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BioLiP
>protein
MTASYLPSIFVPLIGLVFPAITMASLFIYIEQDE

The query sequence (length=34) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 8htu:I 34 34 1.0000 1.0000 1.0000 2.48e-18 7ksq:I, 7kux:I, 6l35:I, 7xqp:I
2 7yca:I 35 34 0.7353 0.7143 0.7353 1.90e-13
3 7a4p:I 35 34 0.6765 0.6571 0.6765 7.26e-13 6zzx:I, 6zzy:I
4 6igz:I 32 32 0.7353 0.7812 0.7812 7.75e-13
5 8wm6:I 34 34 0.7353 0.7353 0.7353 9.51e-13 8wmj:I, 8wmv:I, 8wmw:I
6 7y5e:IN 31 31 0.7059 0.7742 0.7742 1.85e-11 7y5e:I2, 7y7a:I7, 7y7a:Io
7 7wfd:AI 33 33 0.6471 0.6667 0.6667 3.09e-11 8j6z:I, 8j7a:I, 8j7b:I, 7wfe:BI, 7wg5:AI, 7wg5:BI
8 7y7b:I 33 33 0.6765 0.6970 0.6970 7.77e-11 7y8a:I
9 6l4u:I 35 34 0.5882 0.5714 0.5882 1.09e-10
10 8bcv:I 33 29 0.5882 0.6061 0.6897 1.91e-10 8bcw:I, 7ew6:I, 7ewk:I, 7f9o:I, 7f9o:l, 5zji:I
11 7qco:I 39 33 0.6471 0.5641 0.6667 3.50e-10 7qco:P, 7qco:p, 7qco:i
12 7dz7:I 42 30 0.5882 0.4762 0.6667 1.10e-09 7bgi:I, 7blx:I, 8cmo:I, 7d0j:I, 7dz8:I, 6ijj:I, 6ijo:I, 6jo5:I, 6jo6:I, 7r3k:I, 7zq9:I, 7zq9:I2, 7zqc:I, 7zqd:I, 7zqd:I2
13 6ly5:i 33 28 0.5294 0.5455 0.6429 3.33e-09 7dkz:I, 5l8r:I, 3lw5:I, 2o01:I, 2wsc:I, 2wse:I, 2wsf:I, 4xk8:i, 6yac:I, 6yez:I, 6zoo:I, 6zxs:I
14 7dr0:I 30 29 0.5882 0.6667 0.6897 4.20e-09 7dr1:I, 7dr2:aI, 7dr2:bI, 7dr2:cI, 7dr2:dI
15 8am5:i 40 32 0.5294 0.4500 0.5625 1.56e-08 8asl:i, 8asp:i, 6hqb:I, 4l6v:I, 4l6v:i, 4l6v:9, 6nwa:I, 6nwa:i, 6nwa:R, 5oy0:I, 5oy0:i, 5oy0:h, 7umh:I, 7umh:R, 7umh:i, 6uzv:I, 6uzv:i, 6uzv:h
16 8wey:I 32 32 0.5882 0.6250 0.6250 5.17e-08 7blz:I, 5zgb:I, 5zgh:I
17 6kif:I 38 31 0.5294 0.4737 0.5806 1.93e-07 6kif:S, 6kif:k, 6kig:I, 6kig:S, 6kig:k
18 6vpv:I 38 32 0.5000 0.4474 0.5312 1.32e-06 6vpv:i, 6vpv:7
19 6k61:I 34 32 0.5294 0.5294 0.5625 1.57e-06 6jeo:aI, 6jeo:bI, 6jeo:cI, 6jeo:dI, 6k61:i, 6tcl:I1, 6tcl:I2, 6tcl:I, 6tcl:II, 7y3f:I
20 6sl5:I 39 29 0.4412 0.3846 0.5172 1.30e-05
21 6kmw:aI 38 31 0.4118 0.3684 0.4516 3.89e-05 6kmw:cI, 6kmw:bI
22 4fe1:I 38 32 0.4118 0.3684 0.4375 4.89e-05 7fix:I1, 7fix:I2, 7fix:I3, 1jb0:I, 6k33:aI, 6k33:bI, 6k33:cI, 6lu1:I, 7m75:I, 7m76:I, 7m78:I, 3pcq:I, 6pfy:I, 6pfy:R, 6pfy:e, 6pgk:I, 6pgk:R, 6pgk:e, 6tra:I, 6trc:I, 6trc:7, 6trc:i, 6trd:I, 6trd:7, 6trd:i, 5zf0:I1, 5zf0:I2, 5zf0:I3, 5zf0:I4, 5zf0:I5, 5zf0:I6
23 8jjr:i 120 27 0.3529 0.1000 0.4444 0.004
24 8jze:i 119 27 0.3235 0.0924 0.4074 0.025 8jzf:i
25 7lx0:R 42 31 0.3529 0.2857 0.3871 0.027 7lx0:I, 7lx0:i, 6pnj:I, 6pnj:R, 6pnj:i
26 6kmx:aI 41 32 0.3529 0.2927 0.3750 0.11 6kmx:cI, 6kmx:bI
27 7s3d:I 42 32 0.3235 0.2619 0.3438 0.17 7s3d:i, 7s3d:R
28 7coy:aI 30 27 0.2941 0.3333 0.3704 0.64 7coy:bI, 7coy:cI
29 7e22:A 366 19 0.2941 0.0273 0.5263 1.8
30 6hrc:A 564 21 0.2941 0.0177 0.4762 8.3 6hrc:B, 6hrc:C, 6hrc:D, 5nbd:A, 5nbd:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218