BioLiP

>protein
MRNKPGKATGKGKPVNNKWLNNAGKDLGSPVPDRIANKLRDKEFKSFDDFRKKFWEEVSKDPELSKQFSRNNNDRMKVGK
APKTRTQDVSGKRTSFELHHEKPISQNGGVYDMDNISVVTPKRHIDIHRGK

The query sequence (length=131) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	3fbd:A	132	130	0.9847	0.9773	0.9923	9.80e-93	7cei:B, 3fbd:D, 3gjn:B, 3gjn:C, 3gkl:A, 2ivh:A, 2jaz:B, 2jaz:D, 2jb0:B, 2jbg:B, 2jbg:D, 1m08:A, 1m08:B, 1mz8:B, 1mz8:D, 1pt3:A, 1pt3:B, 3zfk:A, 3zfk:B, 1zns:A, 1znv:B, 1znv:D
2	3u43:B	132	130	0.7405	0.7348	0.7462	3.51e-68
3	1fsj:B	134	130	0.6947	0.6791	0.7000	6.60e-62	1fr2:B, 1fsj:C, 1fsj:D, 1fsj:E, 2gyk:B, 2gyk:F, 2gze:B, 2gzf:B, 2gzg:B, 2gzi:B, 2gzj:B, 2gzj:F, 1v13:A, 1v13:B, 1v14:A, 1v14:B, 1v14:C, 1v14:D, 1v15:B, 1v15:D, 1v15:C
4	4qko:D	133	129	0.4962	0.4887	0.5039	1.57e-44	4qko:B, 4qko:F, 4qko:H
5	1v15:A	106	127	0.5420	0.6698	0.5591	8.96e-40
6	8qlg:A	624	22	0.0916	0.0192	0.5455	0.37	8qlg:B
7	8xop:A	178	49	0.1298	0.0955	0.3469	0.62	8xop:B, 8xop:C, 8xop:D, 8xop:E, 8xop:F, 8xop:G
8	3i58:A	328	19	0.0611	0.0244	0.4211	6.4	3i53:A, 3i53:B, 3i58:B, 3i5u:A, 3i5u:B, 3i64:A, 3i64:B
9	7mq8:SP	1993	55	0.1145	0.0075	0.2727	8.3	7mq9:SP
10	7mqa:SP	2485	55	0.1145	0.0060	0.2727	8.4

[Back]