BioLiP

>protein
NAMKILFSPIGNTDPWRNDRDGAMLHIVRHYQPDRVVLFFTESIWQGQHFSGQQAFDWVKIIQSINENCQIEIKCDTIEV
ENDFDAYKDLFHQYLVEEKRKYPNAEIFLNVTSGTPQMETTLCLEYVTYPDKMRCIQVSTPLTKYAQADCQEVDLEIVNE
EESQQPSRCHKIAILSFREAIVRNQIKSLLDNYDYEAALQLVASQKSFRNGKEIRKKLKELIDDIKMHRVFSYLIKQYPR
NEKLQKALLHTILLEMRHQRGDIAETLIRVKSIAEYIVEQYIQKNYPYLIIYKEDKPYFNVSYSQELTESYLALMDSGFP
AYRDFLQLLEASNEMTNEMNKVNEINNLRNKVAHNLDSLNLDRDKNGRKITNAVTAVRTMLLAVFPEVQENDFHYLKQFN
QSIKELL

The query sequence (length=407) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	6tug:B	415	416	0.9926	0.9735	0.9712	0.0	6tug:A, 6tug:C, 6tug:D, 6tug:E, 6tug:F, 6tug:G, 6tug:H
2	8pe3:A	386	417	0.2776	0.2927	0.2710	3.79e-40	8pe3:B
3	8vlx:A	2431	219	0.1278	0.0214	0.2374	0.77
4	7u58:A	651	53	0.0344	0.0215	0.2642	2.3	7u58:B
5	7cfd:F	182	82	0.0688	0.1538	0.3415	3.5	7cfd:B, 7cfd:A, 7cfd:C, 7cfd:E, 7cfd:G, 7cfd:H, 7cfd:D
6	2bam:B	210	72	0.0418	0.0810	0.2361	4.0	2bam:A, 3bam:A, 3bam:B, 1bhm:A, 1bhm:B, 1esg:A
7	3akk:A	296	125	0.0762	0.1047	0.2480	6.3	3akk:B, 3akk:C, 3akk:D, 3akl:A, 3akl:B, 3akl:C, 3akl:D
8	7t3r:A	2130	206	0.1130	0.0216	0.2233	6.5	7t3r:B, 7t3r:C, 7t3r:D, 7t3t:A, 7t3t:B, 7t3t:C, 7t3t:D
9	3dzd:A	368	40	0.0344	0.0380	0.3500	7.5	3dzd:B
10	2xz7:A	324	41	0.0319	0.0401	0.3171	8.1	2xz9:A, 2xz9:B

[Back]