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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
MSSRLEREAARRRTFAIISHPDAGKTTLTEKLLLFGGAIQMAGSVKARKAARHATSDWMAMERERGISVTTSVMQFPYRD
RVVNLLDTPGHQDFSEDTYRVLTAVDSALVVIDAAKGVEAQTRKLMDVCRMRATPVMTFVNKMDREALHPLDVMADIEQH
LQIECAPMTWPIGMGSSFKGTYDLLHKQLHLFSAIQSGIVIHGADDPQLDEYLGDQAEQLRMDLALLEEAGTPFDEERYL
KGELTPVFFGSAINNFGVREMLDMFVEFAPGPQPRPAATRVVEPGEEAFTGVVFKIQARMAFLRICSGTFTRGMRLKHHR
TGKDVTVANATIFMAQDRTGVEEAFPGDIIGIPNHGTIKIGDTFTESKEVLKFVGIPNFAPEHFRRVRLKNPLKAKQLQK
GLEQLAEEGAVQLFRPLVNNDYILGAVGVLQFDVIVARLADEYGVDAVYEGVSTHTARWVYCEDKKIFADFQDYHRGELA
VDAEGALAYLAPNPWRLESAMERYPKVEFRTTREIS

The query sequence (length=516) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 3vr1:A 516 516 1.0000 1.0000 1.0000 0.0 3vqt:A, 3vqt:B, 3vqt:C, 3vqt:D, 3vr1:B, 3vr1:C, 3vr1:D
2 8fzi:v 525 521 0.5969 0.5867 0.5912 0.0 8fzd:v, 8fzf:v, 8fzg:v, 8fzj:v, 6gwt:w, 6gxm:w, 6gxn:w, 6gxo:w, 6gxp:w, 2h5e:A, 2h5e:B, 6lkq:v, 7m5d:7, 4v85:AW, 4v89:AW, 4v8o:AY
3 3tr5:A 518 522 0.6008 0.5985 0.5939 0.0 3tr5:B, 3tr5:C, 3tr5:D
4 7siq:A 524 526 0.6143 0.6050 0.6027 0.0
5 7pao:9 682 471 0.2674 0.2023 0.2930 9.77e-56 7paq:9, 7par:9, 7pib:9, 7pis:9, 7pit:9
6 6vlz:v 712 475 0.2539 0.1840 0.2758 1.98e-46 7a5k:r1, 6vmi:v, 6ydp:BC, 6ydw:BC
7 4v9h:AY 622 481 0.2829 0.2347 0.3035 1.32e-44
8 7n2v:EF 704 485 0.2636 0.1932 0.2804 3.34e-42 3j9z:S1, 3ja1:S3, 7k51:8, 7k52:8, 7k54:8, 7k55:8, 7n2c:EF, 7otc:w, 7pjv:x, 7pjw:x, 7pjy:x, 7pjz:x, 7ss9:8, 7ssd:8, 7ssl:8, 7st7:8, 7ug7:EF, 4v7b:AY, 4v7d:BZ, 4v9o:BV, 4v9o:DV, 4v9o:FV, 4v9o:HV, 4v9p:BV, 4v9p:DV, 4v9p:FV, 4v9p:HV
9 5hau:1z 730 487 0.2771 0.1959 0.2936 6.68e-39 2bm0:A, 2bm1:A, 1fnm:A, 6gzq:H1, 6gzx:H1, 6gzx:H2, 6gzz:H1, 6gzz:H2, 5hau:2z, 4m1k:A, 4myt:A, 4myu:A, 2om7:L, 5ot7:U, 6q95:G, 6ucq:1v, 6ucq:2v, 4v5f:AY, 4v5f:CY, 4v5m:AY, 4v5n:AY, 4v6t:AY, 4v8u:AY, 4v8u:CY, 4v90:AY, 4v9j:AY, 4v9j:CY, 4v9k:AY, 4v9k:CY, 4v9l:AY, 4v9l:CY, 4v9m:AY, 4v9m:CY, 4w29:AY, 4w29:CY, 4wpo:BZ, 4wpo:DZ, 4wqf:BZ, 4wqf:DZ, 4wqu:BZ, 4wqu:DZ, 4wqy:BZ, 4wqy:DZ
10 4v6v:A1 639 444 0.2364 0.1909 0.2748 1.90e-38
11 5ty0:A 378 395 0.2151 0.2937 0.2810 5.90e-37
12 2bv3:A 632 390 0.2229 0.1820 0.2949 1.47e-35 1dar:A
13 7nsh:BC 700 478 0.2461 0.1814 0.2657 1.70e-35 7l20:w
14 3j9y:w 639 450 0.2287 0.1847 0.2622 1.93e-35 5kcs:1w
15 8p2f:E 670 480 0.2481 0.1910 0.2667 3.37e-35 8p2g:E, 8p2h:E
16 7pjx:x 522 484 0.2461 0.2433 0.2624 1.00e-34
17 1efg:A 592 400 0.2267 0.1976 0.2925 2.42e-34 2efg:A
18 4fn5:A 670 477 0.2539 0.1955 0.2746 7.38e-34
19 7cdw:A 683 478 0.2364 0.1786 0.2552 2.61e-31 7cdw:B
20 8dmf:A 718 429 0.1899 0.1365 0.2284 1.35e-26 7uvp:A
21 2dy1:A 660 467 0.2422 0.1894 0.2677 1.08e-23 1wdt:A
22 5j8b:z 671 157 0.1047 0.0805 0.3439 4.91e-21 5imq:B
23 5j8b:z 671 337 0.1492 0.1148 0.2285 1.65e-07 5imq:B
24 5imr:C 570 157 0.1047 0.0947 0.3439 5.15e-21
25 5imr:C 570 233 0.1105 0.1000 0.2446 2.43e-05
26 5aa0:BZ 605 216 0.1357 0.1157 0.3241 3.22e-20 5a9z:CA, 4zck:A, 4zcl:A, 4zcl:B, 4zcm:A, 4zcm:B
27 8hl1:AEFG 725 146 0.0969 0.0690 0.3425 4.00e-17 8hl2:AEFG, 8hl3:AEFG, 8hl4:AEFG
28 8hl1:AEFG 725 157 0.0678 0.0483 0.2229 6.4 8hl2:AEFG, 8hl3:AEFG, 8hl4:AEFG
29 3jce:x 586 157 0.1066 0.0939 0.3503 5.91e-17 3deg:C
30 3jce:x 586 186 0.0833 0.0734 0.2312 1.8 3deg:C
31 5a9y:A 562 188 0.1163 0.1068 0.3191 1.33e-15 5a9x:A
32 5anb:K 1120 146 0.0833 0.0384 0.2945 1.69e-14 5anc:K
33 5anb:K 1120 98 0.0465 0.0214 0.2449 8.5 5anc:K
34 8cf5:Aa 842 155 0.0988 0.0606 0.3290 2.30e-14 8cdr:Aa, 8ceh:Aa, 8cg8:Aa, 8civ:Aa, 8cku:Aa, 8cmj:Aa, 2e1r:A, 8eub:DC, 8evq:DC, 8evr:DC, 8evs:DC, 8ewb:DC, 6gq1:AZ, 6gqb:AZ, 6gqv:AX, 5it7:1, 5juo:DC, 5jup:DC, 5jus:DC, 5jut:DC, 5juu:DC, 8k2d:CD, 1n0u:A, 2npf:A, 2npf:B, 7osa:eEF2, 7osm:eEF2, 2p8w:T, 2p8x:T, 2p8y:T, 2p8z:T, 1u2r:A, 4v4b:AT, 1zm2:E
35 8q87:A 857 159 0.0969 0.0583 0.3145 2.39e-13 6d9j:9, 6gz3:Ct, 6gz4:Ct, 6gz5:Ct, 3j7p:4, 7ls1:m, 7ls2:m, 6mtd:v, 6mte:v, 7oyc:v2, 4v6x:Az, 8xsx:CB, 6z6m:CB, 6z6n:CB
36 8q87:A 857 184 0.0678 0.0408 0.1902 6.3 6d9j:9, 6gz3:Ct, 6gz4:Ct, 6gz5:Ct, 3j7p:4, 7ls1:m, 7ls2:m, 6mtd:v, 6mte:v, 7oyc:v2, 4v6x:Az, 8xsx:CB, 6z6m:CB, 6z6n:CB
37 4w2e:y 644 157 0.0891 0.0714 0.2930 4.13e-13
38 4w2e:y 644 337 0.1492 0.1196 0.2285 1.74e-07
39 8y0w:CB 768 155 0.0950 0.0638 0.3161 4.24e-13 8y0x:CB
40 5h7l:A 694 136 0.0891 0.0663 0.3382 7.35e-13 5h7k:A, 5h7l:B
41 5h7l:A 694 160 0.0756 0.0562 0.2437 5.53e-04 5h7k:A, 5h7l:B
42 2ywf:A 532 162 0.0969 0.0940 0.3086 2.13e-12 2ywg:A, 2ywh:A
43 2ywf:A 532 237 0.1124 0.1090 0.2447 1.44e-05 2ywg:A, 2ywh:A
44 4v6w:Az 837 157 0.0969 0.0597 0.3185 2.37e-12
45 6ji2:A 432 148 0.0891 0.1065 0.3108 7.45e-12 4cxg:A, 4cxh:A, 6ji2:E, 3vmf:A, 3wxm:A, 3wxm:C, 3wxm:E, 3wxm:G
46 6u45:A 726 494 0.2171 0.1543 0.2267 1.18e-11 6u43:A, 6u44:A, 6u44:B, 6u45:B
47 7old:C 813 141 0.0891 0.0566 0.3262 4.89e-11
48 7old:C 813 160 0.0659 0.0418 0.2125 0.17
49 5lzw:jj 425 149 0.0853 0.1035 0.2953 7.55e-11 5lzx:jj, 5lzy:jj, 5lzz:jj
50 6htw:B 385 133 0.0795 0.1065 0.3083 2.46e-10 6htw:H, 6i8r:A
51 1b23:P 405 128 0.0795 0.1012 0.3203 2.49e-10 2c77:A, 2c78:A, 1eft:A, 1exm:A, 4h9g:A, 1ha3:A, 4lbv:A, 4lbw:A, 4lby:A, 4lbz:A, 4lc0:A, 1mj1:A, 1ob5:A, 1ob5:C, 1ob5:E, 2p8w:S, 2p8x:S, 2p8z:S, 1ttt:A, 1ttt:B, 1ttt:C, 1tui:A, 1tui:B, 1tui:C, 4v5l:AZ, 4v8q:BZ
52 3p27:B 444 145 0.0736 0.0856 0.2621 7.48e-10 3p27:A
53 4ncl:B 435 136 0.0756 0.0897 0.2868 8.13e-10 4ncl:A, 4ncn:A, 4ncn:B, 4tmt:A, 4tmt:B, 4tmv:B, 4tmv:A, 4tmw:A, 4tmw:B, 4tmx:A, 4tmx:B, 4tmz:B, 4tmz:A, 4tn1:B, 4tn1:A
54 6gfu:A 386 135 0.0775 0.1036 0.2963 1.74e-09 5w76:A, 5w7q:A
55 1g7s:A 576 137 0.0756 0.0677 0.2847 4.14e-09 1g7t:A
56 2lkd:A 178 160 0.0795 0.2303 0.2562 4.15e-09
57 8bsi:a 815 136 0.0814 0.0515 0.3088 4.23e-09
58 7oyd:v 726 144 0.0814 0.0579 0.2917 6.01e-09
59 7paj:9 393 129 0.0775 0.1018 0.3101 1.40e-08 7pak:9, 7pha:9, 7pi9:9, 7pip:9
60 4zv4:A 392 128 0.0795 0.1046 0.3203 2.64e-08 4zv4:B
61 8ro2:C 908 141 0.0736 0.0419 0.2695 2.88e-08 7aav:r, 7abf:r, 7abg:r, 7abi:r, 6ah0:C, 6ahd:C, 8c6j:C, 8ch6:b, 7dvq:C, 6ff4:B, 6ff7:B, 9fmd:C, 8h6e:5C, 8h6j:5C, 8h6k:5C, 8h6l:5C, 8i0p:C, 8i0r:C, 8i0s:C, 8i0t:C, 8i0u:C, 8i0v:C, 8i0w:C, 6icz:C, 6id0:C, 6id1:C, 8q7q:C, 8q7v:C, 8q7w:C, 8q7x:C, 8q91:C, 6qdv:C, 8qp8:C, 7qtt:b, 6qw6:5C, 6qx9:5C, 8rc0:C, 7w59:C, 7w5a:C, 7w5b:C, 5xjc:C, 8y6o:D, 5yzg:C, 5z56:C, 5z57:C, 5z58:C, 6zym:B
62 1ob2:A 393 133 0.0756 0.0992 0.2932 3.21e-08 1d8t:A, 1d8t:B, 1dg1:G, 1dg1:H, 1efc:A, 1efc:B, 6eze:A, 6eze:B, 8fr3:A, 8fr3:B, 2fx3:A, 4g5g:A, 8g7p:z, 8g7q:z, 5jbq:A, 5mi3:A, 5mi3:B, 5mi8:A, 5mi8:B, 5mi9:A, 5mi9:B, 4p3y:A, 8qfs:C, 8qhc:C, 3u2q:A, 3u6k:A, 3u6k:B, 5uyk:Z, 5uyl:Z, 5uym:Z, 5uyn:Z, 5uyp:Z, 5uyq:Z, 4v69:AZ, 4v6k:BC, 4v6l:AC, 5wdt:z, 6wd2:8, 6wd3:8, 6wd5:8, 6wd6:8, 6wd8:8, 5we4:z, 5we6:z, 5wf0:z, 5wfk:z, 5wfs:z
63 5fg3:A 598 135 0.0736 0.0635 0.2815 3.91e-08 5yt0:A
64 6mij:A 388 126 0.0698 0.0928 0.2857 4.31e-08
65 5lzb:z 614 133 0.0756 0.0635 0.2932 7.41e-08 5lzc:z, 5lzd:z, 2pjp:A
66 4iw3:B 380 133 0.0775 0.1053 0.3008 9.58e-08 4iw3:K, 4j0q:A, 4j0q:B, 4j0q:C, 4j0q:D, 4j0q:E
67 6ra9:B 458 148 0.0775 0.0873 0.2703 9.67e-08 8b6z:A, 4c0s:A, 4c0s:B, 8g5z:EF, 8g60:EF, 8g6j:EF, 5lzs:jj, 6ra9:A, 6zmo:CD
68 4ac9:C 471 132 0.0659 0.0722 0.2576 1.20e-07 4ac9:A, 4ac9:B, 4aca:B, 4aca:C, 4acb:A, 4acb:B, 4acb:C
69 5w75:C 387 131 0.0756 0.1008 0.2977 1.24e-07 5w75:B, 5w75:D, 5w75:A
70 1skq:A 416 141 0.0814 0.1010 0.2979 1.42e-07 1jny:A, 1jny:B, 1skq:B
71 3jb9:B 904 141 0.0678 0.0387 0.2482 1.49e-07
72 7syv:x 627 148 0.0736 0.0606 0.2568 1.51e-07 8pj3:0, 8pj4:0, 8pj5:0, 7syw:x, 7syx:x, 7tql:1, 4ujc:AB, 4ujd:BB
73 7yyp:A 597 135 0.0698 0.0603 0.2667 1.51e-07 7yzn:A, 7zag:7, 7zah:7, 7zki:7
74 7unv:x 593 170 0.0872 0.0759 0.2647 2.15e-07 7unq:x, 7unr:x, 7unt:x, 7unu:x, 7unw:x
75 8rdw:H 386 97 0.0562 0.0751 0.2990 2.31e-07 8rd8:H
76 5m1j:A6 539 163 0.0736 0.0705 0.2331 2.35e-07
77 6uz7:1 600 135 0.0756 0.0650 0.2889 2.55e-07 4v8y:CP
78 4v8z:CV 568 140 0.0795 0.0722 0.2929 4.14e-07
79 6woo:1 600 140 0.0795 0.0683 0.2929 4.37e-07 4ncf:A, 4ncf:B, 3wbk:A
80 5o8w:A 449 145 0.0775 0.0891 0.2759 4.76e-07 2b7b:A, 9bdp:EF1A, 1g7c:A, 1ije:A, 1ijf:A
81 1d2e:A 397 131 0.0756 0.0982 0.2977 5.30e-07 7a5g:Z, 1d2e:B, 1d2e:C, 1d2e:D, 7o9k:t
82 6j6g:C 920 134 0.0756 0.0424 0.2910 5.75e-07 7b9v:C, 6bk8:B, 7dco:C, 5gm6:C, 5gmk:C, 6j6h:C, 6j6n:C, 6j6q:C, 3jcm:H, 6teo:A, 6teo:C, 5wsg:C, 5y88:C, 5ylz:C, 5zwm:C, 5zwo:C
83 5lj3:C 882 134 0.0756 0.0442 0.2910 6.14e-07 6exn:C, 5gam:C, 5gan:C, 5lj5:C, 5lqw:B, 5mps:C, 5mq0:C, 5nrl:C
84 7pua:IA 704 143 0.0756 0.0554 0.2727 3.13e-06 7pub:IA
85 3wy9:A 416 132 0.0756 0.0938 0.2955 3.76e-06 3wy9:B, 3wya:A
86 8ro0:C 898 138 0.0698 0.0401 0.2609 4.21e-06 8ro1:C
87 4zu9:A 582 208 0.0930 0.0825 0.2308 4.66e-06
88 8v9l:x 387 132 0.0678 0.0904 0.2652 1.63e-05 7vok:A, 7vok:B, 7vok:C, 7vok:D
89 4v5p:AZ 385 128 0.0659 0.0883 0.2656 5.17e-05 1ha3:B, 4v5g:AZ, 4v5g:CZ, 4v5p:CZ, 4v5q:AZ, 4v5q:CZ, 4v5r:AZ, 4v5r:CZ, 4v5s:AZ, 4v5s:CZ, 4v68:AZ
90 3izy:P 537 147 0.0736 0.0708 0.2585 9.99e-05
91 5lzt:jj 428 144 0.0678 0.0818 0.2431 1.36e-04 4d61:i, 5hxb:X, 5hxb:A, 7nwh:jj, 6xk9:X, 6xk9:A
92 1zun:B 394 131 0.0620 0.0812 0.2443 8.32e-04
93 4crn:P 430 113 0.0562 0.0674 0.2566 0.001
94 6gaw:BC 571 147 0.0717 0.0648 0.2517 0.001 6gaz:BC, 6gb2:BC, 7po2:7, 8qrn:7, 6rw5:7
95 5lmv:a 502 140 0.0717 0.0737 0.2643 0.003
96 9ax8:z 509 150 0.0795 0.0806 0.2733 0.006 3jcj:f, 3jcn:b, 5me0:W, 5me1:W, 6o7k:f, 6o9k:z
97 3avt:A 1203 76 0.0426 0.0183 0.2895 0.013 7abz:6, 5afi:z, 3agp:A, 3agq:A, 3avu:A, 3avv:A, 3avw:A, 3avx:A, 3avy:A, 7bbn:A, 7bbn:B, 2bvn:A, 2bvn:B, 1efm:A, 1etu:A, 4fwt:A, 2hcj:A, 2hcj:B, 2hdn:A, 2hdn:B, 2hdn:C, 2hdn:D, 2hdn:E, 2hdn:F, 2hdn:G, 2hdn:H, 2hdn:I, 2hdn:J, 2hdn:K, 2hdn:L, 5i4r:C, 5i4r:D, 5i4r:G, 5i4r:H, 3mmp:G, 5opd:A, 5opd:B, 4pc2:A, 4pc2:B, 4pc3:A, 4pc3:B, 4pc6:A, 4pc6:B, 4pc7:A, 3u6b:B, 3u6b:A, 3vnu:A, 3vnv:A, 6wd4:8, 6wd7:8, 6wd9:8, 6wda:8
98 5izm:B 495 62 0.0310 0.0323 0.2581 0.030 5izk:A, 5izm:A
99 7zjw:E 519 62 0.0310 0.0308 0.2581 0.031 5izl:A, 5izl:B
100 8tzf:A 1589 149 0.0736 0.0239 0.2550 0.17
101 7vmx:B 359 60 0.0349 0.0501 0.3000 0.18
102 2wib:A 261 98 0.0543 0.1073 0.2857 0.41 2wib:B, 2wic:A
103 3i8x:B 261 98 0.0543 0.1073 0.2857 0.43 3hyt:A, 3hyt:B, 3hyt:C, 3i8x:A, 3i8x:C, 4r98:A, 4r98:B
104 6yxx:EA 532 62 0.0329 0.0320 0.2742 0.48 7aoi:XL, 6yxy:EA
105 3ieu:A 293 166 0.0930 0.1638 0.2892 0.49 3ieu:B
106 7am2:BU 463 62 0.0349 0.0389 0.2903 0.92
107 3j8g:X 418 135 0.0659 0.0813 0.2519 0.92
108 5dn8:A 405 137 0.0640 0.0815 0.2409 0.98
109 3rrv:B 254 55 0.0291 0.0591 0.2727 1.1 3rrv:A, 3rrv:C, 3rrv:D, 3rrv:E, 3rrv:F
110 4kjz:C 458 140 0.0678 0.0764 0.2500 1.3 4b43:A, 4b44:A, 4b47:A, 4b48:A, 4kjz:A
111 6k8k:G 490 55 0.0349 0.0367 0.3273 2.0 6k8i:A, 6k8i:B, 6k8k:A, 6k8k:B, 6k8k:D, 6m79:A, 6m79:B, 6m79:C, 6m79:D, 7x0x:D, 7x0x:B, 7x0x:C, 7x0x:A, 7x0y:B, 7x0y:D, 7x0y:C, 7x0y:A, 6x24:A, 6x24:B, 6x24:C, 6x24:D
112 5izk:B 451 92 0.0388 0.0443 0.2174 2.6
113 8fo9:F 2289 152 0.0736 0.0166 0.2500 2.8 9c61:A, 9c61:B, 8fo2:E, 8fo7:C, 8fo8:C, 8fo8:E, 8fo9:E, 7lht:A, 7lht:B, 7lhw:A, 7li3:A, 7li4:A, 6oje:A, 6oje:B, 6ojf:A, 6ojf:B, 7thy:A, 7thz:A, 6xaf:A, 6xaf:B, 2zej:B
114 3iev:A 302 146 0.0640 0.1093 0.2260 3.7 7c1o:A, 3r9w:A, 3r9x:A
115 8u8b:A 1712 150 0.0678 0.0204 0.2333 7.4 8u7l:B, 8u7l:A, 8u8a:B, 8u8a:C, 8u8b:B, 2zej:A
116 4hi7:A 220 29 0.0174 0.0409 0.3103 8.2 4hi7:B
117 1xzq:A 449 141 0.0620 0.0713 0.2270 8.4 1xzq:B
118 7p18:A 558 37 0.0252 0.0233 0.3514 8.9 7p18:B
119 8fo9:A 1173 137 0.0659 0.0290 0.2482 8.9 8fo9:C
120 8u7h:C 1111 137 0.0659 0.0306 0.2482 9.1

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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