BioLiP

>protein
MRKITVLSFITLDGVMQAPGGPEEDTSGGFKYGGWTAPYEDEVSGKIMEKQMKPADYLLGRKTFEIFASYWPEHADFWPG
INDGTKYVMSKTVKKSDWKNSVFLESLADIKKLKNSEGSDIQVWGSGELIQLLFKNDLVDELWLKIFPVTLNTGKRLFGD
GTIPAAFTLIESSVTPSGVIIANYKRAGEVKTGTV

The query sequence (length=195) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	8jsv:I	203	195	1.0000	0.9606	1.0000	3.02e-143	8jsv:A, 8jsv:B, 8jsv:C, 8jsv:D, 8jsv:E, 8jsv:F, 8jsv:G, 8jsv:H, 8jsv:J, 8jsy:A, 8jsy:B, 8jsy:C, 8jsy:D, 8jsy:E, 8jsy:F, 8jsy:G, 8jsy:H, 8jsy:I, 8jsy:J, 8jt0:A, 8jt0:B, 8jt0:C, 8jt0:D, 8jt0:E, 8jt0:F, 8jt0:G, 8jt0:H, 8jt0:I, 8jt0:J
2	3kgy:A	218	136	0.1846	0.1651	0.2647	7.73e-05	3kgy:B
3	2xw7:A	175	41	0.0718	0.0800	0.3415	0.19	2xw7:B
4	6vfy:F	304	33	0.0667	0.0428	0.3939	1.4	2v1o:A, 2v1o:D, 2v1o:B, 2v1o:C, 2v1o:E, 2v1o:F, 6vfy:D, 6vfy:E, 4zv3:A, 4zv3:B, 4zv3:C
5	3tqw:A	235	18	0.0513	0.0426	0.5556	2.4	3tqw:B
6	7wjn:A	808	48	0.0872	0.0210	0.3542	3.4	7wjn:B, 7wjo:A, 7wjo:B, 7x05:A, 7x05:B, 7x06:A, 7x06:B
7	5tsq:A	312	58	0.0769	0.0481	0.2586	3.5
8	6joo:A	834	66	0.1026	0.0240	0.3030	4.2
9	2wwb:A	476	50	0.0821	0.0336	0.3200	4.6	8b5l:s, 8b6c:K, 4cg6:A, 8dnx:A, 8dny:A, 8dnz:A, 8do0:A, 8do1:A, 8do2:A, 8do3:A, 8rjb:1, 8rjc:1, 8rjd:1, 7tm3:1, 7tut:1
10	8b6l:A	425	50	0.0821	0.0376	0.3200	5.2
11	6ftg:x	426	50	0.0821	0.0376	0.3200	5.3	8btk:SX, 6fti:x, 6ftj:x, 3j7q:1, 3j7r:1, 3jc2:1, 8oj0:1, 8oj8:1, 6r7q:XX, 6w6l:1, 7zl3:A
12	8bf9:C	385	48	0.0821	0.0416	0.3333	7.2	6z3t:A
13	1e3p:A	645	24	0.0462	0.0140	0.3750	7.4

[Back]