QJ, 4tue:XJ, 7u2h:1j, 7u2h:2j, 7u2i:1j, 7u2i:2j, 7u2j:1j, 7u2j:2j, 6ucq:1j, 6ucq:2j, 8ud6:1j, 8ud6:2j, 8ud7:1j, 8ud7:2j, 8ud8:1j, 8ud8:2j, 6uo1:1j, 6uo1:2j, 5uq7:j, 5uq8:j, 2uu9:J, 2uua:J, 2uub:J, 2uuc:J, 8uvr:1j, 8uvr:2j, 8uvs:1j, 8uvs:2j, 2uxb:J, 2uxc:J, 2uxd:J, 7v2l:J, 7v2m:J, 7v2n:J, 7v2o:J, 7v2p:J, 7v2q:J, 4v49:AJ, 4v4a:AJ, 4v4g:AJ, 4v4g:CJ, 4v4g:EJ, 4v4g:GJ, 4v4g:IJ, 4v4i:k, 4v4j:k, 4v4p:BM, 4v4r:AJ, 4v4s:AJ, 4v4t:AJ, 4v4x:AM, 4v4y:AM, 4v4z:AM, 4v51:AJ, 4v51:CJ, 4v5a:AJ, 4v5a:CJ, 4v5c:AJ, 4v5c:CJ, 4v5d:AJ, 4v5d:CJ, 4v5e:AJ, 4v5e:CJ, 4v5f:AJ, 4v5f:CJ, 4v5g:AJ, 4v5g:CJ, 4v5j:AJ, 4v5j:CJ, 4v5k:AJ, 4v5k:CJ, 4v5l:AJ, 4v5m:AJ, 4v5n:AJ, 4v5p:AJ, 4v5p:CJ, 4v5q:AJ, 4v5q:CJ, 4v5r:AJ, 4v5r:CJ, 4v5s:AJ, 4v5s:CJ, 4v63:AJ, 4v63:CJ, 4v67:AJ, 4v67:CJ, 4v68:AJ, 4v6a:AJ, 4v6a:CJ, 4v6f:BM, 4v6f:CM, 4v6g:AM, 4v6g:CM, 4v7j:Aj, 4v7j:Bj, 4v7k:Aj, 4v7k:Bj, 4v7l:AJ, 4v7l:CJ, 4v7m:AJ, 4v7m:CJ, 4v7p:AJ, 4v7p:DJ, 4v7w:AJ, 4v7w:CJ, 4v7x:AJ, 4v7x:CJ, 4v7y:AJ, 4v7y:CJ, 4v7z:AJ, 4v7z:CJ, 4v83:AJ, 4v83:CJ, 4v84:AJ, 4v84:CJ, 4v87:BM, 4v87:CM, 4v8a:CJ, 4v8a:DJ, 4v8b:AM, 4v8b:CM, 4v8c:CM, 4v8c:DM, 4v8d:AM, 4v8d:CM, 4v8e:BM, 4v8e:DM, 4v8f:BM, 4v8f:CM, 4v8g:AJ, 4v8g:CJ, 4v8h:AJ, 4v8h:CJ, 4v8i:AJ, 4v8i:CJ, 4v8j:AJ, 4v8j:CJ, 4v8n:AJ, 4v8n:CJ, 4v8o:AJ, 4v8q:BJ, 4v8u:AJ, 4v8u:CJ, 4v8x:AJ, 4v8x:CJ, 5v8i:1j, 5v8i:2j, 4v90:AJ, 4v95:AJ, 4v95:CJ, 4v97:AJ, 4v97:CJ, 4v9a:AM, 4v9a:CM, 4v9b:AM, 4v9b:CM, 4v9h:AJ, 4v9i:AJ, 4v9i:CJ, 4v9j:AJ, 4v9j:CJ, 4v9k:AJ, 4v9k:CJ, 4v9l:AJ, 4v9l:CJ, 4v9m:AJ, 4v9m:CJ, 4v9n:AJ, 4v9n:CJ, 4v9q:BJ, 4v9q:DJ, 4v9r:AJ, 4v9r:CJ, 4v9s:AJ, 4v9s:CJ, 5vp2:1j, 5vp2:2j, 5vpo:QJ, 5vpo:XJ, 5vpp:QJ, 5vpp:XJ, 2vqe:J, 2vqf:J, 8vtu:1j, 8vtu:2j, 8vtv:1j, 8vtv:2j, 8vtw:1j, 8vtw:2j, 8vtx:1j, 8vtx:2j, 8vty:1j, 8vty:2j, 1vvj:QJ, 1vvj:XJ, 1vy4:AJ, 1vy4:CJ, 1vy5:AJ, 1vy5:CJ, 1vy6:AJ, 1vy6:CJ, 1vy7:AJ, 1vy7:CJ, 4w29:AJ, 4w29:CJ, 4w2e:j, 4w2f:AJ, 4w2f:CJ, 4w2g:AJ, 4w2g:CJ, 4w2h:AJ, 4w2h:CJ, 4w2i:AJ, 4w2i:CJ, 4w4g:QJ, 4w4g:XJ, 5w4k:1j, 5w4k:2j, 5wis:1j, 5wis:2j, 5wit:1j, 5wit:2j, 5wnp:J, 5wnq:J, 5wnr:J, 5wns:J, 5wnt:J, 5wnu:J, 5wnv:J, 4wpo:BJ, 4wpo:DJ, 4wq1:1I, 4wq1:1A, 4wqf:BJ, 4wqf:DJ, 4wqr:1I, 4wqr:1A, 4wqu:BJ, 4wqu:DJ, 4wqy:BJ, 4wqy:DJ, 4wr6:1I, 4wr6:1A, 4wra:1I, 4wra:1A, 4wro:1I, 4wsd:1I, 4wsd:1A, 4wsm:1I, 4wsm:1A, 4wt1:1I, 4wt1:1A, 4wt8:AJ, 4wt8:BJ, 4wu1:1I, 4wu1:1A, 4wzd:1I, 4wzd:1A, 4wzo:1I, 4x62:J, 4x64:J, 4x65:J, 4x66:J, 4xej:AS10, 4xej:BS10, 6xhv:1j, 6xhv:2j, 6xhw:1j, 6xhw:2j, 6xhx:1j, 6xhx:2j, 6xhy:1j, 6xhy:2j, 1xmo:J, 1xmq:J, 1xnq:J, 1xnr:J, 6xqd:1j, 6xqd:2j, 6xqe:1j, 6xqe:2j, 4y4o:1j, 4y4o:2j, 4y4p:1j, 4y4p:2j, 4yhh:J, 4ypb:QJ, 4ypb:XJ, 4yy3:J, 4yzv:QJ, 4yzv:XJ, 4z3s:1j, 4z3s:2j, 4z8c:1j, 4z8c:2j, 4zer:1j, 4zer:2j, 5zlu:E, 2zm6:J, 4zsn:QJ, 4zsn:XJ
8 8eep:A 221 120 0.0773 0.1403 0.2583 0.20 6axv:A, 6ay9:A, 6aya:A, 4b4n:A, 8cky:A, 8cl0:A, 8cl0:F, 8cl0:B, 8cl0:C, 8cl0:D, 8cl0:E, 8cl1:A, 8cl3:A, 3ds0:A, 3ds1:A, 3ds3:A, 3ds3:B, 3ds4:A, 4e91:A, 4e91:B, 4e92:A, 4e92:B, 8ejl:L, 8ejl:M, 8f22:A, 8f22:F, 8f22:B, 8f22:C, 8f22:D, 8f22:E, 8fiu:A, 8fiu:B, 8fiu:C, 8gdv:A, 8gdv:F, 8gdv:C, 8gdv:D, 8gdv:E, 5hgl:A, 5hgl:B, 5hgl:C, 5hgl:D, 5hgl:E, 5hgl:F, 4inb:A, 4j93:A, 2jpr:A, 7m9f:A, 7mkc:A, 3nte:A, 3nte:B, 4nx4:C, 6pu1:A, 4qnb:A, 8qub:A, 8quh:A, 8qui:A, 8quj:A, 8quk:A, 8qul:A, 8quw:A, 8qux:A, 8quy:A, 8qv1:A, 8qv4:A, 8qv9:A, 8qva:A, 7rhn:C, 7rj2:C, 7rj4:A, 7rj4:B, 7rj4:C, 7rmj:A, 7rmj:B, 7rmj:C, 7snl:A, 7snn:A, 7snq:A, 7snq:F, 7snq:B, 7snq:C, 7snq:D, 7snq:E, 7snq:G, 7snq:L, 7snq:H, 7snq:I, 7snq:J, 7snq:K, 8tov:G, 8tov:J, 8tov:I, 8tov:K, 8tov:L, 8tov:H, 8tov:A, 8tov:C, 8tov:B, 8tov:D, 8tov:E, 8tov:F, 8tqp:A, 8tqp:D, 8tqp:B, 8tqp:C, 8tqp:E, 8tqp:F, 8tqp:G, 8tqp:J, 8tqp:I, 8tqp:K, 8tqp:L, 8tqp:H, 5tsv:A, 5tsv:B, 5tsx:A, 5tsx:D, 5tsx:B, 5tsx:C, 5tsx:J, 5tsx:L, 5tsx:I, 5tsx:K, 5tsx:E, 5tsx:H, 5tsx:F, 5tsx:G, 4u0a:A, 4u0b:A, 4u0b:B, 4u0b:D, 4u0b:F, 4u0b:L, 4u0b:H, 4u0b:I, 4u0c:A, 4u0d:A, 4u0d:F, 4u0d:G, 4u0d:H, 4u0d:B, 4u0d:C, 4u0d:J, 4u0e:A, 4u0f:A, 7urn:A, 6v2f:A, 6v2f:B, 6v2f:C, 6v2f:D, 6v2f:E, 6v2f:F, 6vkv:A, 6vkv:B, 6vkv:C, 4wym:A, 4wym:F, 4wym:B, 4wym:C, 4wym:D, 4wym:E, 4wym:G, 4wym:H, 4wym:I, 4wym:J, 4wym:K, 4wym:L, 2xde:A, 2xde:B, 4xfz:A, 4xrq:A, 2xxm:A, 7zud:A
9 7ooc:I 101 71 0.0574 0.2277 0.3239 0.22 7p6z:I, 7pah:I, 7pai:I, 7paj:I, 7pak:I, 7pal:I, 7pam:I, 7pan:I, 7pao:I, 7paq:I, 7par:I, 7pas:I, 7ph9:I, 7pha:I, 7phb:I, 7phc:I, 7pi8:I, 7pi9:I, 7pia:I, 7pib:I, 7pic:I, 7pio:I, 7pip:I, 7piq:I, 7pir:I, 7pis:I, 7pit:I
10 8k9t:A 961 89 0.0549 0.0229 0.2472 0.33 8k9r:A
11 8fmw:J 102 59 0.0474 0.1863 0.3220 0.67
12 7jil:o 56 25 0.0299 0.2143 0.4800 0.82
13 8k9q:A 927 50 0.0349 0.0151 0.2800 2.3
14 4wzo:1A 66 20 0.0299 0.1818 0.6000 2.6 5el5:1A
15 2o4v:A 411 110 0.0823 0.0803 0.3000 2.8 2o4v:B, 2o4v:C
16 4wh3:A 356 80 0.0499 0.0562 0.2500 8.5 4ock:A, 4oco:A, 4ocp:A, 4ocv:A, 4wh2:A
17 8bob:C 412 69 0.0524 0.0510 0.3043 8.8 8bob:D
18 4i9e:A 383 58 0.0474 0.0496 0.3276 9.6 4i9c:A, 4i9e:B, 3ulq:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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