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BioLiP
>protein
NCKPPYSFSCLIFMAIEDSPTKRLPVKDIYNWILEHFPYFANAPTGWKNSVRHNLSLNKCFKKVDGSLWCIDPEYRQNLI
QALKKTP

The query sequence (length=87) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6ncm:A 91 88 0.9885 0.9451 0.9773 1.91e-59 6nce:A, 6ncm:B
2 6el8:A 89 87 0.5747 0.5618 0.5747 3.77e-31 6el8:D
3 7cby:C 100 79 0.4598 0.4000 0.5063 8.94e-24
4 6ako:C 97 80 0.4253 0.3814 0.4625 1.16e-22 6akp:C, 6lbm:C, 6o3t:A, 6o3t:B
5 7vov:A 93 79 0.4368 0.4086 0.4810 3.95e-22 7vou:C, 7vov:B
6 2c6y:A 98 94 0.4943 0.4388 0.4574 4.43e-22 2c6y:B
7 8bzm:E 95 93 0.4598 0.4211 0.4301 1.99e-21 8bzm:I, 8bzm:A, 8bzm:J
8 7tdw:A 90 75 0.3678 0.3556 0.4267 7.22e-21 8sro:A, 8sro:C, 8sro:D, 8sro:B, 8srp:J, 8srp:G, 8srp:E, 8srp:D, 8srp:B, 8srp:A, 8srp:F, 8srp:C, 7tdx:A
9 7yze:A 87 82 0.4138 0.4138 0.4390 9.56e-21 5x07:F, 5x07:C, 5x07:L, 5x07:I, 7yzf:C
10 8vfy:O 102 82 0.4138 0.3529 0.4390 1.09e-20 8vfz:O, 8vfz:P, 8vg1:O, 8vg2:O, 7vox:A, 7vox:C, 7vox:H, 7vox:B, 1vtn:C
11 3qrf:G 82 79 0.3793 0.4024 0.4177 1.72e-20 3qrf:F, 3qrf:H, 3qrf:I, 4wk8:F, 4wk8:G
12 2a07:J 83 80 0.3793 0.3976 0.4125 5.22e-20 2a07:K, 2a07:F, 2a07:G, 2a07:H, 2a07:I, 2as5:F, 2as5:G
13 3g73:B 95 77 0.4253 0.3895 0.4805 9.73e-20 7fj2:A, 7fj2:B, 7fj2:E, 7fj2:F, 3g73:A
14 2hdc:A 97 81 0.4138 0.3711 0.4444 5.50e-18
15 7yzb:A 125 79 0.3448 0.2400 0.3797 1.53e-16
16 7yzg:A 121 79 0.3678 0.2645 0.4051 2.03e-16
17 2uzk:A 97 79 0.4023 0.3608 0.4430 5.91e-16 2uzk:C
18 3co6:C 91 85 0.4023 0.3846 0.4118 6.18e-16 3co7:C, 3co7:F, 3coa:C, 3coa:F, 5dui:A, 5dui:B, 6lbi:C, 6lbi:D, 6lbi:G, 6lbi:H, 6lbi:K, 6lbi:L, 4lg0:A
19 3l2c:A 85 69 0.3678 0.3765 0.4638 2.22e-15
20 7yza:A 122 79 0.3678 0.2623 0.4051 3.84e-15 7yz7:A, 7yzc:A, 7yzd:A
21 6rfl:Y 600 35 0.1264 0.0183 0.3143 0.24 7aoh:Y, 8c8h:Y
22 3bg6:A 577 49 0.1724 0.0260 0.3061 0.38 3bg6:B, 3bg6:C, 3bg6:D, 3bg6:E, 3bg6:F, 3bg6:G, 3bg6:H, 3bg7:A, 3bg7:B, 3bg7:C, 3bg7:D, 3bg7:E, 3bg7:F, 3bg7:G, 3bg7:H, 3bly:A, 2f5v:A, 2f6c:A, 3fdy:A, 2igk:A, 2igk:B, 2igk:C, 2igk:D, 2igk:E, 2igk:F, 2igk:G, 2igk:H, 2igm:A, 2igm:B, 2igm:D, 2igm:C, 2igm:E, 2igm:F, 2igm:G, 2igm:H, 2ign:A, 2ign:B, 2ign:D, 2ign:C, 2ign:E, 2ign:F, 2ign:H, 2ign:G, 2igo:A, 2igo:B, 2igo:D, 2igo:C, 2igo:E, 2igo:F, 2igo:H, 2igo:G, 3k4b:A, 3k4c:A, 3k4c:B, 3k4c:C, 3k4c:D, 3k4j:A, 3k4k:A, 3k4l:A, 3k4l:B, 3k4m:A, 3k4m:B, 3k4m:C, 3k4m:D, 3k4m:E, 3k4m:F, 3k4m:G, 3k4m:H, 3k4n:A, 3k4n:B, 3lsh:A, 3lsh:B, 3lsh:C, 3lsh:D, 3lsi:A, 3lsi:B, 3lsk:A, 3lsk:B, 3lsk:C, 3lsk:D, 3lsm:A, 3lsm:B, 4moe:A, 4moe:B, 4moe:C, 4moe:D, 4mof:A, 4mog:A, 4moh:A, 4moi:A, 4moi:B, 4moj:A, 4moj:B, 4moj:C, 4moj:D, 4mok:A, 4mok:B, 4mok:C, 4mok:D, 4mol:A, 4mol:B, 4mol:C, 4mol:D, 4mom:A, 4mom:B, 4mom:C, 4mom:D, 4moo:A, 4mop:A, 4mop:B, 4mop:C, 4mop:D, 4moq:A, 4moq:B, 4mor:A, 4mor:B, 4mor:C, 4mor:D, 4mos:A, 3pl8:A, 1tt0:A, 1tt0:B, 1tt0:C, 1tt0:D, 1tzl:A, 1tzl:B, 1tzl:C, 1tzl:D, 1tzl:E, 1tzl:F, 1tzl:G, 1tzl:H
23 6am0:F 178 37 0.1609 0.0787 0.3784 0.50 6am0:B
24 7aik:A 321 27 0.1149 0.0312 0.3704 4.4 7ail:A, 7q39:AAA, 7q3c:AAA
25 7qce:A 187 82 0.2299 0.1070 0.2439 4.7 7qce:B
26 3hl3:A 246 58 0.1724 0.0610 0.2586 5.3 4ecm:A
27 7xc2:C 858 38 0.1494 0.0152 0.3421 5.9 7xc2:A, 7xc2:E, 7xc2:G, 7xc2:I, 7xe0:A, 7xe0:C, 7xe0:E, 7xe0:G, 7xe0:I, 7xx2:A, 7xx2:C, 7xx2:E, 7xx2:G, 7xx2:I
28 6lyc:A 110 43 0.1264 0.1000 0.2558 6.5
29 8any:g 134 77 0.2184 0.1418 0.2468 7.0 7a5f:g3, 7a5g:g3, 7a5h:g, 7a5i:g3, 7a5j:g, 7a5k:g3, 5aj4:Bl, 4ce4:l, 6gaw:Bl, 6gb2:Bl, 6i9r:g, 3j7y:g, 3j9m:g, 8k2a:Lw, 8k2b:Lw, 7l08:g, 7l20:g, 7nqh:Bl, 7nql:Bl, 7nsh:Bl, 7nsi:Bl, 7nsj:Bl, 6nu2:g, 6nu3:g, 7o9k:g, 7o9m:g, 7odr:g, 7ods:g, 7odt:g, 7of0:g, 7of2:g, 7of3:g, 7of4:g, 7of5:g, 7of6:g, 7of7:g, 7og4:g, 7oi6:g, 7oi7:g, 7oi8:g, 7oi9:g, 7oia:g, 7oib:g, 7oic:g, 7oid:g, 7oie:g, 8oin:Bx, 8oiq:Bx, 8oir:Bx, 8oit:Bx, 5ool:g, 5oom:g, 7pd3:g, 8pk0:g, 7po4:g, 7qh6:g, 7qh7:g, 7qi4:g, 7qi5:g, 7qi6:g, 8qsj:g, 8qu5:g, 6vlz:g, 6vmi:g, 8xt0:Lw, 8xt1:Lw, 8xt2:Lw, 8xt3:Lw, 6ydp:Bl, 6ydw:Bl, 6zm5:g, 6zm6:g, 6zs9:g, 6zsa:g, 6zsb:g, 6zsc:g, 6zsd:g, 6zse:g, 6zsg:g
30 4nea:A 505 20 0.1264 0.0218 0.5500 7.0 5dib:A, 5dib:B, 5dib:C, 5dib:D, 5eyu:A, 5eyu:B, 5eyu:C, 5eyu:D, 5ez4:A, 5ez4:B, 5ez4:C, 5ez4:D, 4mpy:A, 4mpy:B, 4mpy:C, 4mpy:D, 4mpy:E, 4mpy:F, 4mpy:G, 4mpy:H, 4nea:B, 4nea:C, 4nea:D, 4qn2:A, 4qn2:B, 4qn2:C, 4qn2:D, 4qn2:E, 4qn2:F, 4qn2:G, 4qn2:H, 4zwl:A, 4zwl:B, 4zwl:C, 4zwl:D, 4zwl:E, 4zwl:F, 4zwl:G, 4zwl:H, 4zxu:A, 4zxu:B, 4zxu:C, 4zxu:D, 4zxu:E, 4zxu:F, 4zxu:G, 4zxu:H
31 3c7a:A 403 37 0.1379 0.0298 0.3243 9.1 3c7c:B, 3c7d:B, 3iqd:B
32 1vrg:A 515 40 0.1379 0.0233 0.3000 9.2 1vrg:B, 1vrg:C, 1vrg:D, 1vrg:E, 1vrg:F
33 6jmb:A 374 15 0.1034 0.0241 0.6000 9.8

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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