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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
MRVPYSYLERQFADIEPYLNDLREFIKTADFTLGAELEKFEKRFAALHNAPHAIGVGTGTDALAMSFKMLNIGAGDEVIT
CANTFIASVGAIVQAGATPVLVDSENGYVIDPEKIEAAITDKTKAIMPVHYTGNIADMPALAKIAKKHNLHIVEDACQTI
LGRINDKFVGSWGQFACFSLHPLKNLNVWSDAGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRL
MNQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHIYVLRVKYRDQLFQYLKDNGIEVKIHYPIAMHLQPAA
KSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREFYLEKHYN

The query sequence (length=371) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 3uwc:A 371 371 1.0000 1.0000 1.0000 0.0
2 3frk:A 365 366 0.3801 0.3863 0.3852 2.25e-78 3frk:B
3 2oga:A 371 365 0.3558 0.3558 0.3616 3.00e-76 2oga:B, 2oga:C, 2oga:D
4 7n63:A 362 344 0.3477 0.3564 0.3750 7.01e-69
5 5u23:D 366 337 0.3369 0.3415 0.3709 3.42e-67 5u21:A, 5u21:B, 5u21:C, 5u21:D, 5u23:C, 5u23:A, 5u23:B, 5u24:A, 5u24:B, 5u24:C, 5u24:D
6 3nu7:B 359 355 0.3235 0.3343 0.3380 2.90e-57 3nu7:A, 3nub:A, 3nub:B, 3nys:A, 3nyt:A
7 4k2m:A 442 373 0.3261 0.2738 0.3244 7.60e-55 4k2i:A, 4k2i:B, 4k2m:B
8 8e77:A 358 342 0.2938 0.3045 0.3187 1.30e-54
9 7kz3:D 439 369 0.3342 0.2825 0.3360 1.30e-52 7kz5:A, 7kz5:B, 7kz5:C, 7kz5:D, 7kz6:A, 7kz6:B, 7kz6:C, 7kz6:D, 7kzd:A, 7kzd:B, 7kzd:C, 7kzd:D, 7kzd:E, 7kzd:H, 7kzd:F, 7kzd:G
10 4qgr:A 376 372 0.3315 0.3271 0.3306 1.49e-52 4qgr:B
11 3bn1:A 368 344 0.3315 0.3342 0.3576 1.62e-51 3bn1:B, 3dr4:A, 3dr4:B, 3dr4:C, 3dr4:D, 3dr7:A, 3dr7:B, 3dr7:C, 3dr7:D
12 8snj:A 370 358 0.2830 0.2838 0.2933 1.21e-48 8sng:A, 8sng:B, 8snj:B, 8snj:C, 8snj:D, 8snj:E, 8snj:F, 8su6:A, 8su6:B
13 1mdx:A 366 360 0.2830 0.2869 0.2917 2.67e-46 1mdo:A, 1mdz:A, 4oca:A
14 7l7x:AAA 395 373 0.2992 0.2810 0.2976 3.63e-46 7l7x:BBB
15 8vr5:B 376 364 0.2857 0.2819 0.2912 1.66e-41 8vr3:B, 8vr5:A, 8vr5:C, 8vr5:D
16 6ewq:C 402 400 0.2992 0.2761 0.2775 5.24e-38 6ewq:A, 6ewq:B, 6ewq:D, 6ewr:A, 6ewr:B, 6ewr:C, 6ewr:D
17 4zah:A 370 294 0.2507 0.2514 0.3163 3.39e-36 4zah:B, 4zah:C, 4zah:D, 4zah:E, 4zah:F, 4zah:G, 4zah:H
18 5k8b:A 394 275 0.2426 0.2284 0.3273 5.94e-36 5k8b:B, 5k8b:C, 5k8b:D
19 2fni:A 374 371 0.2561 0.2540 0.2561 3.65e-34 2fni:B, 2fnu:A, 2fnu:B
20 9bgr:B 371 358 0.2695 0.2695 0.2793 6.21e-33 9bgr:A
21 3bb8:A 420 364 0.2372 0.2095 0.2418 3.86e-32 3bb8:B
22 5w71:A 413 227 0.2075 0.1864 0.3392 9.07e-32 2c7t:A, 2c81:A, 5w71:B
23 5uid:A 367 357 0.2507 0.2534 0.2605 5.46e-30 5uid:D
24 8gyj:B 428 267 0.2237 0.1939 0.3109 3.86e-29 8gyi:A, 8gyi:B, 8gyj:A
25 5w70:A 414 208 0.1725 0.1546 0.3077 1.75e-25 5w70:B
26 2po3:A 393 341 0.2318 0.2188 0.2522 2.12e-24 2po3:B
27 4ztc:A 385 246 0.1833 0.1766 0.2764 4.54e-24 1o61:A, 1o61:B, 1o69:A, 1o69:B
28 1b9h:A 384 288 0.2507 0.2422 0.3229 4.03e-23 1b9i:A
29 4xau:C 374 368 0.2399 0.2380 0.2418 2.70e-21
30 2gms:A 390 193 0.1509 0.1436 0.2902 8.49e-16 3b8x:A, 3b8x:B, 2gms:B, 2gmu:A, 2gmu:B, 3gr9:A, 3gr9:B, 3gr9:C, 3gr9:D, 3gr9:E, 3gr9:F, 3gr9:G, 3gr9:H, 2r0t:A, 2r0t:B
31 4zas:A 369 347 0.1995 0.2005 0.2133 7.69e-15 4zas:B, 4zas:D, 4zas:E, 4zas:F
32 1b5o:A 382 128 0.1159 0.1126 0.3359 1.58e-06 1b5o:B, 1b5p:A, 1b5p:B, 1bjw:A, 1bjw:B, 5bj3:A, 5bj3:B, 5bj3:C, 5bj3:D, 5bj4:A, 5bj4:B, 1bkg:A, 1bkg:B, 1bkg:C, 1bkg:D, 1gc3:A, 1gc3:B, 1gc3:C, 1gc3:D, 1gc3:E, 1gc3:F, 1gc3:G, 1gc3:H, 1gc4:A, 1gc4:B, 1gc4:C, 1gc4:D, 1gck:A, 1gck:B
33 1v2e:A 368 115 0.0916 0.0924 0.2957 4.23e-06 1v2d:A, 1v2e:B, 1v2f:A, 1v2f:B
34 7kb1:A 428 132 0.1132 0.0981 0.3182 4.89e-06 7kb1:B, 7kb1:C, 7kb1:D
35 1pg8:A 398 122 0.0943 0.0879 0.2869 1.25e-04 7f1u:A, 7f1u:B, 7f1u:C, 7f1u:D, 7f1v:A, 7f1v:B, 7f1v:C, 7f1v:D, 1pg8:C, 1pg8:B, 1pg8:D, 3vk3:A, 3vk3:B, 3vk3:C, 3vk3:D, 5x2w:A, 5x2w:B, 5x2w:C, 5x2w:D, 5x2x:A, 5x2x:B, 5x2x:C, 5x2x:D, 5x2z:A, 5x2z:B, 5x2z:C, 5x2z:D, 5x30:A, 5x30:B, 5x30:C, 5x30:D
36 1o4s:B 384 114 0.0836 0.0807 0.2719 1.55e-04 1o4s:A
37 8j6n:A 390 190 0.1482 0.1410 0.2895 2.39e-04 8j6n:D, 8j6n:B, 8j6n:C, 8j6n:E, 8j6n:H, 8j6n:J, 8j6n:K, 8j6n:F, 8j6n:G, 8j6n:I, 8j6n:L
38 5wml:A 404 106 0.0782 0.0718 0.2736 4.98e-04 6f5v:A, 6f5v:B, 6f5v:C, 6f5v:D, 5wmh:A, 5wmh:B, 5wmh:C, 5wmh:D, 5wmh:E, 5wmh:F, 5wmi:A, 5wml:B
39 1gd9:A 388 89 0.0647 0.0619 0.2697 0.001 1dju:A, 1dju:B, 1gd9:B, 1gde:A, 1gde:B
40 6f77:A 399 89 0.0755 0.0702 0.3146 0.001 6f77:C, 6f77:D, 6f77:E, 6f77:F
41 1j32:A 388 92 0.0782 0.0747 0.3152 0.004 1j32:B
42 8wko:A 425 124 0.0997 0.0871 0.2984 0.005 8wko:B, 8wkr:A, 8wkr:B, 8wkr:C, 8wkr:D
43 1t3i:A 406 104 0.0755 0.0690 0.2692 0.006 1t3i:B
44 2dr1:A 381 128 0.0889 0.0866 0.2578 0.007 2dr1:B
45 3fvs:B 419 112 0.0836 0.0740 0.2768 0.007 3fvu:A, 3fvu:B, 1w7l:A, 1w7m:A, 1w7n:A, 4wlj:A, 4wlj:B
46 1xi9:C 393 130 0.0943 0.0891 0.2692 0.008 1xi9:A, 1xi9:B, 1xi9:D
47 6f35:A 400 103 0.0782 0.0725 0.2816 0.010 6f35:B
48 4r2n:A 353 107 0.0782 0.0822 0.2710 0.014 4r2n:C, 4r2n:B, 4r2n:D, 4r5z:A, 4r5z:B, 4r5z:C, 4r5z:D
49 6ldo:A 381 139 0.1051 0.1024 0.2806 0.014 6ldo:B, 6ldo:C, 6ldo:D, 6ldo:E, 6ldo:F, 6le4:A, 6le4:B, 6le4:C, 6le4:D, 6le4:E, 6le4:F
50 2zc0:A 405 138 0.1240 0.1136 0.3333 0.019 2zc0:B, 2zc0:C, 2zc0:D
51 6cja:A 381 162 0.1213 0.1181 0.2778 0.022 6cja:B, 6cja:C, 6cja:D
52 8ffu:A 360 114 0.0755 0.0778 0.2456 0.025 8fft:A, 8fft:B, 8fft:C, 8fft:D, 8ffu:B, 8ffu:C, 8ffu:D
53 3e2y:A 410 99 0.0674 0.0610 0.2525 0.028 3e2y:B, 3e2z:A, 3e2z:B, 5vep:A, 5veq:A, 5veq:B, 5ver:A, 5ver:B
54 7cep:A 414 113 0.0836 0.0749 0.2743 0.034 7ceo:A, 7cer:A, 7ces:A, 7e6b:A, 7e6c:A, 7e6e:A, 7e6f:A, 5j8q:A, 6kfz:A, 7xej:A, 7xek:A, 7xen:A, 7xep:A, 7xet:A, 5xt5:A, 5xt5:B, 5xt6:A, 5xt6:B, 5zsk:A, 5zso:A
55 2ctz:A 421 140 0.0970 0.0855 0.2571 0.10 2ctz:B
56 8wkj:A 391 87 0.0674 0.0639 0.2874 0.17
57 4iyo:D 384 156 0.1024 0.0990 0.2436 0.18 4ixs:B, 4ixz:A, 4iy7:A, 4iy7:B, 4iy7:C, 4iy7:D, 4iyo:A, 4iyo:B, 4iyo:C
58 2r5c:B 419 100 0.0701 0.0621 0.2600 0.54 2r5e:A, 2r5e:B, 1yiy:A, 1yiy:B
59 7tlm:A 415 67 0.0566 0.0506 0.3134 0.65 7tlp:B, 7tlp:C, 7tlp:D, 7tlp:E, 7tlp:F, 7tlq:A, 7tlq:B, 7tlr:A, 7tlr:B
60 7mcb:H 380 211 0.1375 0.1342 0.2417 0.67 7mcl:H, 7mcn:H, 7mcp:A, 7mcp:H, 7mcq:A, 7mcq:H, 7mct:H, 7mcu:H, 7mcy:H, 7md0:H, 7md6:H, 7md8:H, 7mda:H, 7mdb:H
61 7tlp:A 391 67 0.0566 0.0537 0.3134 0.68
62 8erb:K 429 145 0.1024 0.0886 0.2621 0.72 8erb:A, 8erb:C, 8erb:B, 8erb:D, 8erb:G, 8erb:H, 8erb:F, 8erb:P, 8erb:I, 8erb:J, 8erb:M, 8erb:E, 8erb:Q, 8erb:N, 8erb:L, 8erj:A, 8erj:B, 8erj:C, 8erj:D, 8erj:E, 8erj:F, 8erj:H, 8erj:G
63 3aej:A 387 131 0.0863 0.0827 0.2443 0.81 3aej:D, 3aej:B, 3aej:C, 3ael:A, 3ael:D, 3ael:B, 3ael:C, 3aem:A, 3aem:D, 3aem:B, 3aem:C, 3aen:A, 3aen:D, 3aen:B, 3aen:C, 3aeo:A, 3aeo:D, 3aeo:B, 3aeo:C, 3aep:A, 3aep:D, 3aep:B, 3aep:C
64 5wm3:A 537 45 0.0458 0.0317 0.3778 1.8 5wm2:A, 5wm4:A, 5wm5:A, 5wm6:A, 5wm7:A
65 8e0c:A 185 78 0.0512 0.1027 0.2436 2.2 8e0a:B, 8e0b:B, 8e0d:A, 1f6b:A, 1f6b:B, 2fa9:A, 2fa9:B, 2fmx:A, 2fmx:B
66 7sbh:A 208 32 0.0377 0.0673 0.4375 2.2
67 8bj3:A 360 107 0.0782 0.0806 0.2710 2.4 8bj3:B
68 6l1l:B 393 57 0.0593 0.0560 0.3860 3.3 6l1l:A, 6l1n:A, 6l1n:B, 6l1o:B, 6l1o:A
69 8tn3:A 388 75 0.0539 0.0515 0.2667 3.4 8tn3:B, 7uky:A, 7uky:B
70 7l5a:A 477 75 0.0593 0.0461 0.2933 3.8
71 3n75:A 711 300 0.1806 0.0942 0.2233 4.7 3n75:D, 3n75:B, 3n75:E, 3n75:C, 6q7l:A, 6q7l:F, 6q7l:B, 6q7l:C, 6q7l:D, 6q7l:J, 6q7l:E, 6q7l:H, 6q7l:G, 6q7l:I, 6q7l:K, 6q7l:R, 6q7l:L, 6q7l:Q, 6q7l:M, 6q7l:P, 6q7l:N, 6q7l:T, 6q7l:O, 6q7l:S, 6q7m:A, 6q7m:F, 6q7m:B, 6q7m:C, 6q7m:D, 6q7m:J, 6q7m:E, 6q7m:H, 6q7m:G, 6q7m:I, 6q7m:K, 6q7m:R, 6q7m:L, 6q7m:Q, 6q7m:M, 6q7m:P, 6q7m:N, 6q7m:O, 6q7m:S, 6q7m:T
72 1aor:A 605 92 0.0566 0.0347 0.2283 6.5 1aor:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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