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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
MTTADLILINNWHVVANVEDCKPGSITTARLLGVKLVLWRSQEQNSPIQVWQDYCPHRGVPLSMGEVANNTLVCPYHGWR
YNQAGKCVQIPAHPDMVPPASAQAKTYHCQERYGLVWVCLGNPVNDIPSFPEWDDPNYHKTYTKSYLIQASPFRVMDNSI
DVSHFPFIHDGWLGDRNYTKVEDFEVKVDKDGLTMGKYQFQTSWVNWFRLSHPLCQYCVSESPEMRIVDLMTIAPIDEDN
SVLRMLIMWNGSEMLESKMLTEYDETIEQDIRILHSQQPARLPLLAPGLPQEIHVPSDRGTVAYRRWLKELGVTYGVC

The query sequence (length=318) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6wn3:B 328 328 1.0000 0.9695 0.9695 0.0 7szh:A, 7szh:B, 7szh:C, 6wn3:A, 6wn3:C, 6wnb:A, 6wnb:B, 6wnb:C
2 7sze:B 329 329 0.8899 0.8602 0.8602 0.0 7sze:A, 7sze:C, 7szf:A, 7szf:B, 7szf:C, 7szg:A, 7szg:B, 7szg:C, 6wnc:A, 6wnc:B, 6wnc:C, 6wnd:A, 6wnd:B, 6wnd:C
3 6icl:A 338 312 0.2956 0.2781 0.3013 5.90e-34
4 6icn:A 344 326 0.2799 0.2587 0.2730 8.98e-31 6ick:A, 6ick:B, 6ick:C, 6icm:A, 6icm:B, 6icm:C, 6icn:B, 6icn:C, 6ico:A, 6ico:B, 6ico:C, 6icp:A, 6icp:B, 6icp:C, 6icq:A, 6icq:B, 6icq:C
5 7fhr:A 437 233 0.1887 0.1373 0.2575 1.88e-19
6 4qdc:A 369 174 0.1761 0.1518 0.3218 2.29e-18 4qdd:A, 4qdf:A
7 4qdf:B 357 173 0.1604 0.1429 0.2948 8.33e-18
8 3gob:A 342 164 0.1604 0.1491 0.3110 1.43e-16 3gb4:A, 3gb4:B, 3gb4:C, 3gke:A, 3gke:B, 3gl0:A, 3gl0:B, 3gl2:A, 3gl2:B, 3gob:B, 3gob:C, 3gte:A, 3gte:B, 3gte:C, 3gts:A, 3gts:B, 3gts:C, 6vsh:A, 6vsh:B
9 7qwt:A 352 165 0.1289 0.1165 0.2485 7.66e-16 7qwt:B, 7qwt:C, 7qwt:D, 7qwt:E, 7qwt:F, 7qwt:G, 7qwt:H, 7qwt:I
10 2zyl:A 359 168 0.1572 0.1393 0.2976 5.37e-15 4qck:A
11 6vsh:C 320 134 0.1415 0.1406 0.3358 2.08e-14 3gke:C, 3gl0:C, 3gl2:C
12 3n0q:A 402 116 0.1132 0.0896 0.3103 1.04e-11
13 7v28:B 425 162 0.1447 0.1082 0.2840 1.16e-10 7fjl:A, 7fjl:B, 7fjl:C, 7fjl:D, 7fjl:E, 7fjl:F, 7v25:B, 7v25:A, 7v25:C, 7v25:D, 7v25:E, 7v25:F, 7v28:A, 7v28:C, 7v28:D, 7v28:E, 7v28:F
14 3gcf:A 367 174 0.1509 0.1308 0.2759 7.34e-10 3gcf:B, 3gcf:C, 3gcf:D, 3gcf:E, 3gcf:F, 3gcf:G, 3gcf:H, 3gcf:I, 3gcf:J, 3gcf:K, 3gcf:L, 3gcf:M, 3gcf:N, 3gcf:O
15 2de6:B 390 173 0.1572 0.1282 0.2890 9.55e-10 7bug:A, 7bug:B, 7bug:C, 7bui:A, 7bui:B, 7bui:C, 2de5:A, 2de5:B, 2de5:C, 2de6:A, 2de6:C, 2de7:A, 2de7:B, 2de7:C, 6ll0:A, 6ll0:B, 6ll0:C, 6ll1:A, 6ll1:B, 6ll1:C, 6ll4:A, 6ll4:B, 6ll4:C, 6llf:A, 6llf:B, 6llf:C, 6llh:A, 6llh:B, 6llh:C, 6llk:A, 6llm:A, 4nb8:A, 4nb8:B, 4nb8:C, 4nb9:A, 4nb9:B, 4nb9:C, 4nba:A, 4nba:B, 4nba:C, 4nbb:A, 4nbb:B, 4nbb:C, 4nbc:A, 4nbc:B, 4nbc:C, 4nbd:A, 4nbd:B, 4nbd:C, 4nbe:A, 4nbe:B, 4nbe:C, 4nbf:A, 4nbf:B, 4nbf:C, 4nbg:A, 4nbg:B, 4nbg:C, 4nbh:A, 4nbh:B, 4nbh:C, 3vmg:A, 3vmg:B, 3vmg:C, 3vmh:A, 3vmh:B, 3vmh:C, 3vmi:A, 3vmi:B, 3vmi:C, 1ww9:A
16 3gkq:A 374 174 0.1635 0.1390 0.2989 1.39e-09 3gkq:B, 3gkq:C, 3gkq:D, 3gkq:E, 3gkq:F
17 4qur:A 415 137 0.1289 0.0988 0.2993 9.28e-08 5hl4:A, 4qup:A, 4quq:A, 3vca:A, 3vcp:A
18 1z01:A 427 127 0.1132 0.0843 0.2835 6.57e-07 1z01:B, 1z01:C, 1z01:D, 1z01:E, 1z01:F, 1z02:A, 1z02:B, 1z02:C, 1z02:D, 1z02:E, 1z02:F, 1z03:A, 1z03:B, 1z03:C, 1z03:D, 1z03:E, 1z03:F
19 2ckf:E 433 103 0.0849 0.0624 0.2621 2.06e-06 2ckf:C
20 6y9c:A 365 83 0.0818 0.0712 0.3133 3.53e-06 6y8s:A, 6y9d:A, 6y9d:B, 6y9d:C, 6y9d:D, 6y9d:E, 6y9d:F, 6y9d:G, 6y9d:H, 6y9d:I, 6y9d:J, 6y9d:K, 6y9d:L, 6zgp:A, 6zgp:B, 6zgp:C, 6zgp:D, 6zgp:E, 6zgp:F, 6zgp:G, 6zgp:H, 6zgp:I, 6zgp:J, 6zgp:K, 6zgp:L
21 6y8j:A 343 83 0.0818 0.0758 0.3133 4.28e-06
22 2gbw:A 449 103 0.0818 0.0579 0.2524 8.01e-06 2ckf:A, 2gbw:C, 2gbw:E, 2gbx:A, 2gbx:C, 2gbx:E
23 3en1:A 424 95 0.0849 0.0637 0.2842 1.30e-05 3eqq:A
24 1uli:C 425 75 0.0692 0.0518 0.2933 1.73e-05 1uli:A, 1uli:E, 1ulj:A, 1ulj:C, 1ulj:E
25 1eg9:A 447 75 0.0755 0.0537 0.3200 2.09e-05 4hjl:A, 4hkv:A, 2hmj:A, 2hmk:A, 2hml:A, 2hmm:A, 2hmn:A, 2hmo:A, 4hm0:A, 4hm1:A, 4hm2:A, 4hm3:A, 4hm4:A, 4hm5:A, 4hm6:A, 4hm7:A, 4hm8:A, 1ndo:A, 1ndo:C, 1ndo:E, 1o7g:A, 1o7h:A, 1o7m:A, 1o7n:A, 1o7p:A, 1o7w:A, 1uuv:A, 1uuw:A
26 2bmo:A 437 79 0.0755 0.0549 0.3038 4.81e-05 2bmq:A, 2bmr:A
27 1wql:A 436 51 0.0535 0.0390 0.3333 5.20e-05
28 2b1x:A 441 55 0.0597 0.0431 0.3455 5.52e-05 2b1x:C, 2b1x:E, 2b24:A, 2b24:C, 2b24:E
29 5aeu:A 433 51 0.0566 0.0416 0.3529 6.14e-05 5aeu:C, 5aeu:E, 5aeu:G, 5aew:A, 5aew:C, 5aew:E, 5aew:G, 5aew:I, 5aew:K, 5aew:M, 5aew:O, 5aew:Q, 5aew:S, 5aew:U, 5aew:W, 2xr8:A, 2xr8:C, 2xr8:E, 2xr8:G, 2xr8:I, 2xr8:K, 2xr8:M, 2xr8:O, 2xr8:Q, 2xr8:S, 2xr8:U, 2xr8:W, 2xrx:A, 2xrx:C, 2xrx:E, 2xrx:G, 2xrx:I, 2xrx:K, 2xrx:M, 2xrx:O, 2xrx:Q, 2xrx:S, 2xrx:U, 2xrx:W, 2xsh:A, 2xsh:C, 2xsh:E, 2xsh:G, 2xsh:I, 2xsh:K, 2xso:A, 2xso:C, 2xso:E, 2xso:G, 2xso:I, 2xso:K, 2xso:M, 2xso:O, 2xso:Q, 2xso:S, 2xso:U, 2xso:W, 2yfi:A, 2yfi:C, 2yfi:E, 2yfi:G, 2yfi:I, 2yfi:K, 2yfj:A, 2yfj:C, 2yfj:E, 2yfj:G, 2yfj:I, 2yfj:K, 2yfl:A, 2yfl:C, 2yfl:E, 2yfl:G, 2yfl:I, 2yfl:K
30 5xbp:A 444 79 0.0723 0.0518 0.2911 8.78e-05 5xbp:D, 5xbp:G
31 4nbb:E 114 108 0.0881 0.2456 0.2593 1.00e-04 7buh:A, 7bui:D, 7bui:E, 2de5:D, 2de5:E, 2de5:F, 2de6:D, 2de6:E, 2de6:F, 2de7:D, 2de7:E, 2de7:F, 6llf:D, 6llf:E, 6llf:F, 6llh:D, 6llh:E, 6llh:F, 4nb8:D, 4nb8:E, 4nb8:F, 4nb9:D, 4nb9:E, 4nb9:F, 4nba:D, 4nba:E, 4nba:F, 4nbb:D, 4nbb:F, 4nbc:D, 4nbc:E, 4nbc:F, 4nbd:D, 4nbd:E, 4nbe:D, 4nbe:E, 4nbf:D, 4nbf:E, 4nbf:F, 4nbg:D, 4nbg:E, 4nbg:F, 4nbh:D, 4nbh:E, 4nbh:F, 1vck:A, 3vmg:D, 3vmg:E, 3vmg:F, 3vmh:D, 3vmh:E, 3vmh:F, 3vmi:D, 3vmi:E, 3vmi:F
32 7yls:B 436 88 0.0723 0.0528 0.2614 3.41e-04 8h2t:B, 8h2t:D, 8h2t:G
33 3gzx:A 440 71 0.0692 0.0500 0.3099 4.71e-04 3gzy:A
34 7q05:E 409 110 0.0755 0.0587 0.2182 0.002 7q04:D, 7q04:E, 7q04:F, 7q05:D, 7q05:F, 7q06:D, 7q06:E, 7q06:F, 7vju:A, 7vju:C, 7vju:E
35 1sjg:A 112 52 0.0440 0.1250 0.2692 0.012 4p1b:H, 4p1b:I, 4p1c:H, 4p1c:I, 2q3w:A, 1vm9:A
36 7c8z:A 383 88 0.0723 0.0601 0.2614 0.025 7c8z:C, 7c8z:E, 7c8z:G
37 8jng:A 147 71 0.0566 0.1224 0.2535 0.041
38 8po7:A 594 137 0.1069 0.0572 0.2482 0.093
39 6rqf:L 179 40 0.0535 0.0950 0.4250 0.11 7qrm:D, 7qrm:L, 1rfs:A, 6rqf:D, 7zyv:D, 7zyv:L
40 5cxm:A 99 42 0.0472 0.1515 0.3571 0.17 5cxm:B, 5cxm:C, 5cxm:D
41 6zww:C 749 137 0.1069 0.0454 0.2482 0.18 8po7:B, 8po8:A, 8po8:B, 6zww:A, 6zww:E, 6zww:G
42 3azc:A 133 40 0.0535 0.1278 0.4250 0.20
43 7r0w:D 169 40 0.0566 0.1065 0.4500 0.29 7r0w:L, 7zxy:D, 7zxy:L
44 1q90:C 126 50 0.0660 0.1667 0.4200 0.31
45 2i7f:A 102 109 0.0818 0.2549 0.2385 0.42 2i7f:B
46 4h44:D 166 54 0.0660 0.1265 0.3889 0.97 4ogq:D, 2zt9:D
47 3d89:A 136 74 0.0566 0.1324 0.2432 1.1
48 8hn2:A 110 37 0.0440 0.1273 0.3784 1.6 8hn2:B
49 5bok:A 102 87 0.0629 0.1961 0.2299 1.7
50 8iuf:QE 231 51 0.0503 0.0693 0.3137 1.9 8iuf:Qe, 8iuj:QE, 8iuj:Qe
51 2wt0:A 300 55 0.0597 0.0633 0.3455 2.5 2wsv:A, 2wt1:A, 2wt2:A, 2wt2:B
52 2d2c:D 168 40 0.0472 0.0893 0.3750 2.8 2d2c:Q, 2e74:D, 2e75:D, 2e76:D, 4h0l:D, 4h13:D, 4i7z:D, 4pv1:D, 1vf5:D, 1vf5:Q
53 4aay:B 132 23 0.0377 0.0909 0.5217 2.9 4aay:D, 4aay:F, 4aay:H, 8ccq:B, 8ccq:D, 8ccq:F, 8ccq:H, 8ed4:B, 8ed4:D, 8ed4:F, 8ed4:H, 5nqd:B, 5nqd:D, 5nqd:F, 5nqd:H
54 6li0:A 441 54 0.0377 0.0272 0.2222 5.3 6li1:A
55 8hmp:R 285 54 0.0377 0.0421 0.2222 5.4
56 7qhm:A 402 45 0.0472 0.0373 0.3333 6.2 7q21:A, 7q21:a, 7qhm:N, 7qho:A, 7qho:N
57 8t76:A 1088 54 0.0535 0.0156 0.3148 6.4
58 8t6y:A 1148 54 0.0535 0.0148 0.3148 6.4 8t6o:A, 8t79:A
59 6li2:A 347 54 0.0377 0.0346 0.2222 7.1
60 6ujf:A 301 58 0.0535 0.0565 0.2931 7.2
61 2yiu:F 174 48 0.0472 0.0862 0.3125 8.9 2yiu:C
62 3s6t:A 575 41 0.0535 0.0296 0.4146 9.3 3nsn:A, 3ozo:A, 3ozp:A, 3vtr:A, 3wmb:A, 3wmc:A, 5y0v:A, 5y1b:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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