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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
MTRYDSLLQALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATILEPTSG
NTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAGGSNTAVATAKELAATNPSWVMLYQYGNPANTDSHY
CGTGPELLADLPEITHFVAGLGTTGTLMGTGRFLREHVANVAIVAAEPRVPELYDPEILTARYSVGAVDAVRRTRELVHT
EGIFAGISTGAVLHAALGVGAGALAAGERADIALVVADAGWKYLSTGAYAGSLDDAE

The query sequence (length=297) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 3dwg:A 325 314 0.9966 0.9108 0.9427 0.0 3dwg:B, 3dwi:A, 3dwi:B, 5i6d:B, 5i6d:C, 5i6d:D, 5i7a:B, 5i7a:C, 5i7a:D, 5i7h:B, 5i7h:C, 5i7h:D, 5i7o:B, 5i7o:C, 5i7o:D, 5i7r:B, 5i7r:A, 5iw8:A, 5iw8:B
2 5iwc:A 297 295 0.9764 0.9764 0.9831 0.0 5i6d:A, 5i7a:A, 5i7h:A, 5i7o:A, 5iwc:B
3 2bht:A 294 303 0.4175 0.4218 0.4092 2.32e-62 2bhs:A, 2bhs:B, 2bhs:C, 2bhs:D, 2bht:B, 2bht:C, 2bht:D, 2jc3:A, 2jc3:H, 2jc3:B, 2jc3:C, 2jc3:D, 2jc3:E, 2jc3:F, 2jc3:G, 2v03:A
4 2eco:A 302 312 0.4209 0.4139 0.4006 4.55e-52 2ecq:A, 2efy:A, 2efy:B, 1ve1:A
5 5xoq:A 310 315 0.4074 0.3903 0.3841 1.31e-50 5xoq:B
6 2q3d:A 306 315 0.4040 0.3922 0.3810 2.08e-50 2q3c:A, 3zei:A
7 3x44:A 321 314 0.4074 0.3769 0.3854 4.77e-46 3x43:A, 3x43:B, 3x43:C, 3x43:D, 3x43:E, 3x43:F, 3x43:G, 3x43:H, 3x44:B
8 6c2h:A 345 319 0.3468 0.2986 0.3229 1.73e-45 6c2q:A, 6c2z:A, 6c4p:A
9 4aec:A 323 311 0.3771 0.3467 0.3601 2.72e-45 4aec:B
10 3vbe:C 329 315 0.3805 0.3435 0.3587 3.49e-45 3vbe:A, 3vbe:B, 3vbe:D, 3vc3:A, 3vc3:B, 3vc3:C, 3vc3:D, 3vc3:E, 3vc3:F
11 4lmb:A 310 309 0.3805 0.3645 0.3657 1.27e-44
12 5xem:A 302 309 0.3502 0.3444 0.3366 3.47e-44 5xem:B, 5xen:A, 5xen:B, 5xeo:A, 5xeo:B
13 5d84:A 318 309 0.3502 0.3270 0.3366 3.94e-44 5d85:A, 5d86:A, 5d87:A
14 2isq:A 320 315 0.3737 0.3469 0.3524 1.70e-43 1z7w:A, 1z7y:A
15 1d6s:A 322 328 0.3603 0.3323 0.3262 6.35e-43 1d6s:B, 1fcj:A, 1fcj:B, 1fcj:C, 1fcj:D, 1oas:A, 1oas:B, 6z4n:AAA, 6z4n:BBB
16 3bm5:A 338 314 0.3468 0.3047 0.3280 8.91e-43 3bm5:B, 4il5:A, 4jbl:B, 4jbn:A, 2pqm:A, 2pqm:B
17 3pc3:A 504 302 0.3569 0.2103 0.3510 3.07e-42 3pc2:A, 3pc4:A
18 8b9w:A 329 306 0.3636 0.3283 0.3529 3.58e-42 8b9w:B
19 6kr5:B 336 312 0.3434 0.3036 0.3269 5.14e-42 6kr5:A
20 7n2t:A 309 304 0.3805 0.3657 0.3717 2.19e-41
21 6vju:B 317 314 0.3603 0.3375 0.3408 1.45e-40
22 4air:A 304 294 0.3367 0.3289 0.3401 1.48e-40 4air:B
23 4lma:A 318 307 0.3636 0.3396 0.3518 2.51e-40 4lma:B
24 5ohx:A 488 273 0.3333 0.2029 0.3626 6.95e-40 5ohx:B
25 3t4p:A 319 317 0.3569 0.3323 0.3344 8.13e-40 3tbh:A
26 8s5h:A 507 312 0.3333 0.1953 0.3173 8.38e-40 4coo:A, 4coo:B, 1jbq:A, 1jbq:B, 1jbq:C, 1jbq:D, 1jbq:E, 1jbq:F, 4l0d:A, 4l0d:B, 4l27:B, 4l27:D, 4l27:A, 4l27:C, 4l28:A, 4l28:B, 4l28:C, 4l28:D, 4l3v:B, 4l3v:A, 4l3v:C, 1m54:A, 1m54:B, 1m54:C, 1m54:D, 1m54:E, 1m54:F, 5mms:A, 5mms:F, 5mms:B, 5mms:C, 5mms:D, 5mms:E, 4pcu:A, 4pcu:B, 7qgt:A, 7qgt:B, 8s5h:B, 8s5h:C, 8s5h:D, 8s5h:E, 8s5h:F, 8s5h:G, 8s5h:H, 8s5i:A, 8s5i:B, 8s5i:C, 8s5i:D, 8s5i:E, 8s5i:F, 8s5j:A, 8s5j:B, 8s5j:C, 8s5j:D, 8s5j:E, 8s5j:F, 8s5j:G, 8s5j:H, 8s5j:I, 8s5j:J, 8s5k:A, 8s5k:B, 8s5k:C, 8s5k:D, 8s5k:E, 8s5k:F, 8s5k:G, 8s5k:H, 8s5l:A, 8s5l:B, 8s5l:C, 8s5l:D, 8s5m:A, 8s5m:B, 8s5m:C, 8s5m:D, 8s5m:E, 8s5m:F, 8s5m:G, 8s5m:H, 8s5m:I, 8s5m:J, 8stw:A, 8stw:B, 8stw:C, 8stw:D, 8stw:E, 8stw:F, 4uuu:A, 4uuu:B
27 7xnz:B 458 309 0.3939 0.2555 0.3786 5.98e-39 7xnz:A, 7xnz:C, 7xnz:D, 7xoh:B, 7xoh:A, 7xoh:C, 7xoh:D, 7xoy:B, 7xoy:A, 7xoy:C, 7xoy:D
28 8b9y:C 330 311 0.3468 0.3121 0.3312 1.17e-38 8b9y:A, 8b9y:B, 8b9y:D
29 6ahi:B 306 316 0.3131 0.3039 0.2943 7.92e-38
30 7mfj:BBB 319 318 0.3569 0.3323 0.3333 4.61e-37
31 6xo2:A 294 294 0.3468 0.3503 0.3503 1.25e-35 7mfj:AAA, 6pmu:A, 6pmu:B
32 6xwl:C 477 315 0.3367 0.2096 0.3175 2.37e-35 6xwl:F, 6xwl:A, 6xwl:B, 6xwl:D, 6xwl:E, 6xyl:A, 6xyl:B, 6xyl:C, 6xyl:D, 6xyl:E, 6xyl:F, 6y21:D, 6y21:A, 6y21:B, 6z3s:D, 6z3s:A, 6z3s:B, 6zs7:D, 6zs7:A, 6zs7:B, 6zs7:C, 6zs7:E, 6zs7:F
33 5dbh:X 312 317 0.3737 0.3558 0.3502 1.12e-34 6aif:A, 5dbe:X, 7djq:A, 3iqg:X, 3iqh:X, 3iqi:X, 4li3:X, 4nu8:X, 4ore:X, 1y7l:A, 7yod:A, 7yoh:A, 7yoi:A, 7yol:A, 7yom:A, 4zu1:X, 4zu6:X
34 5b1i:A 303 258 0.2896 0.2838 0.3333 1.97e-34 5b1i:B, 5b1i:C, 5b1i:D, 5b1i:E, 5b1i:F, 5b1i:G, 5b1i:H
35 5z5c:B 336 285 0.3165 0.2798 0.3298 4.19e-30 5b53:A, 5b55:A, 5b55:B, 5z5c:A, 5z5c:C, 5z5c:D
36 8h4q:N 488 306 0.2896 0.1762 0.2810 3.60e-21 8h4h:N, 8h4h:A, 8h4q:A
37 5b36:B 383 272 0.2660 0.2063 0.2904 1.16e-16 5b36:A, 5b3a:A, 5b3a:B, 6l0p:A, 6l0p:B, 6l0p:C, 6l0p:D, 6l0q:A, 6l0q:B, 6l0q:C, 6l0q:D, 6l0r:A, 6l0r:B, 6l0r:C, 6l0r:D, 6l0s:A, 6l0s:B, 6l0s:C, 6l0s:D, 3vsa:A, 3vsa:B, 3vsc:A, 3vsc:B, 3vsd:A, 3vsd:B, 1wkv:A, 1wkv:B
38 7nbc:AAA 323 208 0.1818 0.1672 0.2596 3.18e-09 3hmk:A, 3hmk:B, 3l6b:A, 3l6c:A, 3l6c:B, 3l6r:A, 7nbc:BBB, 7nbc:CCC, 7nbc:DDD, 7nbd:AAA, 7nbd:BBB, 7nbd:DDD, 7nbd:CCC, 7nbf:AAA, 7nbf:CCC, 7nbf:BBB, 7nbf:DDD, 7nbg:AAA, 7nbg:BBB, 7nbg:CCC, 7nbg:DDD, 7nbh:AAA, 7nbh:BBB, 7nbh:CCC, 7nbh:DDD, 6slh:AAA, 6slh:BBB, 6slh:CCC, 6slh:DDD, 5x2l:A, 5x2l:B, 6zsp:AAA, 6zsp:BBB, 6zuj:AAA, 6zuj:BBB, 6zuj:CCC, 6zuj:DDD
39 6nmx:A 350 298 0.2660 0.2257 0.2651 3.28e-09 6cgq:A, 6cgq:B, 6nmx:B, 6nmx:C, 6nmx:D
40 8if7:A 342 167 0.1616 0.1404 0.2874 3.79e-07
41 8y1j:A 502 197 0.1549 0.0916 0.2335 3.22e-06 8y1j:B
42 1tdj:A 494 137 0.1212 0.0729 0.2628 6.25e-05
43 1pwh:A 327 123 0.1044 0.0948 0.2520 1.59e-04 1pwh:B, 1pwh:C, 1pwh:D
44 5cvc:A 329 177 0.1414 0.1277 0.2373 2.47e-04 5cvc:B, 5cvc:C
45 2d1f:A 349 149 0.1414 0.1203 0.2819 5.40e-04 2d1f:B
46 3aex:A 351 149 0.1515 0.1282 0.3020 0.001 3aex:B, 3aey:A, 3aey:B, 1uim:A, 1uim:B, 1uin:A, 1uin:B, 1v7c:A, 1v7c:B, 1v7c:C, 1v7c:D
47 5ygr:B 365 76 0.0741 0.0603 0.2895 0.047
48 5ygr:D 388 70 0.0741 0.0567 0.3143 0.048 5ygr:A, 5ygr:C
49 4qys:B 418 119 0.0943 0.0670 0.2353 0.11 6hte:B, 6hte:D, 4qys:A
50 2zsj:A 350 132 0.1178 0.1000 0.2652 0.19 2zsj:B, 2zsj:C, 2zsj:D
51 8cej:A 449 112 0.0909 0.0601 0.2411 0.72 8cej:B, 8cej:C, 8cej:D, 8cek:A, 8cek:B, 8cek:C, 8cek:D
52 5kvv:A 327 83 0.0943 0.0856 0.3373 1.3 5kvv:B
53 2zpu:A 319 102 0.0808 0.0752 0.2353 1.4 1v71:A, 1wtc:A, 2zr8:A
54 1ve5:A 308 80 0.0842 0.0812 0.3125 1.6 1ve5:B
55 2gn2:A 326 145 0.1077 0.0982 0.2207 2.3
56 2jbf:D 274 71 0.0808 0.0876 0.3380 2.5 2j8y:A, 2j8y:B, 2j8y:C, 2j8y:D, 2jbf:A, 2jbf:B, 2jbf:C
57 1f76:A 336 75 0.0774 0.0685 0.3067 3.1 1f76:B, 1f76:D, 1f76:E, 7t5k:A, 7t5k:B, 7t5y:A, 7t5y:B, 7t6c:A, 7t6c:B, 7t6h:A, 7t6h:B
58 4v4o:F 529 72 0.0673 0.0378 0.2778 3.1 4v4o:A, 4v4o:B, 4v4o:C, 4v4o:D, 4v4o:E, 4v4o:G, 4v4o:a, 4v4o:b, 4v4o:c, 4v4o:d, 4v4o:e, 4v4o:f, 4v4o:g
59 2p5v:G 158 32 0.0404 0.0759 0.3750 3.5 2p5v:A, 2p5v:B, 2p5v:C, 2p5v:E, 2p5v:D, 2p5v:F, 2p5v:H, 2p6s:A, 2p6s:G, 2p6s:B, 2p6s:D, 2p6s:C, 2p6s:F, 2p6s:E, 2p6s:H, 2p6t:A, 2p6t:G, 2p6t:B, 2p6t:D, 2p6t:C, 2p6t:F, 2p6t:E, 2p6t:H
60 3b8g:A 424 159 0.1313 0.0920 0.2453 6.9 3d2m:A, 3d2p:A, 3d2p:B, 4i49:A, 2r8v:A, 2r98:A
61 5vm2:A 347 52 0.0640 0.0548 0.3654 7.3 5vm2:B
62 4txd:A 336 102 0.1010 0.0893 0.2941 7.4
63 5k1s:A 358 62 0.0808 0.0670 0.3871 7.7 5k1s:C, 5k1s:B, 5k1s:D
64 4ouj:A 281 91 0.0606 0.0641 0.1978 8.0 4ouj:B
65 9enp:A 1072 54 0.0606 0.0168 0.3333 9.5 9enq:A, 8oja:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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