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BioLiP
>protein
NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPSLS
IIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQKGKKESVSRLLEKIDKRLSPKESEVLRLFAEGFLVTEI
AKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSV

The query sequence (length=197) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 5o8z:B 209 206 1.0000 0.9426 0.9563 1.40e-136 5o8z:A, 5vxn:A, 5vxn:B, 5vxn:C, 5vxn:D, 5w43:A, 5w43:B, 6zii:B, 6zii:A, 6zix:B, 6zix:A, 6zj2:D, 6zj2:C, 6zj2:B, 6zj2:A
2 4yn8:A 201 199 0.2995 0.2935 0.2965 1.23e-15
3 5hev:F 210 197 0.2741 0.2571 0.2741 9.86e-15 5hev:A, 5hev:B, 5hev:C
4 4if4:A 208 203 0.2589 0.2452 0.2512 8.61e-12 4if4:B, 4if4:C, 4if4:D, 7ve5:B, 7ve5:A, 7ve6:A, 7ve6:B
5 4ldz:A 196 190 0.2487 0.2500 0.2579 2.29e-09 5iuk:C, 5iul:C, 5iul:F, 4ldz:B, 4le0:A, 4le0:B, 7ssj:B, 7ssj:E, 7ssj:F
6 4zmr:A 207 189 0.2335 0.2222 0.2434 1.80e-06 4e7o:A, 4e7o:B, 4e7p:A, 4e7p:B, 4zmr:B, 4zms:A, 4zms:B
7 5xt2:B 204 158 0.1980 0.1912 0.2468 1.13e-05 5xt2:A, 5xt2:C, 5xt2:D, 5xt2:E
8 1j56:A 124 84 0.1421 0.2258 0.3333 2.12e-05 1krx:A
9 6ww6:B 192 193 0.2538 0.2604 0.2591 0.015 6wsh:A, 6wsh:B, 6ww6:A
10 1l5y:B 151 85 0.1269 0.1656 0.2941 0.063 1l5y:A
11 4hnq:A 124 86 0.1320 0.2097 0.3023 0.065 4hns:A, 4jp1:A, 4lx8:A, 3to5:A
12 4wu4:B 68 47 0.0863 0.2500 0.3617 0.070 4wu4:A, 4wuh:B, 4wuh:A, 4wul:A, 4wul:B
13 8a5r:AAA 206 68 0.1066 0.1019 0.3088 0.14 8a5s:AAA, 3p7n:A, 3p7n:B
14 7od9:B 129 119 0.1472 0.2248 0.2437 0.16 6ekg:Y, 6ekh:Y, 7od9:A
15 5lwk:A 122 123 0.1421 0.2295 0.2276 0.18 5lwk:B
16 4y13:A 244 58 0.0914 0.0738 0.3103 0.52 2avx:A, 4y15:A, 4y15:B, 4y15:C, 4y17:A, 4y17:B, 4y17:C
17 8ti7:A 132 48 0.0964 0.1439 0.3958 0.58 8ti7:C, 8ti7:E, 8ti7:K, 8ti7:G, 8ti7:I, 8ti7:O, 8ti7:M
18 3dzd:A 368 40 0.0711 0.0380 0.3500 1.2 3dzd:B
19 7r3g:B 236 47 0.0914 0.0763 0.3830 1.6 7r3g:A, 7r3h:B, 7r3h:A, 7r3i:A, 7r3i:B
20 4g2c:B 463 65 0.0914 0.0389 0.2769 1.8 4g2c:A
21 8p5d:SGG 319 53 0.0964 0.0596 0.3585 2.4 8p60:SGG, 8p60:RGG, 7qca:SGG
22 4q9n:A 295 38 0.0558 0.0373 0.2895 3.5 4q9n:B, 4q9n:C, 4q9n:D, 4q9n:E, 4q9n:F, 4q9n:G, 4q9n:H
23 6ugl:A 200 48 0.0863 0.0850 0.3542 3.9
24 8g8f:A 491 93 0.1168 0.0468 0.2473 4.0 8g8f:B, 8g8f:C, 8g8f:D, 8g8f:E, 8g8f:F, 8g8f:G, 8g8f:H, 8g9b:A, 8g9b:B, 8g9b:C, 8g9b:D, 8g9b:E, 8g9b:F, 8g9b:G, 8g9b:H, 6i0m:A, 6i0o:B, 6u8n:A, 6u8n:B, 6u8n:C, 6u8n:D, 6u8n:E, 6u8n:F, 6u8n:G, 6u8n:H, 6u8r:D, 6u8r:A, 6u8r:B, 6u8r:C, 6u8r:H, 6u8r:E, 6u8r:F, 6u8r:G, 6u9o:A, 6u9o:B, 6u9o:C, 6u9o:D, 6u9o:E, 6u9o:F, 6u9o:G, 6u9o:H, 6ua2:B, 6ua2:A, 6ua2:D, 6ua2:C, 6ua2:F, 6ua2:E, 6ua2:H, 6ua2:G, 6ua4:B, 6ua4:A, 6ua4:D, 6ua4:C, 6ua4:F, 6ua4:E, 6ua4:H, 6ua4:G, 6uaj:A, 6uaj:B, 6uaj:C, 6uaj:D, 6uaj:E, 6uaj:F, 6uaj:G, 6uaj:H, 6udo:A, 6udo:B, 6udo:C, 6udo:D, 6udo:E, 6udo:F, 6udo:G, 6udo:H, 6udq:A, 6udq:B, 6udq:C, 6udq:D, 6udq:E, 6udq:F, 6udq:G, 6udq:H
25 8fuz:A 390 74 0.0964 0.0487 0.2568 4.2 8foz:A, 8foz:B, 8foz:C, 8foz:D, 8foz:E, 8foz:F, 8foz:G, 8foz:H, 8fuz:B, 8fuz:C, 8fuz:D, 8fuz:E, 8fuz:F, 8fuz:G, 8fuz:H, 1jr1:B, 6u8e:A, 6u8e:B, 6u8e:C, 6u8e:D, 6u8e:E, 6u8e:F, 6u8e:G, 6u8e:H, 6u8s:A, 6u8s:B, 6u8s:C, 6u8s:D, 6u8s:E, 6u8s:F, 6u8s:G, 6u8s:H, 6ua5:A, 6ua5:B, 6ua5:C, 6ua5:D, 6ua5:E, 6ua5:F, 6ua5:G, 6ua5:H, 6udp:A, 6udp:B, 6udp:C, 6udp:D, 6udp:E, 6udp:F, 6udp:G, 6udp:H
26 7udu:D 701 51 0.0660 0.0185 0.2549 4.2 7rb8:D
27 6swl:A 133 62 0.1015 0.1504 0.3226 5.0 6swl:B
28 1nfb:A 396 80 0.1117 0.0556 0.2750 5.2 1nfb:B
29 1zlk:A 65 46 0.0711 0.2154 0.3043 5.2 1zlk:B
30 1je8:E 67 27 0.0508 0.1493 0.3704 5.7 1je8:A, 1je8:B, 1je8:F, 8u3b:G, 8u3b:H, 1zg1:A, 1zg1:B, 1zg1:E, 1zg1:F, 1zg5:A, 1zg5:B, 1zg5:E, 1zg5:F
31 6ont:A 121 89 0.1218 0.1983 0.2697 5.7
32 1b3o:B 410 74 0.0964 0.0463 0.2568 7.0
33 3bk7:A 593 35 0.0660 0.0219 0.3714 7.2 3j15:B, 5lw7:B, 1yqt:A, 5yv5:A
34 6uc2:A 453 74 0.0964 0.0419 0.2568 7.2 6i0m:B, 6i0o:A, 6uc2:B, 6uc2:C, 6uc2:D, 6uc2:E, 6uc2:F, 6uc2:G, 6uc2:H
35 4evi:A 360 47 0.0812 0.0444 0.3404 7.4 4e70:A, 4e70:B, 4evi:B
36 6xvu:D 141 75 0.1015 0.1418 0.2667 7.6 6xvu:A, 6xvu:C, 6xvu:B
37 1b3o:A 304 74 0.0964 0.0625 0.2568 7.8
38 1nf7:A 454 74 0.0964 0.0419 0.2568 8.0 1jr1:A, 1nf7:B
39 8d3i:A 439 71 0.0964 0.0433 0.2676 8.2 4bur:D, 8d3e:A, 8d3e:B, 8d3g:A, 8d3g:B, 8d3h:A, 8d3h:B, 8d3i:B, 8d3j:A, 8d3j:B, 8d3k:A, 8d3k:B, 8d3n:A, 8d3n:B, 8d3o:A, 8d3o:B, 3gd4:B, 5kvh:A, 5kvh:B, 8qns:D, 8qns:J
40 6ide:B 228 46 0.0812 0.0702 0.3478 8.4 6ide:A, 6kju:A, 6kju:B, 6ugl:B
41 6ifh:A 119 49 0.0660 0.1092 0.2653 9.3

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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