Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
NLNVGLIGGGFMGKAHSLAYAAMPMFFWPAPALPVRKVIAEANPELAAEAARRFGFENSTSDWRSIIDDPDIHVVDIATP
NHLHAEIAIAAAEAGKHIICEKPLARTGEESKAMYDAVKDKNIVHMVAFNYRRTPAVALAKKYIEEGAIGRILSFRGTYL
QDWSADPNSPLSWRFQKSIAGSGALGDIATHVIDMARYLVGEFSAVNAVLSTWIPERPLQRGGEGPKGPVDVDDEVMTMI
RFANGAVGSVEATRNAHGRNNYITFEIHGTEGSIVFNYERRDELQVAFASDQADRRGFRTVYTGPAHPYGEGLWPIPALG
IGYGETKIIEAHDFFKAIAEGGSVSPSFADGYQVALIDDAIVESAAKESWVDVPQISA

The query sequence (length=378) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6a3j:C 378 378 1.0000 1.0000 1.0000 0.0 6a3g:A, 6a3g:B, 6a3g:C, 6a3g:D, 6a3i:A, 6a3i:B, 6a3i:C, 6a3i:D, 6a3j:A, 6a3j:B, 6a3j:D
2 6ktk:C 368 364 0.3651 0.3750 0.3791 7.37e-68 6ktk:A, 6ktk:B, 6ktk:D, 6ktl:A, 6ktl:B, 6ktl:C, 6ktl:D, 5ya8:A, 5ya8:B, 5ya8:C, 5ya8:D, 5yap:A, 5yap:B, 5yap:C, 5yap:D, 5yaq:A, 5yaq:B, 5yaq:C, 5yaq:D
3 6jw7:A 342 274 0.2116 0.2339 0.2920 1.25e-25 6jw6:A, 6jw6:B, 6jw7:B, 6jw8:A, 6jw8:B
4 2glx:A 332 236 0.1931 0.2199 0.3093 1.95e-25 2glx:B, 2glx:C, 2glx:D, 2glx:E, 2glx:F
5 5a03:C 336 199 0.1825 0.2054 0.3467 2.18e-24 5a02:A, 5a02:B, 5a02:C, 5a02:D, 5a02:E, 5a02:F, 5a03:A, 5a03:B, 5a03:D, 5a03:E, 5a03:F, 5a04:A, 5a04:B, 5a04:C, 5a04:D, 5a04:E, 5a04:F, 5a05:A, 5a05:C, 5a05:D, 5a05:E, 5a05:B, 5a05:F, 5a06:A, 5a06:B, 5a06:C, 5a06:D, 5a06:E, 5a06:F
6 1h6d:A 383 218 0.1852 0.1828 0.3211 6.80e-23 1evj:A, 1evj:B, 1evj:C, 1evj:D, 1h6a:A, 1h6a:B, 1h6b:A, 1h6b:B, 1h6c:A, 1h6c:B, 1h6d:C, 1h6d:B, 1h6d:D, 1h6d:E, 1h6d:G, 1h6d:F, 1h6d:H, 1h6d:I, 1h6d:K, 1h6d:J, 1h6d:L, 1ofg:A, 1ofg:D, 1ofg:B, 1ofg:C, 1ofg:E, 1ofg:F, 1ryd:A, 1ryd:B, 1rye:A, 1rye:D, 1rye:B, 1rye:C
7 7xre:C 363 202 0.1587 0.1653 0.2970 6.71e-21 7xr9:A, 7xr9:B, 7xr9:C, 7xr9:D, 7xr9:E, 7xr9:F, 7xre:A, 7xre:B, 7xre:D, 7xre:E, 7xre:F
8 3e18:A 348 286 0.2302 0.2500 0.3042 1.96e-20 3e18:B
9 6o15:A 355 282 0.2143 0.2282 0.2872 4.06e-20 6o15:B
10 3q2k:K 322 238 0.1852 0.2174 0.2941 2.89e-18 3q2k:E, 3q2k:L, 3q2k:P
11 3q2k:C 347 238 0.1852 0.2017 0.2941 4.99e-18 3q2k:A, 3q2k:B, 3q2k:D, 3q2k:F, 3q2k:G, 3q2k:H, 3q2k:I, 3q2k:J, 3q2k:M, 3q2k:N, 3q2k:O
12 6nor:A 349 245 0.1746 0.1891 0.2694 1.56e-17 6nor:B, 6nor:C, 6nor:D, 6nor:E, 6nor:F
13 4koa:A 333 224 0.1640 0.1862 0.2768 5.43e-17
14 3cea:A 342 328 0.2116 0.2339 0.2439 7.63e-17 3cea:B, 3cea:C, 3cea:D
15 7d5m:A 389 240 0.1640 0.1594 0.2583 1.60e-16 7d5n:A, 7d5n:B
16 6z3c:AAA 379 241 0.1640 0.1636 0.2573 5.30e-15 6z3b:A, 6z3b:B, 6z3c:BBB
17 5uhw:A 342 382 0.2354 0.2602 0.2330 3.00e-14 5uhw:B, 5uhz:A, 5uhz:B, 5ui9:A, 5ui9:B, 5uia:A, 5uia:B, 5uib:A, 5uib:B
18 7x2y:A 342 189 0.1323 0.1462 0.2646 6.29e-14 7x1x:A, 7x1x:B, 7x2y:B
19 3q2i:A 345 237 0.1640 0.1797 0.2616 6.67e-14
20 4n54:A 340 280 0.1931 0.2147 0.2607 9.51e-13 4n54:B, 4n54:C, 4n54:D
21 1zh8:A 325 262 0.1746 0.2031 0.2519 1.04e-12 1zh8:B
22 8tdi:G 386 283 0.1693 0.1658 0.2261 2.51e-12 8tdi:L, 8tdi:J, 8tdi:A, 8tdi:C, 8tdi:D, 8tdi:E, 8tdi:F, 8tdi:H, 8tdi:I, 8tdi:B, 8tdi:K
23 3rc1:A 325 173 0.1296 0.1508 0.2832 2.53e-11 3rbv:A, 3rc2:A, 3rc7:A, 3rc9:A, 3rcb:A
24 5b3u:B 317 282 0.1852 0.2208 0.2482 3.26e-11 5b3v:B, 5b3v:A, 5b3v:C, 5b3v:D
25 3dty:A 374 234 0.1455 0.1471 0.2350 6.35e-11 3dty:E
26 3ec7:A 336 160 0.1270 0.1429 0.3000 2.02e-10 3ec7:B, 3ec7:C, 3ec7:D, 3ec7:E, 3ec7:F, 3ec7:G, 3ec7:H
27 4min:A 339 211 0.1561 0.1740 0.2796 2.91e-09 4min:B, 4min:C, 4min:D, 4mio:A, 4mio:B, 4mio:C, 4mio:D, 4miy:A, 4miy:B, 4miy:C, 4miy:D, 4mjl:A, 4mjl:B, 4mjl:C, 4mjl:D
28 9azo:A 315 99 0.0847 0.1016 0.3232 3.79e-09 9azo:B, 9azo:C, 9azo:D, 9azo:E, 9azo:F
29 2o4u:X 331 273 0.1481 0.1692 0.2051 4.33e-09 2poq:X
30 8qc8:D 339 209 0.1349 0.1504 0.2440 1.16e-06
31 8qc8:B 367 209 0.1349 0.1390 0.2440 1.34e-06 8qc2:A, 8qc2:B, 8qc2:C, 8qc2:D, 8qc8:C, 8qc8:A
32 8tdf:A 452 187 0.1217 0.1018 0.2460 7.06e-06 8tdf:B, 8tdf:C, 8tdf:D, 8tdh:B, 8tdh:C, 8tdh:D, 8tdh:A
33 3oa2:B 311 139 0.0952 0.1158 0.2590 9.59e-06 3oa2:A, 3oa2:C, 3oa2:D
34 3m2t:A 342 132 0.0873 0.0965 0.2500 1.17e-05 3m2t:B
35 8qc6:A 366 209 0.1270 0.1311 0.2297 6.45e-05 8qc3:A, 8qc3:B, 8qc5:A, 8qc5:B, 8qc6:B
36 7bvj:A 313 80 0.0582 0.0703 0.2750 7.45e-04 7bvj:B, 7bvj:C, 7bvj:D, 7bvk:A, 7bvk:B
37 4l8v:A 337 388 0.2381 0.2671 0.2320 0.001 4l8v:B, 4l8v:C, 4l8v:D, 3nt2:A, 3nt2:B, 3nt4:A, 3nt4:B, 3nt5:A, 3nt5:B, 3ntq:A, 3ntq:B, 3ntr:A, 3ntr:B
38 4nhe:B 326 151 0.1138 0.1319 0.2848 0.001 4nhe:A, 4nhe:C
39 2ixa:A 426 110 0.0847 0.0751 0.2909 0.002 2ixb:A
40 6t2b:B 439 110 0.0741 0.0638 0.2545 0.011 6t2b:A, 6t2b:C, 6t2b:D
41 7cgq:A 306 96 0.0688 0.0850 0.2708 0.016 7cgq:B, 7cgq:C, 7cgq:D, 7cgr:A, 7cgr:B, 7cgr:C, 7cgr:D, 6jnk:A, 6jnk:B, 6jnk:C, 6jnk:D
42 3o9z:A 310 151 0.1005 0.1226 0.2517 0.019 3o9z:B, 3o9z:C, 3o9z:D, 3oa0:A, 3oa0:B, 3oa0:C, 3oa0:D
43 7wbm:A 415 95 0.0741 0.0675 0.2947 1.4 7w3s:A, 7w3s:B, 7w3s:C, 7w3s:D, 7wbm:B
44 3tcf:A 517 63 0.0476 0.0348 0.2857 3.2 3tcf:B, 3tcf:C, 3tcf:D, 3tcf:E, 3tcf:F, 3tcf:G, 3tcf:H, 3tcg:A, 3tcg:B, 3tcg:C, 3tcg:D, 3tcg:E, 3tcg:F, 3tcg:G, 3tcg:H
45 7uww:A 632 50 0.0344 0.0206 0.2600 4.9 7uwu:A, 7uwu:B, 7uwv:A, 7uww:B
46 8iuf:V1 504 80 0.0635 0.0476 0.3000 6.5 8j9h:V1, 8j9i:V1, 8j9j:V1
47 2cwf:B 337 109 0.0741 0.0831 0.2569 9.8 2cwf:A, 2cwh:A, 2cwh:B

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218