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BioLiP
>protein
MTQLTGDYAASWLPWIMIPLVFYILPFPVFAILFLWIQKEAS

The query sequence (length=42) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 7lx0:R 42 42 1.0000 1.0000 1.0000 1.03e-24 7lx0:I, 7lx0:i, 6pnj:I, 6pnj:R, 6pnj:i
2 6kmx:aI 41 40 0.7857 0.8049 0.8250 1.58e-19 6kmx:cI, 6kmx:bI
3 7s3d:I 42 40 0.6905 0.6905 0.7250 4.99e-17 7s3d:i, 7s3d:R
4 4fe1:I 38 38 0.4762 0.5263 0.5263 4.10e-08 7fix:I1, 7fix:I2, 7fix:I3, 1jb0:I, 6k33:aI, 6k33:bI, 6k33:cI, 6lu1:I, 7m75:I, 7m76:I, 7m78:I, 3pcq:I, 6pfy:I, 6pfy:R, 6pfy:e, 6pgk:I, 6pgk:R, 6pgk:e, 6tra:I, 6trc:I, 6trc:7, 6trc:i, 6trd:I, 6trd:7, 6trd:i, 5zf0:I1, 5zf0:I2, 5zf0:I3, 5zf0:I4, 5zf0:I5, 5zf0:I6
5 6kmw:aI 38 38 0.4286 0.4737 0.4737 5.05e-08 6kmw:cI, 6kmw:bI
6 6vpv:I 38 36 0.4286 0.4737 0.5000 3.69e-07 6vpv:i, 6vpv:7
7 8am5:i 40 39 0.4048 0.4250 0.4359 5.20e-07 8asl:i, 8asp:i, 6hqb:I, 4l6v:I, 4l6v:i, 4l6v:9, 6nwa:I, 6nwa:i, 6nwa:R, 5oy0:I, 5oy0:i, 5oy0:h, 7umh:I, 7umh:R, 7umh:i, 6uzv:I, 6uzv:i, 6uzv:h
8 6kif:I 38 38 0.4048 0.4474 0.4474 3.39e-06 6kif:S, 6kif:k, 6kig:I, 6kig:S, 6kig:k
9 8wey:I 32 31 0.4048 0.5312 0.5484 2.37e-05 7blz:I, 5zgb:I, 5zgh:I
10 7yca:I 35 32 0.4048 0.4857 0.5312 4.56e-04
11 7a4p:I 35 32 0.3333 0.4000 0.4375 0.002 6zzx:I, 6zzy:I
12 7dz7:I 42 31 0.3333 0.3333 0.4516 0.004 7bgi:I, 7blx:I, 8cmo:I, 7d0j:I, 7dz8:I, 6ijj:I, 6ijo:I, 6jo5:I, 6jo6:I, 7r3k:I, 7zq9:I, 7zq9:I2, 7zqc:I, 7zqd:I, 7zqd:I2
13 6k61:I 34 31 0.2857 0.3529 0.3871 0.007 6jeo:aI, 6jeo:bI, 6jeo:cI, 6jeo:dI, 6k61:i, 6tcl:I1, 6tcl:I2, 6tcl:I, 6tcl:II, 7y3f:I
14 7qco:I 39 33 0.2619 0.2821 0.3333 0.007 7qco:P, 7qco:p, 7qco:i
15 6l4u:I 35 32 0.3333 0.4000 0.4375 0.012
16 8htu:I 34 31 0.2857 0.3529 0.3871 0.034 7ksq:I, 7kux:I, 6l35:I, 7xqp:I
17 7dr0:I 30 28 0.2857 0.4000 0.4286 0.036 7dr1:I, 7dr2:aI, 7dr2:bI, 7dr2:cI, 7dr2:dI
18 7y7b:I 33 31 0.2857 0.3636 0.3871 0.058 7y8a:I
19 7y5e:IN 31 30 0.3095 0.4194 0.4333 0.085 7y5e:I2, 7y7a:I7, 7y7a:Io
20 8wm6:I 34 31 0.2619 0.3235 0.3548 0.091 8wmj:I, 8wmv:I, 8wmw:I
21 6igz:I 32 30 0.3095 0.4062 0.4333 0.11
22 7wfd:AI 33 30 0.3333 0.4242 0.4667 0.12 8j6z:I, 8j7a:I, 8j7b:I, 7wfe:BI, 7wg5:AI, 7wg5:BI
23 5mwc:D 275 16 0.1905 0.0291 0.5000 0.75
24 8c0t:A 281 16 0.1905 0.0285 0.5000 0.75
25 6xw2:A 387 16 0.1905 0.0207 0.5000 0.75
26 8osi:A 400 16 0.1905 0.0200 0.5000 0.75
27 8bcv:I 33 28 0.2857 0.3636 0.4286 0.83 8bcw:I, 7ew6:I, 7ewk:I, 7f9o:I, 7f9o:l, 5zji:I
28 1eyz:A 389 20 0.2381 0.0257 0.5000 3.1 1eyz:B, 1ez1:A, 1ez1:B, 1kj8:A, 1kj8:B, 1kj9:A, 1kj9:B, 1kji:A, 1kji:B, 1kjj:A, 1kjj:B, 1kjq:A, 1kjq:B
29 8hir:A 918 27 0.1905 0.0087 0.2963 5.0 8hir:B, 8hir:C, 8hir:D, 8hk6:A, 8hk6:B, 8hk6:C, 8hk6:D, 8hkf:A, 8hkf:B, 8hkf:C, 8hkf:D, 8hkk:A, 8hkk:B, 8hkk:C, 8hkk:D, 8hkm:A, 8hkm:B, 8hkm:C, 8hkm:D, 8hkq:D, 8hkq:A, 8hkq:C, 8hkq:B
30 8bd3:S 257 21 0.1905 0.0311 0.3810 5.8 8bd3:s
31 6ly5:i 33 28 0.2619 0.3333 0.3929 5.9 7dkz:I, 5l8r:I, 3lw5:I, 2o01:I, 2wsc:I, 2wse:I, 2wsf:I, 4xk8:i, 6yac:I, 6yez:I, 6zoo:I, 6zxs:I
32 8swn:A 1135 32 0.3571 0.0132 0.4688 6.6
33 2dwc:B 409 12 0.1905 0.0196 0.6667 7.8 2dwc:A
34 4e2x:A 405 15 0.1667 0.0173 0.4667 9.4 4e2w:A, 4e2y:A, 4e2z:A, 4e30:A, 4e31:A, 4e32:A, 4e33:A, 3ndi:A, 3ndj:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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