BioLiP

>protein
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALM
RPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLTGRILNVNVP
DLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAASAHDVVS
DWLDSVGVGTQW

The query sequence (length=252) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	4xer:A	264	253	0.9960	0.9508	0.9921	0.0	4g9o:A, 4g9o:B, 4gad:A, 4gad:B, 4ryt:A, 4ryu:A, 4ryu:B, 4ryu:C, 4ryu:D, 2v4n:A, 2v4o:A, 2v4o:B, 2v4o:C, 2v4o:D, 4xep:A, 4xer:B, 4xer:C, 4xer:D, 4xgb:A, 4xgb:B, 4xgb:C, 4xgb:D, 4xgp:A, 4xgp:B, 4xgp:C, 4xgp:D, 4xj7:A, 4xj7:B, 4xj7:C, 4xj7:D
2	5ksr:D	259	255	0.5595	0.5444	0.5529	4.18e-84	5ksq:A, 5ksq:B, 5ksr:A, 5ksr:B, 5ksr:C, 5kss:A, 5kss:B, 5kst:A, 5kst:B, 5kst:C, 5kst:D
3	2wqk:A	248	233	0.4206	0.4274	0.4549	7.40e-62	2wqk:B
4	4zg5:D	252	242	0.4048	0.4048	0.4215	3.42e-50	4zg5:A, 4zg5:C, 4zg5:G
5	1j9j:A	247	239	0.3730	0.3806	0.3933	4.17e-46	1j9j:B, 1j9k:A, 1j9k:B, 1j9l:A, 1j9l:B
6	2e6c:A	243	239	0.3690	0.3827	0.3891	1.21e-37	2e6b:A, 2e6b:B, 2e6b:C, 2e6b:D, 2e6c:B, 2e6c:C, 2e6c:D, 2e6h:A, 2e6h:B, 2e6h:C, 2e6h:D
7	4utu:A	229	91	0.0992	0.1092	0.2747	0.10	4utu:B, 4utw:A, 4utw:B, 4utw:C, 4utw:D
8	5fl3:A	354	56	0.0635	0.0452	0.2857	2.6
9	5bxp:A	636	43	0.0635	0.0252	0.3721	5.7	5bxp:B, 5bxr:A, 5bxr:B, 5bxs:A, 5bxs:B, 5bxt:A, 5bxt:B, 4h04:A, 4h04:B, 4jaw:A, 4jaw:B

[Back]