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BioLiP
>protein
NADVLAFGAHSDDVEIGMGGTIAKFVKQEKKVMICDLTEAELSSNGTVSLRKEEAAEAARILGADKRIQLTLPDRGLIMS
DQAIRSIVTVIRICRPKAVFMPYKKDRHPDHGNAAALVEEAIFSAGIHKYKDEKSLPAHKVSKVYYYMINGFHQPDFVID
ISDTIEAKKRSLNAYKSQFIPSKDSVSTPLTNGYIEIVEAREKLYGKEAGVEYAEGFFSKRMLMLDHDVLGG

The query sequence (length=232) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6p2t:A 232 232 1.0000 1.0000 1.0000 6.27e-174 6ull:A
2 2ixd:A 232 229 0.6164 0.6164 0.6245 2.44e-100 2ixd:B
3 3wl4:A 267 227 0.2888 0.2509 0.2952 2.45e-24 3wl4:B, 4xm0:A, 4xm0:B, 4xm0:C, 4xm0:D, 4xm0:E, 4xm0:F, 4xm1:A, 4xm1:B, 4xm1:C, 4xm1:D, 4xm1:E, 4xm1:F, 4xm2:A, 4xm2:B, 4xm2:C, 4xm2:D, 4xm2:E, 4xm2:F
4 8bgo:G 271 227 0.2845 0.2435 0.2907 3.79e-23 8bgn:A, 8bgn:B, 8bgn:C, 8bgo:A, 8bgo:H, 8bgo:K, 8bgo:B, 8bgo:E, 8bgo:L, 8bgo:C, 8bgo:I, 8bgo:J, 8bgo:F, 8bgo:D, 8bgp:A, 8bgp:B, 8bgp:C, 8bgp:D, 8bgp:E, 8bgp:F
5 5b2e:A 267 228 0.2716 0.2360 0.2763 1.15e-20 5b2e:B, 5b2e:C, 5b2f:A, 5b2f:B, 5b2f:C, 3we7:A, 3we7:B, 3we7:C, 3wl3:A, 3wl3:B, 3wl3:C
6 1q7t:A 310 135 0.1595 0.1194 0.2741 0.18 4ewl:A, 4ewl:B, 1q74:A, 1q74:B, 1q74:C, 1q74:D, 1q7t:B
7 3eps:A 566 46 0.0733 0.0300 0.3696 0.83 3eps:B, 6k5l:A, 6k5l:B, 3lc6:A, 3lc6:B, 3lcb:A, 3lcb:B, 4p69:A, 4p69:B
8 1n67:A 332 86 0.0862 0.0602 0.2326 2.5 2vr3:A, 2vr3:B
9 2i79:A 171 32 0.0647 0.0877 0.4688 2.9 2i79:B, 2i79:C, 2i79:D, 2i79:E, 2i79:F
10 7orm:A 2145 108 0.1164 0.0126 0.2500 3.1
11 6t9w:B 383 160 0.1681 0.1018 0.2437 4.2 8bxx:AA, 8bxx:BB, 8bxx:CC, 8bxx:DD, 6t9w:A, 6t9w:C, 6t9x:B, 6t9x:A, 6t9x:C, 6t9x:D, 6tb6:B
12 1svu:A 307 53 0.0647 0.0489 0.2830 7.3
13 6z8k:A 2158 112 0.1121 0.0120 0.2321 7.6 5amq:A, 7orn:A
14 6z6g:A 2142 114 0.1164 0.0126 0.2368 8.2 5amr:A
15 7ahe:C 382 55 0.0733 0.0445 0.3091 8.2 7ahd:C, 7ahd:D, 7ahe:D, 7ahh:C, 7ahh:D

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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