BioLiP

>protein
MRILVTNDDGIYSPGLWALAEAASQFGEVFVAAPDTHAITIAHPVRAYPHPSPLHAPHFPAYRVRGTPADCVALGLHLFG
PVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSVPLNGEVPDFAGLRPWLLRTLETLLRLERPFLVNVNLP
LRPKGFLWTRQSVRAYEGVVIPGEDPMGRPFYWFAPRPLKEAEEGTDRWAVAQGFVSATPLRLDLTDETRLQPT

The query sequence (length=234) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	2e6c:A	243	240	1.0000	0.9630	0.9750	2.15e-169	2e6b:A, 2e6b:B, 2e6b:C, 2e6b:D, 2e6c:B, 2e6c:C, 2e6c:D, 2e6h:A, 2e6h:B, 2e6h:C, 2e6h:D
2	2wqk:A	248	235	0.4231	0.3992	0.4213	3.90e-44	2wqk:B
3	1j9j:A	247	245	0.4060	0.3846	0.3878	5.71e-40	1j9j:B, 1j9k:A, 1j9k:B, 1j9l:A, 1j9l:B
4	4xer:A	264	238	0.4145	0.3674	0.4076	3.67e-37	4g9o:A, 4g9o:B, 4gad:A, 4gad:B, 4ryt:A, 4ryu:A, 4ryu:B, 4ryu:C, 4ryu:D, 2v4n:A, 2v4o:A, 2v4o:B, 2v4o:C, 2v4o:D, 4xep:A, 4xer:B, 4xer:C, 4xer:D, 4xgb:A, 4xgb:B, 4xgb:C, 4xgb:D, 4xgp:A, 4xgp:B, 4xgp:C, 4xgp:D, 4xj7:A, 4xj7:B, 4xj7:C, 4xj7:D
5	5ksr:D	259	247	0.3761	0.3398	0.3563	3.20e-32	5ksq:A, 5ksq:B, 5ksr:A, 5ksr:B, 5ksr:C, 5kss:A, 5kss:B, 5kst:A, 5kst:B, 5kst:C, 5kst:D
6	4zg5:D	252	251	0.3846	0.3571	0.3586	1.82e-29	4zg5:A, 4zg5:C, 4zg5:G
7	3ele:A	398	47	0.0470	0.0276	0.2340	0.78	3ele:B, 3ele:C, 3ele:D
8	2cb1:A	404	38	0.0684	0.0396	0.4211	1.2
9	2qll:A	806	29	0.0641	0.0186	0.5172	4.5	1em6:A, 1em6:B, 1exv:A, 1exv:B
10	4upl:A	555	35	0.0598	0.0252	0.4000	5.2	4upl:C
11	2xdq:A	425	40	0.0641	0.0353	0.3750	9.5
12	4e5y:C	290	61	0.0684	0.0552	0.2623	9.6

[Back]