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BioLiP
>protein
MTSTFDRVATIIAETCDIPRETITPESHAIDDLGIDSLDFLDIAFAIDKAFGIKLPLEKWTQEVNDGKATTEQYFVLKNL
AARIDELVAAKGALEHHHHHH

The query sequence (length=101) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2ll8:A 101 101 1.0000 1.0000 1.0000 4.02e-71
2 2eht:A 77 54 0.2376 0.3117 0.4444 4.11e-11
3 8jfh:E 79 67 0.2277 0.2911 0.3433 1.29e-10 8jfn:B
4 6lvu:A 78 60 0.2277 0.2949 0.3833 6.55e-08 6lvu:B
5 2qnw:A 80 58 0.1980 0.2500 0.3448 1.11e-07
6 6sga:Fc 84 50 0.1683 0.2024 0.3400 3.86e-07 6sgb:Fc, 6yxy:EK
7 7ar7:T 84 54 0.1881 0.2262 0.3519 1.79e-06 7ar8:T, 8bq6:T
8 8e73:AB 85 51 0.1782 0.2118 0.3529 2.12e-06
9 2fac:A 77 54 0.1782 0.2338 0.3333 2.97e-06 2fac:B, 2fad:A, 2fad:B, 2fae:A, 4keh:C, 4keh:D, 1l0i:A, 6n3p:I, 6n3p:L, 6n3p:J, 3ny7:B, 7nyw:G, 7nyx:G, 7nyy:G, 7nyz:G, 7nz0:G, 7nz2:G1, 7nz2:G2, 7nz2:G3, 7nz2:G4, 7nz3:G1, 7nz3:G2, 7nz4:G1, 7nz4:G2, 1t8k:A, 5usr:K, 5vcb:f, 5vcb:e, 5vcb:d, 5vcb:F, 5vcb:D, 5vcb:X, 6w1d:C, 6w98:B
10 8bee:U 87 51 0.1584 0.1839 0.3137 3.24e-06 7aqr:U, 7arb:U, 8bpx:U, 8bq5:U, 8bq6:U
11 3gzl:A 81 56 0.1683 0.2099 0.3036 2.57e-05 2fq0:A, 2fq2:A, 3gzm:B
12 8ba0:U 85 51 0.1782 0.2118 0.3529 1.22e-04 8ba0:T, 8esz:AC
13 7zmb:Q 85 57 0.1782 0.2118 0.3158 1.46e-04 7zm7:O, 7zmb:O, 7zme:Q, 7zmg:O, 7zmg:Q
14 7ak6:U 88 51 0.1881 0.2159 0.3725 1.73e-04 7a5h:w, 7ak6:T, 8c2s:T, 8c2s:U, 8ca3:T, 8ca5:T, 8ca5:U, 6g2j:U, 6g72:U, 5gup:O, 5gup:X, 5lnk:j, 5lnk:X, 6odd:A, 7oi6:w, 7oi8:w, 7oie:w, 8olt:T, 8om1:U, 5ool:w, 5oom:w, 8pw7:T1, 8q0a:T, 8q0a:U, 8q0f:U, 8q0o:U, 8q1p:T, 8q1u:T, 8q1y:U, 8q25:T, 8q45:T, 8q46:T, 8q46:U, 8q47:T, 8q47:U, 8q49:U, 6q9b:AB, 6q9d:AA, 6qa9:AA, 6qa9:AB, 6qbx:AA, 6qbx:AB, 6qc5:AA, 6qc6:AA, 6qc7:AA, 6qc8:AB, 7qsd:T, 7qsl:T, 7qsn:T, 8qu5:w, 7r41:T, 7r43:T, 7r44:T, 7r45:T, 7r46:T, 7r47:T, 7r47:U, 7r48:T, 7r4c:T, 7r4d:T, 7r4f:U, 7r4g:T, 8rgt:T, 8ud1:1U, 8ueo:1T, 8ueo:1U, 8uep:1U, 8ueq:1T, 8ueq:1U, 8uer:1T, 8uer:1U, 8ues:1T, 8ues:1U, 8uet:1T, 8ueu:1T, 8ueu:1U, 8uev:1T, 8uew:1T, 8uew:1U, 8uex:1T, 8uex:1U, 8uey:1T, 8uey:1U, 8uez:1T, 8uez:1U, 8ugh:1U, 8ugi:1U, 8ugj:1U, 8ugn:1T, 8ugn:1U, 8ugn:5U, 8ugr:1U, 8ugr:5T, 8ugr:5U, 7v2d:X, 7v2f:X, 7v2k:X, 7v30:X, 7v32:X, 7v33:G, 7v3m:X, 7vbl:X, 7vbp:X, 7vwj:G, 7vwl:X, 7vy1:X, 7vye:X, 7vyi:X, 7vzv:X, 7w00:X, 7w0h:X, 7w1o:X, 7w1p:X, 7w20:X, 7w2k:X, 7w2l:X, 7w31:G, 7w32:X, 7w35:X, 7w4c:X, 7w4g:X, 7w4j:X, 7w4k:X, 7w4l:X, 7w4n:X, 7zdh:X, 7zdm:j, 7zdm:X, 7zdp:X, 7zdp:j, 6zka:X, 6zkb:X, 6zkc:X, 6zkd:j, 6zke:X, 6zkf:X, 6zkg:X, 6zkh:X, 6zkh:j, 6zki:X, 6zkj:X, 6zkk:X, 6zkl:X, 6zkm:X, 6zkm:j, 6zkn:X, 6zkn:j, 6zko:X, 6zkp:X, 6zkp:j, 6zkr:X, 6zks:X, 6zkt:X, 6zku:X, 6zr2:T, 6zr2:U, 6ztq:U
15 7b0n:U 88 36 0.1386 0.1591 0.3889 3.40e-04 6rfq:Q, 6rfr:Q, 6y79:Q
16 8iuf:AB 88 50 0.1485 0.1705 0.3000 7.43e-04 8j9h:AB, 8j9i:AB, 8j9j:AB
17 2koo:A 81 49 0.1584 0.1975 0.3265 0.001 2kop:A, 2koq:A, 2kor:A, 2kos:A
18 8iuf:AC 92 49 0.1584 0.1739 0.3265 0.002 8j9h:AC, 8j9i:AC, 8j9j:AC
19 2fva:A 82 56 0.1584 0.1951 0.2857 0.016
20 2x2b:A 76 58 0.1584 0.2105 0.2759 0.016
21 3zhm:A 79 70 0.1881 0.2405 0.2714 0.035
22 4bph:A 85 95 0.2376 0.2824 0.2526 0.058
23 2ale:A 132 60 0.1782 0.1364 0.3000 0.081 7ajt:CF, 7ajt:CG, 7aju:CF, 7aju:CG, 7d4i:3G, 7d4i:3H, 7d5s:3G, 7d5s:3H, 7d5t:3G, 7d5t:3H, 7d63:3G, 7d63:3H, 5gan:K, 5gap:K, 3jcm:M, 6ke6:3G, 6ke6:3H, 6lqp:3G, 6lqp:3H, 6lqq:3G, 6lqq:3H, 6lqr:3G, 6lqr:3H, 6lqs:3G, 6lqs:3H, 6lqt:3G, 6lqt:3H, 6lqu:3G, 6lqu:3H, 6lqv:3G, 6lqv:3H, 6nd4:e, 6nd4:f, 5nrl:K, 4nut:A, 7suk:SE, 7suk:SF, 5tzs:f, 5wlc:SE, 5wlc:SF, 5wyj:3G, 5wyj:3H, 5wyk:3G, 5wyk:3H, 6zqa:CF, 6zqb:CF, 6zqb:CG, 6zqc:CF, 6zqc:CG, 6zqd:CF, 6zqd:CG, 6zqe:CF, 6zqe:CG, 5zwm:M, 5zwo:M
24 7arc:U 84 25 0.0990 0.1190 0.4000 0.16 7ard:U
25 5hv8:A 95 36 0.1485 0.1579 0.4167 0.40
26 6kfu:A 527 59 0.1485 0.0285 0.2542 0.48 6kfm:A, 6kfm:B, 6kfr:A, 6kfr:B
27 7t29:A 453 65 0.1782 0.0397 0.2769 0.85
28 7me2:A 281 33 0.1287 0.0463 0.3939 0.98 7me1:A, 7me1:B, 7me2:B, 7me3:A, 7me3:B, 6q1d:A, 5uxs:A, 5uxu:A, 5uy0:A, 5uy4:A, 5uy5:A, 5uya:A, 5uyb:A, 5uyc:A, 5uyd:A, 5uye:A, 5uyf:A, 5uyg:A, 5uyh:A, 5uyv:A, 5uyw:A
29 7b0n:T 81 53 0.1782 0.2222 0.3396 2.9 6gcs:O, 7o6y:O, 6rfq:O, 6rfr:O, 6rfs:O, 6y79:O
30 4ihs:B 93 58 0.1683 0.1828 0.2931 3.6 4ihs:A, 4ihs:C, 4ihs:D, 4iht:A, 4iht:B, 4iht:C, 4iht:D
31 4url:A 364 28 0.1089 0.0302 0.3929 4.0 4url:B, 4urn:A, 4urn:B, 4urn:C
32 6ubl:A 211 49 0.1386 0.0664 0.2857 5.8 6ubl:B
33 7auf:A 89 95 0.2871 0.3258 0.3053 5.9

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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