BioLiP

>protein
MVKPEEVDKAYEVAKQRYAEIGVDTDAAMKELEKVPLSVHCWQGDDIHGFLFPNYPGIARTPDELAGDMHEALSLIPGKH
RVQLHAIYAVTDKKRDLDTLEPEDFDYWIDWAKQEGVGLDFNGTFFSHPMVKDNMTVSSPDPKVRDFWIRHGKISREISN
YIGEKLGSQVVNNFWLPDGFKDNPIDKKTPRLRLLKALDEIIKDPLPEKNTIESFEGKLFGTGIESYTTGSHEFYQNYAI
SRNKLWTIDAGHFHPTEDVSDKFSAFFPFGKGLFMHVSRPVRWDSDHVVIMDDALIRITRSLVRDGYLDRTHIGLDFFDA
TINRVAAWVVGARATQKSLLQAMLAPIDQLKKDELNADFTTRLIETEELKSFPFGAVWDKFCQDHNTPVGFDWMNNIHQY
EKDVQFKR

The query sequence (length=408) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	8jq5:B	421	420	1.0000	0.9691	0.9714	0.0	8jq3:A, 8jq3:B, 8jq3:C, 8jq3:D, 8jq4:A, 8jq4:B, 8jq4:C, 8jq4:D, 8jq5:A, 8jq5:C, 8jq5:D, 8jq6:A, 8jq6:B, 8jq6:C, 8jq6:D
2	1de5:A	417	415	0.5025	0.4916	0.4940	2.90e-155	1d8w:A, 1d8w:B, 1d8w:C, 1d8w:D, 1de5:B, 1de5:C, 1de5:D, 1de6:A, 1de6:B, 1de6:C, 1de6:D
3	3uva:C	405	400	0.5025	0.5062	0.5125	6.01e-149	3uu0:A, 3uu0:B, 3uu0:C, 3uu0:D, 3uva:A, 3uva:B, 3uva:D, 3uxi:A
4	3m0v:C	433	276	0.1642	0.1547	0.2428	0.020	4gji:A, 4gji:B, 4gji:C, 4gji:D, 4gjj:A, 4gjj:B, 4gjj:C, 4gjj:D, 2hcv:A, 2hcv:B, 2hcv:C, 2hcv:D, 2i56:A, 2i56:B, 2i56:C, 2i56:D, 2i57:A, 2i57:B, 2i57:C, 2i57:D, 3itl:A, 3itl:B, 3itl:C, 3itl:D, 3ito:A, 3ito:B, 3ito:C, 3ito:D, 3itt:A, 3itt:B, 3itt:C, 3itt:D, 3itv:A, 3itv:B, 3itv:C, 3itv:D, 3itx:A, 3itx:B, 3itx:C, 3itx:D, 3iud:A, 3iud:B, 3iud:C, 3iud:D, 3iuh:A, 3iuh:B, 3iuh:C, 3iuh:D, 3iui:A, 3iui:B, 3iui:C, 3iui:D, 3m0h:A, 3m0h:B, 3m0h:C, 3m0h:D, 3m0l:A, 3m0l:B, 3m0l:C, 3m0l:D, 3m0m:A, 3m0m:B, 3m0m:C, 3m0m:D, 3m0v:A, 3m0v:B, 3m0v:D, 3m0x:A, 3m0x:B, 3m0x:C, 3m0x:D, 3m0y:A, 3m0y:B, 3m0y:C, 3m0y:D
5	7xvr:A	389	97	0.0588	0.0617	0.2474	1.3	7xvr:B, 7xvu:A, 7xvu:B, 7xvv:A, 7xvv:B, 7xvw:A, 7xvw:B
6	1g6i:A	510	49	0.0343	0.0275	0.2857	1.4
7	4c12:A	493	63	0.0515	0.0426	0.3333	2.3	4c13:A
8	7fgp:A	379	50	0.0294	0.0317	0.2400	2.7	7fgp:B
9	7r04:A	2326	66	0.0466	0.0082	0.2879	3.5
10	1knz:A	154	57	0.0343	0.0909	0.2456	3.6	1knz:B, 1knz:C, 1knz:D, 1knz:I, 1knz:J, 1knz:M, 1knz:N
11	7pgr:N	2423	66	0.0466	0.0078	0.2879	3.7	2d4q:A, 2d4q:B, 2e2x:B, 3p7z:B, 3pg7:B, 7pgq:F, 7pgr:F, 7pgs:F, 7pgt:F, 7pgu:F, 7pgu:N
12	1y79:1	680	75	0.0466	0.0279	0.2533	4.8
13	7scd:A	371	92	0.0637	0.0701	0.2826	5.3	3bd9:A, 7sce:A
14	7n7g:A	138	45	0.0343	0.1014	0.3111	8.2	7n7g:B

[Back]