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BioLiP
>protein
NISPWTITGFADAESSFMLTVSKDSKRNTGWSVRPRFRIGLHNKDVTILKSIREYLGAGIITSDIDARIRFESLKELEVV
INHFDKYPLITQKRADYLLFKKAFYLIKNKEHLTEEGLNQILTLKASLNLGLSEELKEAFPNTIPAERLLVTGQEIPDSN
WVAGFTAAEGSFYIRIAKNSTLKTGYQVQSVFQITQDTRDIELMKNLISYLNCGNIRIRTCVDLVVTNLNDIKEKIIPFF
NKNHIIGVKLQDYRDWCKVVTLIDNKEHLTSEGLEKIQKIKEGMNRGR

The query sequence (length=288) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6bci:A 292 289 0.9965 0.9829 0.9931 0.0 6bce:A, 6bcf:D, 6bcf:A, 6bcf:G, 6bcf:J, 6bcg:D, 6bcg:A, 6bcg:G, 6bcg:J, 6bch:A, 6bch:D, 6bch:H, 6bch:L, 6bcn:A, 6bcn:C, 6bcn:G, 6bcn:J, 6bct:A, 3r7p:A
2 6bci:A 292 139 0.1701 0.1678 0.3525 1.32e-13 6bce:A, 6bcf:D, 6bcf:A, 6bcf:G, 6bcf:J, 6bcg:D, 6bcg:A, 6bcg:G, 6bcg:J, 6bch:A, 6bch:D, 6bch:H, 6bch:L, 6bcn:A, 6bcn:C, 6bcn:G, 6bcn:J, 6bct:A, 3r7p:A
3 6uw0:B 295 295 0.5000 0.4881 0.4881 1.75e-96 6uw0:A, 6uwk:A
4 4yhx:A 294 298 0.5069 0.4966 0.4899 4.92e-96
5 6bd0:A 300 298 0.5000 0.4800 0.4832 1.40e-94 6bda:A, 6bdb:A, 3qqy:A, 6uvw:A, 6uvw:D, 6uwg:A, 6uwh:A, 6uwj:A
6 4lox:A 300 294 0.4792 0.4600 0.4694 1.06e-90 5e5o:A, 5e5s:A, 5e63:A, 5e67:A, 4z1z:A, 4z1z:B, 4z20:A, 4z20:D
7 5t2o:A 293 295 0.4861 0.4778 0.4746 4.97e-90
8 5thg:A 294 295 0.4792 0.4694 0.4678 3.76e-89 5thg:D
9 5t2h:A 296 295 0.4792 0.4662 0.4678 4.70e-88
10 5t8d:A 292 298 0.4896 0.4829 0.4732 5.73e-88 5v0q:A
11 7rcf:A 290 298 0.4861 0.4828 0.4698 1.07e-87 7rcc:D, 7rcc:A, 7rcc:G, 7rcd:A, 7rce:A, 7rcg:A
12 4yit:D 277 289 0.4792 0.4982 0.4775 8.48e-87 4yit:A
13 5t2n:A 291 295 0.4757 0.4708 0.4644 6.96e-86
14 5esp:A 292 292 0.4792 0.4726 0.4726 1.92e-84 5esp:B
15 4yis:A 295 295 0.4583 0.4475 0.4475 1.81e-81 4yis:B
16 4yis:A 295 129 0.1597 0.1559 0.3566 3.08e-15 4yis:B
17 4efj:B 291 298 0.4132 0.4089 0.3993 2.41e-74 4efj:A, 4z1x:B, 4z1x:A
18 4lq0:A 298 293 0.4028 0.3893 0.3959 1.16e-64
19 4lq0:A 298 133 0.1597 0.1544 0.3459 1.77e-16
20 3e54:A 159 128 0.1354 0.2453 0.3047 1.63e-06 3e54:B
21 3e54:A 159 125 0.1285 0.2327 0.2960 4.28e-06 3e54:B
22 3eh8:A 254 239 0.2153 0.2441 0.2594 5.40e-06 3eh8:D, 3eh8:G, 1p8k:Z, 2qoj:Z
23 2ex5:A 207 122 0.1007 0.1401 0.2377 1.96e-04 2ex5:B
24 2ex5:A 207 162 0.1424 0.1981 0.2531 8.8 2ex5:B
25 5a72:B 158 87 0.0868 0.1582 0.2874 3.53e-04 5a72:A, 5a74:A, 5a74:B, 5a77:A, 5a77:B, 5a78:A, 5a78:B
26 3uvf:A 255 243 0.2222 0.2510 0.2634 3.54e-04 3uvf:B
27 3uvf:A 255 98 0.0799 0.0902 0.2347 3.9 3uvf:B
28 1mow:A 248 113 0.1007 0.1169 0.2566 0.002 1mow:D, 1mow:G, 1mow:J
29 3mxa:A 301 73 0.0694 0.0664 0.2740 0.34 4aab:A, 4aab:B, 4aad:A, 4aad:B, 4aae:A, 4aae:B, 4aaf:A, 4aaf:B, 4aag:A, 4aag:B, 4aqu:A, 4aqu:B, 4aqx:A, 4aqx:B, 1bp7:A, 1bp7:B, 1bp7:C, 1bp7:D, 6fb0:A, 6fb0:B, 6fb1:A, 6fb1:B, 6fb2:A, 6fb2:B, 6fb5:A, 6fb5:B, 6fb6:A, 6fb6:B, 6fb7:A, 6fb7:B, 6fb8:A, 6fb8:B, 6fb9:A, 6fb9:B, 1g9y:A, 1g9y:B, 1g9z:A, 1g9z:B, 2i3p:A, 2i3p:B, 2i3q:A, 2i3q:B, 3mx9:A, 3mxb:A, 3mxb:B, 3mxb:R, 3mxb:S, 1n3e:A, 1n3e:B, 1n3e:G, 1n3e:H, 1n3f:A, 1n3f:B, 1n3f:G, 1n3f:H, 1t9i:A, 1t9i:B, 1t9j:A, 1t9j:B, 1u0c:A, 1u0c:B, 1u0d:A, 1u0d:B, 2vbj:A, 2vbj:B, 2vbl:A, 2vbl:B, 2vbn:A, 2vbn:B, 2vbo:A, 2vbo:B, 2xe0:A, 2xe0:B
30 3mxa:A 301 56 0.0486 0.0465 0.2500 2.7 4aab:A, 4aab:B, 4aad:A, 4aad:B, 4aae:A, 4aae:B, 4aaf:A, 4aaf:B, 4aag:A, 4aag:B, 4aqu:A, 4aqu:B, 4aqx:A, 4aqx:B, 1bp7:A, 1bp7:B, 1bp7:C, 1bp7:D, 6fb0:A, 6fb0:B, 6fb1:A, 6fb1:B, 6fb2:A, 6fb2:B, 6fb5:A, 6fb5:B, 6fb6:A, 6fb6:B, 6fb7:A, 6fb7:B, 6fb8:A, 6fb8:B, 6fb9:A, 6fb9:B, 1g9y:A, 1g9y:B, 1g9z:A, 1g9z:B, 2i3p:A, 2i3p:B, 2i3q:A, 2i3q:B, 3mx9:A, 3mxb:A, 3mxb:B, 3mxb:R, 3mxb:S, 1n3e:A, 1n3e:B, 1n3e:G, 1n3e:H, 1n3f:A, 1n3f:B, 1n3f:G, 1n3f:H, 1t9i:A, 1t9i:B, 1t9j:A, 1t9j:B, 1u0c:A, 1u0c:B, 1u0d:A, 1u0d:B, 2vbj:A, 2vbj:B, 2vbl:A, 2vbl:B, 2vbn:A, 2vbn:B, 2vbo:A, 2vbo:B, 2xe0:A, 2xe0:B
31 8gkf:F 97 48 0.0521 0.1546 0.3125 1.1
32 4mbb:A 184 35 0.0347 0.0543 0.2857 7.5 4nyh:A, 4nyh:B, 4nyh:C
33 7d4i:BE 890 21 0.0382 0.0124 0.5238 8.1 7aju:UU, 6zqd:UU, 6zqf:UU
34 7d5s:BE 865 21 0.0382 0.0127 0.5238 8.5 7ajt:UU, 6ke6:BE, 6lqp:BE, 6lqq:BE, 6lqu:BE, 7suk:LT, 5wlc:LT, 6zqa:UU, 6zqb:UU, 6zqc:UU
35 6lqs:BE 823 21 0.0382 0.0134 0.5238 8.7 7d63:BE, 6lqr:BE, 6lqt:BE, 6lqv:BE, 6nd4:T
36 5wyj:BE 753 21 0.0382 0.0146 0.5238 9.1 5wyk:BE
37 9bh5:Cf 117 28 0.0451 0.1111 0.4643 9.2 9cai:Cf
38 8t13:B 877 49 0.0625 0.0205 0.3673 9.8 3evg:A, 1l9k:A, 2p1d:A, 2p3l:A, 2p3o:A, 2p3q:A, 2p40:A, 2p41:A, 1r6a:A, 8t12:B, 7xd8:A, 7xd8:D, 7xd8:G, 7xd8:J, 7xd8:M, 7xd8:P, 7xd9:A, 7xd9:D, 7xd9:G, 7xd9:J, 7xd9:M, 7xd9:P, 5zqk:A, 5zqk:B
39 5tzs:T 749 21 0.0382 0.0147 0.5238 9.8

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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