Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
MSLRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGPAHE
SSVLKAIKAQKYVFCEVPLATTAEGCMRIVEEEIKVGKRLVQVGFMRRYDSGYVQLKEALDNHVIGEPLMIHCAHRNPTV
GDNYTTDMAVVDTLVHEIDVLHWLVNDDYESVQVIYPKKSKNALPHLKDPQIVVIETKGGIVINAEIYVNCKYGYDIQCE
IVGEDGIIKLPEPSSISLRKEGRFSTDILMDWQRRFVAAYDVEIQDFIDSIQKKGEVSGPTAWDGYIAAVTTDACVKAQE
SGQKEKVELKEKPEFYQ

The query sequence (length=337) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 4l8v:A 337 337 0.9911 0.9911 0.9911 0.0 4l8v:B, 4l8v:C, 4l8v:D, 3nt2:A, 3nt2:B, 3nt4:A, 3nt4:B, 3nt5:A, 3nt5:B, 3ntq:A, 3ntq:B, 3ntr:A, 3ntr:B
2 3ec7:A 336 337 0.4955 0.4970 0.4955 6.84e-129 3ec7:B, 3ec7:C, 3ec7:D, 3ec7:E, 3ec7:F, 3ec7:G, 3ec7:H
3 4min:A 339 339 0.4777 0.4749 0.4749 2.24e-115 4min:B, 4min:C, 4min:D, 4mio:A, 4mio:B, 4mio:C, 4mio:D, 4miy:A, 4miy:B, 4miy:C, 4miy:D, 4mjl:A, 4mjl:B, 4mjl:C, 4mjl:D
4 3cea:A 342 349 0.2730 0.2690 0.2636 1.79e-28 3cea:B, 3cea:C, 3cea:D
5 4n54:A 340 349 0.2611 0.2588 0.2521 3.81e-26 4n54:B, 4n54:C, 4n54:D
6 6jw7:A 342 264 0.1929 0.1901 0.2462 3.21e-18 6jw6:A, 6jw6:B, 6jw7:B, 6jw8:A, 6jw8:B
7 3e18:A 348 274 0.2344 0.2270 0.2883 5.71e-16 3e18:B
8 4koa:A 333 342 0.2374 0.2402 0.2339 1.60e-14
9 2glx:A 332 347 0.2463 0.2500 0.2392 1.92e-14 2glx:B, 2glx:C, 2glx:D, 2glx:E, 2glx:F
10 6z3c:AAA 379 195 0.1662 0.1478 0.2872 2.32e-11 6z3b:A, 6z3b:B, 6z3c:BBB
11 3q2k:C 347 202 0.1632 0.1585 0.2723 1.50e-10 3q2k:A, 3q2k:B, 3q2k:D, 3q2k:F, 3q2k:G, 3q2k:H, 3q2k:I, 3q2k:J, 3q2k:M, 3q2k:N, 3q2k:O
12 3q2k:K 322 202 0.1632 0.1708 0.2723 1.62e-10 3q2k:E, 3q2k:L, 3q2k:P
13 6o15:A 355 151 0.1335 0.1268 0.2980 4.27e-10 6o15:B
14 1h6d:A 383 125 0.1098 0.0966 0.2960 6.02e-10 1evj:A, 1evj:B, 1evj:C, 1evj:D, 1h6a:A, 1h6a:B, 1h6b:A, 1h6b:B, 1h6c:A, 1h6c:B, 1h6d:C, 1h6d:B, 1h6d:D, 1h6d:E, 1h6d:G, 1h6d:F, 1h6d:H, 1h6d:I, 1h6d:K, 1h6d:J, 1h6d:L, 1ofg:A, 1ofg:D, 1ofg:B, 1ofg:C, 1ofg:E, 1ofg:F, 1ryd:A, 1ryd:B, 1rye:A, 1rye:D, 1rye:B, 1rye:C
15 7xre:C 363 188 0.1484 0.1377 0.2660 8.21e-10 7xr9:A, 7xr9:B, 7xr9:C, 7xr9:D, 7xr9:E, 7xr9:F, 7xre:A, 7xre:B, 7xre:D, 7xre:E, 7xre:F
16 3q2i:A 345 296 0.1988 0.1942 0.2264 9.01e-09
17 7x2y:A 342 201 0.1365 0.1345 0.2289 7.80e-08 7x1x:A, 7x1x:B, 7x2y:B
18 9azo:A 315 132 0.1039 0.1111 0.2652 1.07e-07 9azo:B, 9azo:C, 9azo:D, 9azo:E, 9azo:F
19 3rc1:A 325 256 0.1899 0.1969 0.2500 2.70e-07 3rbv:A, 3rc2:A, 3rc7:A, 3rc9:A, 3rcb:A
20 8qc6:A 366 199 0.1484 0.1366 0.2513 2.81e-07 8qc3:A, 8qc3:B, 8qc5:A, 8qc5:B, 8qc6:B
21 1zh8:A 325 151 0.1187 0.1231 0.2649 4.36e-07 1zh8:B
22 5a03:C 336 229 0.1335 0.1339 0.1965 2.93e-06 5a02:A, 5a02:B, 5a02:C, 5a02:D, 5a02:E, 5a02:F, 5a03:A, 5a03:B, 5a03:D, 5a03:E, 5a03:F, 5a04:A, 5a04:B, 5a04:C, 5a04:D, 5a04:E, 5a04:F, 5a05:A, 5a05:C, 5a05:D, 5a05:E, 5a05:B, 5a05:F, 5a06:A, 5a06:B, 5a06:C, 5a06:D, 5a06:E, 5a06:F
23 2ixa:A 426 130 0.1306 0.1033 0.3385 1.43e-05 2ixb:A
24 2o4u:X 331 147 0.1039 0.1057 0.2381 4.48e-05 2poq:X
25 6nor:A 349 213 0.1395 0.1347 0.2207 6.33e-05 6nor:B, 6nor:C, 6nor:D, 6nor:E, 6nor:F
26 6t2b:B 439 117 0.0861 0.0661 0.2479 2.40e-04 6t2b:A, 6t2b:C, 6t2b:D
27 8qc8:D 339 230 0.1602 0.1593 0.2348 2.60e-04
28 3m2t:A 342 186 0.1395 0.1374 0.2527 2.74e-04 3m2t:B
29 8qc8:B 367 198 0.1424 0.1308 0.2424 3.61e-04 8qc2:A, 8qc2:B, 8qc2:C, 8qc2:D, 8qc8:C, 8qc8:A
30 4nhe:B 326 263 0.1691 0.1748 0.2167 0.005 4nhe:A, 4nhe:C
31 8tdf:A 452 149 0.1217 0.0907 0.2752 0.007 8tdf:B, 8tdf:C, 8tdf:D, 8tdh:B, 8tdh:C, 8tdh:D, 8tdh:A
32 5uhw:A 342 268 0.1691 0.1667 0.2127 0.017 5uhw:B, 5uhz:A, 5uhz:B, 5ui9:A, 5ui9:B, 5uia:A, 5uia:B, 5uib:A, 5uib:B
33 3e1k:A 395 216 0.1217 0.1038 0.1898 0.017 3e1k:C, 3e1k:E, 3e1k:G, 3e1k:I, 3e1k:K, 3e1k:M, 3e1k:O
34 8hmn:D 340 72 0.0742 0.0735 0.3472 0.058 8hmn:A, 8hmn:B, 8hmn:C, 6iqm:A, 6iqm:B, 6iqm:C, 6iqm:D
35 3o9z:A 310 128 0.0950 0.1032 0.2500 0.069 3o9z:B, 3o9z:C, 3o9z:D, 3oa0:A, 3oa0:B, 3oa0:C, 3oa0:D
36 6a3j:C 378 388 0.2671 0.2381 0.2320 0.16 6a3g:A, 6a3g:B, 6a3g:C, 6a3g:D, 6a3i:A, 6a3i:B, 6a3i:C, 6a3i:D, 6a3j:A, 6a3j:B, 6a3j:D
37 6ktk:C 368 108 0.0772 0.0707 0.2407 0.24 6ktk:A, 6ktk:B, 6ktk:D, 6ktl:A, 6ktl:B, 6ktl:C, 6ktl:D, 5ya8:A, 5ya8:B, 5ya8:C, 5ya8:D, 5yap:A, 5yap:B, 5yap:C, 5yap:D, 5yaq:A, 5yaq:B, 5yaq:C, 5yaq:D
38 7bvj:A 313 106 0.0801 0.0863 0.2547 0.46 7bvj:B, 7bvj:C, 7bvj:D, 7bvk:A, 7bvk:B
39 7www:A 336 70 0.0682 0.0685 0.3286 0.68
40 5b3u:B 317 102 0.0712 0.0757 0.2353 0.71 5b3v:B, 5b3v:A, 5b3v:C, 5b3v:D
41 5ie2:A 506 119 0.0979 0.0652 0.2773 0.89 5ie2:B, 5ie3:A, 5ie3:B
42 7d5m:A 389 182 0.1246 0.1080 0.2308 2.8 7d5n:A, 7d5n:B
43 7v94:A 1076 47 0.0504 0.0158 0.3617 3.6 7v93:A
44 8hr6:A 359 32 0.0445 0.0418 0.4688 4.0 8hr6:B
45 1g3i:A 326 110 0.0979 0.1012 0.3000 6.3 1g3i:B, 1g3i:C, 1g3i:D, 1g3i:E, 1g3i:F, 1g3i:S, 1g3i:U, 1g3i:V, 1g3i:W, 1g3i:X, 1kyi:A, 1kyi:B, 1kyi:C, 1kyi:D, 1kyi:E, 1kyi:F, 1kyi:S, 1kyi:T, 1kyi:U, 1kyi:V, 1kyi:W, 1kyi:X
46 2wl9:A 300 64 0.0475 0.0533 0.2500 8.0 2wl3:A, 2wl3:B, 2wl3:C, 2wl3:D, 2wl9:B, 2wl9:C, 2wl9:D
47 2olg:A 276 35 0.0386 0.0471 0.3714 8.1
48 8h2a:A 366 125 0.1098 0.1011 0.2960 9.5 8h2a:B, 8h2a:C, 8h2a:D, 8h2a:E, 8h2a:F, 8h2a:G, 8h2a:H

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218