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BioLiP
>protein
NLPVTVAGLGPMGSALAAALLDRGHDVTVWNRSPGKAAPLVAKGARQADDIVDAVSASRLLVVCLADDALYSALGPAREA
LRGRVVVNLNSGTPKEANEALRWAERHGTGYLDGAIMVPPAMVGHPGSVFLYSGSAEVFEEYKETLAGLGDPVHLGTEAG
LAVLYNTALLSMMYSSMNGFLHAAALVGSAGVPAAEFTKLAVDWFLPAVIGQIIKAQAPTIDYPGDAGSLEMNVTTLKHI
IGTSQEQGVDTEIPVRNKELLDRAVAAGFGESSYYSVIELWR

The query sequence (length=282) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 5a9t:A 286 286 0.9965 0.9825 0.9825 0.0 5a9s:A, 5a9s:B, 5fwn:A, 5fwn:B
2 7og3:A 290 285 0.5603 0.5448 0.5544 7.01e-102 7og3:B
3 8j43:A 285 283 0.4929 0.4877 0.4912 7.64e-84 8j43:B
4 8hwy:A 287 283 0.5248 0.5157 0.5230 5.01e-83 8hwy:B, 8jku:A, 8jku:B
5 8jyt:C 286 283 0.4858 0.4790 0.4841 6.38e-75 8jyt:A, 8jyt:B, 8jyt:D
6 7osn:B 291 286 0.4468 0.4330 0.4406 5.60e-70 7osn:A, 7osn:C, 7osn:D, 7osn:E, 7osn:F
7 8bk1:A 288 286 0.4255 0.4167 0.4196 3.28e-68 8bj5:A, 8bj5:B, 8bj5:C, 8bj5:D, 8bk1:B, 8bk1:C, 8bk1:D
8 3zhb:D 294 292 0.4645 0.4456 0.4486 2.59e-66 3zhb:A, 3zhb:B, 3zhb:C
9 8j44:A 293 286 0.4362 0.4198 0.4301 2.78e-65 8j44:B, 8whg:B, 8whg:E, 8whg:F
10 8p2j:C 293 282 0.4291 0.4130 0.4291 2.55e-63 8ozv:A, 8ozw:A, 8ozw:B, 8p2j:A, 8p2j:B, 8p2j:D, 8p2j:E, 8p2j:F, 8p2j:G, 8p2j:H, 8p2j:I
11 8u05:B 290 287 0.4433 0.4310 0.4355 3.84e-63 8u05:A, 8u06:A, 8u06:B, 8u07:A, 8u07:B
12 5ocm:A 290 287 0.4433 0.4310 0.4355 1.32e-61 5ocm:F, 5ocm:B, 5ocm:C, 5ocm:D, 5ocm:E
13 4d3f:B 289 283 0.3652 0.3564 0.3640 1.33e-60
14 8qhe:A 284 283 0.3972 0.3944 0.3958 1.40e-60 6sle:A, 6sle:C, 6sle:H, 6sle:D, 6sle:E, 6sle:F, 6sle:G
15 6jiz:C 295 291 0.3972 0.3797 0.3849 4.87e-60 6jit:B, 6jit:C, 6jiz:B
16 7wnn:B 290 284 0.4220 0.4103 0.4190 2.15e-59 7wnn:A, 7wnw:B, 7wnw:A
17 4oqy:A 268 280 0.3830 0.4030 0.3857 8.75e-59
18 7y8m:B 288 284 0.4078 0.3993 0.4049 1.35e-54 7y8l:A, 7y8l:B, 7y8l:C, 7y8l:D, 7y8m:A, 7y8m:C, 7y8m:D, 7y8n:A, 7y8n:B, 7y8o:A, 7y8o:B
19 6eoi:B 287 285 0.4255 0.4181 0.4211 1.93e-54 6eod:A, 6eod:H, 6eod:B, 6eod:G, 6eod:C, 6eod:D, 6eoh:A, 6eoh:B, 6eoi:A, 6h7p:A, 6h7p:B, 5ojl:A
20 5g6r:B 289 286 0.3794 0.3702 0.3741 1.83e-53 5g6r:A, 5g6s:A, 5g6s:G, 5g6s:B, 5g6s:C, 5g6s:D, 5g6s:F, 5g6s:E, 5g6s:H
21 7xr5:A 289 285 0.4539 0.4429 0.4491 2.60e-47 7xr5:B, 7xr5:C, 7xr5:D
22 6sle:B 261 281 0.3723 0.4023 0.3737 8.93e-44
23 6toe:B 293 286 0.3546 0.3413 0.3497 4.45e-41 6to4:A, 6to4:D, 6to4:B, 6to4:C, 6toe:A, 6toe:F, 6toe:C
24 6smt:B 289 278 0.3511 0.3426 0.3561 4.47e-37 6smt:A, 6smt:C, 6smt:D, 6smt:E
25 8a3x:A 295 200 0.2837 0.2712 0.4000 1.61e-36 8a3x:B, 8a3x:C, 8a3x:D, 8a5z:A, 8a5z:B
26 7a3w:B 293 243 0.2872 0.2765 0.3333 1.54e-33 7a3w:A
27 3pdu:A 287 62 0.1170 0.1150 0.5323 2.32e-11 3pdu:B, 3pdu:C, 3pdu:D, 3pdu:F, 3pdu:E, 3pdu:G, 3pdu:H
28 2uyy:A 292 158 0.1454 0.1404 0.2595 4.95e-08 2uyy:D
29 3pef:A 287 294 0.2553 0.2509 0.2449 8.98e-08 3pef:B, 3pef:C, 3pef:D, 3pef:E, 3pef:F, 3pef:G, 3pef:H
30 3w6z:A 296 167 0.1454 0.1385 0.2455 6.47e-06 3w6u:A, 3ws7:A, 5xvh:A
31 5u5g:A 286 114 0.1454 0.1434 0.3596 1.24e-05 5u5g:B, 5u5g:C, 5u5g:D
32 2i9p:B 296 304 0.2128 0.2027 0.1974 0.001 2i9p:A, 2i9p:C, 2i9p:D
33 6smz:C 295 152 0.1206 0.1153 0.2237 0.009 6smy:A, 6smy:B, 6smy:C, 6smy:D, 6smz:A, 6smz:B, 6smz:D
34 2vq3:A 181 93 0.0957 0.1492 0.2903 0.017 2vq3:B
35 2ixp:C 316 40 0.0426 0.0380 0.3000 0.028 2ixp:A, 2ixp:B, 2ixp:D
36 1gpj:A 399 85 0.1064 0.0752 0.3529 0.047
37 2yjz:A 174 121 0.1170 0.1897 0.2727 0.050 2yjz:B, 2yjz:C, 2yjz:D
38 8c79:A 478 151 0.1241 0.0732 0.2318 0.10 8c79:B
39 1txg:A 335 29 0.0461 0.0388 0.4483 0.17 1txg:B
40 6bul:B 327 65 0.0674 0.0581 0.2923 0.41 6aqj:A, 6aqj:B, 6bul:A, 6c55:A, 6c55:B, 6c5n:A, 6c5n:B, 7ke2:B, 7ke2:A, 7kh7:A, 7kh7:B, 6vo2:A, 6vo2:B, 5w3k:A, 5w3k:B
41 3dtt:B 222 33 0.0496 0.0631 0.4242 0.42 3dtt:A
42 3fwn:A 467 40 0.0496 0.0300 0.3500 0.44 3fwn:B, 2zya:A, 2zya:B, 2zyd:A, 2zyd:B
43 6hcy:C 436 89 0.0780 0.0505 0.2472 0.52 6hcy:B, 6hcy:A, 6hd1:C, 6hd1:B, 6hd1:A
44 8i4q:A 479 39 0.0603 0.0355 0.4359 0.56 8i4q:B
45 7cb5:B 467 40 0.0567 0.0343 0.4000 0.73 7cb2:A, 7cb2:B, 7cb2:C, 7cb2:D, 7cb5:A, 7cb5:C, 7cb5:D
46 1lss:A 132 30 0.0355 0.0758 0.3333 0.82 1lss:B, 1lss:C, 1lss:D
47 7pua:FM 327 174 0.1596 0.1376 0.2586 1.0 6sga:FM, 6sgb:FM
48 2ofp:B 294 34 0.0461 0.0442 0.3824 1.1 2ofp:A, 1yjq:A, 1yon:A
49 8er0:A 371 37 0.0461 0.0350 0.3514 1.3 8er0:B, 8er1:A, 6wg9:A, 6wg9:B
50 3obb:A 295 184 0.1560 0.1492 0.2391 1.4 3q3c:A
51 2w90:B 471 96 0.0851 0.0510 0.2500 1.6 2w8z:A, 2w8z:B, 2w90:A
52 6vpb:B 324 68 0.0638 0.0556 0.2647 2.5
53 4b4o:A 295 28 0.0496 0.0475 0.5000 2.5 4b4o:B, 4b4o:C, 4b4o:D, 4b4o:E, 4b4o:F, 4b4o:G, 4b4o:H
54 4xr9:A 456 45 0.0638 0.0395 0.4000 2.8
55 3i3l:A 550 30 0.0496 0.0255 0.4667 3.0
56 2hk9:A 269 57 0.0603 0.0632 0.2982 3.0 2hk9:B, 2hk9:C, 2hk9:D
57 8ep7:C 328 65 0.0709 0.0610 0.3077 3.4 8ep7:A, 8ep7:B
58 5t9f:B 253 33 0.0390 0.0435 0.3333 3.5 5t95:A, 5t95:B, 5t9e:A, 5t9e:B, 5t9f:A, 5whx:A, 5whx:B
59 2bis:A 440 35 0.0532 0.0341 0.4286 3.7 2bis:C, 3fro:B, 3l01:A, 3l01:B
60 7yj0:D 622 31 0.0496 0.0225 0.4516 4.2 7yj0:A, 7yj0:B, 7yj0:C
61 3ttp:A 99 57 0.0638 0.1818 0.3158 4.9 3ttp:B
62 2iz1:B 471 38 0.0426 0.0255 0.3158 6.7 2iyo:A, 2iyp:A, 2iyp:B, 2iyp:C, 2iz0:A, 2iz0:B, 2iz0:C, 2iz1:A, 2iz1:C
63 6vr7:A 485 26 0.0426 0.0247 0.4615 7.6
64 1e6y:A 568 34 0.0532 0.0264 0.4412 7.8 1e6y:D, 8gf5:A, 8gf5:B
65 6l2i:A 324 92 0.0922 0.0802 0.2826 8.3 6l2i:B, 6l2z:A, 6l2z:B
66 1pjq:B 455 93 0.0993 0.0615 0.3011 8.5 6p5x:A, 6p5x:B, 6p5z:A, 6p5z:B, 6p7c:A, 6p7c:B, 6p7d:A, 6p7d:B, 1pjs:A, 1pjs:B, 1pjt:A, 1pjt:B, 6pqz:A, 6pqz:B, 6pr0:A, 6pr0:B, 6pr1:A, 6pr1:B, 6pr2:A, 6pr2:B, 6pr3:A, 6pr3:B, 6pr4:A, 6pr4:B, 6ulu:A, 6ulu:B, 6veb:A, 6veb:B
67 6qkg:B 664 30 0.0496 0.0211 0.4667 8.6 6qkg:A, 6qkr:A, 6qkr:B, 6qkx:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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