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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
MRDRATIRRLNMYRQKERRNSRGKIIKPLQYQSTVASGTVARVEPNIKWFGNTRVIKQSSLQKFQEEMKDPYKVVMKQSK
LPMSLLHDRIRPHNLKVHILDTESFETTFGPKSQRKRPNLFASDMQSLIENAEMSTESYDQGKDRDLVTEDTGVRNEAQE
EIYKKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRSPHIETYLKKEKPWKHLIFVLNKCDLVPTWATKRWVAVLSQD
YPTLAFHASLTNPFGKGAFIQLLRQFGKLHTDKKQISVGFIGYPNVGKSSVINTLRSKKVCNVAPIAGETKVWQYITLMR
RIFLIDCPGVVYPSEDSETDIVLKGVVQVEKIKSPEDHIGAVLERAKPEYISKTYKIDSWENAEDFLEKLAFRTGKLLKG
GEPDLQTVGKMVLNDWQRGRIPFFVKPPNAEP

The query sequence (length=432) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8fl2:NC 511 436 0.9861 0.8337 0.9771 0.0 8fkz:NC, 8fl0:NC, 8fl3:NC, 8fl4:NC, 8idt:A, 8idy:A, 8ie3:A, 8ine:A, 8inf:A, 8ink:w, 8ipd:w, 8ipx:w, 8ipy:w, 8ir1:w, 8ir3:w
2 7btb:m 469 442 0.5741 0.5288 0.5611 1.27e-176 7bt6:m, 6ft6:m, 3jct:m, 6m62:m, 7oh3:m, 7ohq:m, 7oht:m, 7ug6:m, 7uoo:m, 7uqb:m, 7uqz:m, 7uui:m, 7v08:m, 6ylg:m, 6ylh:m
3 8pv1:Cd 462 440 0.5347 0.5000 0.5250 3.47e-156 8pv2:Cd, 8pv3:Cd, 8pv4:Cd, 8pv5:Cd, 8pv6:Cd, 8pv7:Cd, 8pv8:Cd, 8pvk:Cd, 8pvl:Cd
4 6n8j:m 378 427 0.5046 0.5767 0.5105 5.09e-142
5 7of1:m 229 282 0.2755 0.5197 0.4220 4.81e-61
6 8fkt:NB 387 287 0.2269 0.2532 0.3415 1.66e-51 8fkp:NB, 8fku:NB, 8fkv:NB, 8fkw:NB, 8fkx:NB, 8fky:NB, 8fkz:NB, 8fl0:NB, 8ink:u, 8ipd:u, 8ipx:u, 8ipy:u
7 8i9w:CL 397 316 0.2176 0.2368 0.2975 6.04e-35 8i9t:CL, 8i9v:CL, 8i9x:CL, 8i9y:CL, 8i9z:CL, 8ia0:CL, 8pv1:CL, 8pv2:CL, 8pv3:CL, 8pv4:CL, 8pv5:CL, 8pv6:CL, 8pv7:CL, 8pv8:CL, 8pvk:CL, 8pvl:CL
8 6qtz:o 325 275 0.1921 0.2554 0.3018 4.68e-33 6qik:o, 6ri5:o, 6rzz:o, 6s05:o
9 6n8n:W 377 289 0.1944 0.2228 0.2907 2.20e-31 6n8o:W
10 5t62:W 306 263 0.1852 0.2614 0.3042 2.01e-30
11 8hfr:v9 106 91 0.0995 0.4057 0.4725 6.33e-24
12 6lsr:1 247 195 0.1389 0.2429 0.3077 4.69e-18
13 3cnl:A 233 258 0.1713 0.3176 0.2868 6.70e-16 3cnn:A, 3cno:A
14 1puj:A 261 259 0.1458 0.2414 0.2432 1.16e-13 6ppk:W
15 6g0z:A 290 253 0.1458 0.2172 0.2490 2.82e-11 6g0z:B, 6g12:A, 6g12:B, 6g14:B, 6g14:A, 6g15:A, 6g15:B
16 7pd3:z 311 233 0.1505 0.2090 0.2790 1.56e-08 8pk0:z, 8qsj:z
17 7o9k:C 255 225 0.1343 0.2275 0.2578 4.06e-06 7o9m:C
18 3pqc:B 194 71 0.0486 0.1082 0.2958 2.18e-05 3pqc:A
19 3j8g:X 418 173 0.1088 0.1124 0.2717 2.56e-05
20 6yxy:EQ 471 53 0.0486 0.0446 0.3962 8.40e-05
21 3iev:A 302 78 0.0579 0.0828 0.3205 1.98e-04 7c1o:A, 3r9w:A, 3r9x:A
22 3i8x:B 261 58 0.0486 0.0805 0.3621 0.001 3hyt:A, 3hyt:B, 3hyt:C, 3i8x:A, 3i8x:C, 4r98:A, 4r98:B
23 7am2:BV 199 53 0.0440 0.0955 0.3585 0.001
24 6yxx:EM 308 247 0.1273 0.1786 0.2227 0.002
25 6yxy:EM 330 268 0.1319 0.1727 0.2127 0.004
26 5dn8:A 405 122 0.0741 0.0790 0.2623 0.005
27 5dn8:A 405 66 0.0509 0.0543 0.3333 0.008
28 8ir1:4 620 142 0.0856 0.0597 0.2606 0.006 8fkt:SR, 8fku:SR, 8fkv:SR, 8fkw:SR, 8fkx:SR, 8fky:SR, 8fkz:SR, 8fl0:SR, 8fl2:SR, 8fl3:SR, 8fl6:SR, 8fl7:SR, 8fl9:SR, 8fla:SR, 8flb:SR, 8flc:SR, 8fld:SR, 8fle:SR, 8flf:SR, 8idt:4, 8idy:4, 8ie3:4, 8ine:4, 8inf:4, 8ink:4, 8ipd:4, 8ipx:4, 8ipy:4, 8ir3:4, 6lss:4, 6lu8:4
29 8fl4:SR 593 142 0.0856 0.0624 0.2606 0.007 8fkr:SR, 8fks:SR
30 8hfr:rA 647 102 0.0671 0.0448 0.2843 0.008 7bt6:b, 7btb:b, 6c0f:W, 6ft6:b, 3jct:b, 5jcs:o, 6m62:b, 6n8j:b, 6n8k:b, 7nad:b, 7oh3:b, 7ohq:b, 7oht:b, 7r72:b, 7u0h:b, 7ug6:b, 7uoo:b, 7uqb:b, 7uqz:b, 7v08:b, 4v7f:o, 8v87:b, 6ylx:b, 6yly:b, 7z34:b
31 6ylg:b 613 102 0.0671 0.0473 0.2843 0.008 7nac:b, 7of1:b, 7r7a:b, 6ylh:b
32 2wib:A 261 58 0.0463 0.0766 0.3448 0.010 2wib:B, 2wic:A
33 1wf3:A 296 59 0.0509 0.0743 0.3729 0.013
34 8v83:b 423 102 0.0671 0.0686 0.2843 0.017 6elz:b, 6em1:b, 6em5:b, 7ohp:b, 7ohr:b, 7ohs:b, 7ohu:b, 7ohv:b, 8v84:b
35 1h65:A 257 84 0.0532 0.0895 0.2738 0.018 3bb1:A, 3bb1:B, 3bb1:C, 3bb1:D, 3bb1:E, 3bb1:F, 3bb1:G, 3bb1:H, 1h65:B, 1h65:C
36 2j3e:A 249 77 0.0602 0.1044 0.3377 0.023 3bb3:A, 3bb4:A, 3def:A
37 3a1s:A 255 100 0.0787 0.1333 0.3400 0.024 3a1s:B, 3a1t:A, 3a1u:A, 3a1u:B
38 5m7h:A 420 156 0.0718 0.0738 0.1987 0.029 4dcs:A, 4dct:A, 4dcu:A, 2hjg:A, 5mbs:A, 5x4b:A, 5x4b:B
39 5m7h:A 420 122 0.0625 0.0643 0.2213 1.9 4dcs:A, 4dct:A, 4dcu:A, 2hjg:A, 5mbs:A, 5x4b:A, 5x4b:B
40 7szs:A 204 94 0.0671 0.1422 0.3085 0.029 7szs:B
41 7am2:BT 300 222 0.1065 0.1533 0.2072 0.032
42 5ucv:A 187 57 0.0417 0.0963 0.3158 0.038
43 7rr5:R 355 70 0.0440 0.0535 0.2714 0.060
44 1svw:A 190 63 0.0394 0.0895 0.2698 0.092 1svi:A, 1svw:B
45 2gj8:D 172 60 0.0463 0.1163 0.3333 0.12 2gj8:A, 2gj8:B, 2gj8:C, 2gj9:A, 2gj9:B, 2gj9:C, 2gj9:D, 2gja:A, 2gja:B
46 1mky:A 407 96 0.0602 0.0639 0.2708 0.14
47 1t9h:A 287 80 0.0463 0.0697 0.2500 0.15
48 2wjg:A 170 80 0.0532 0.1353 0.2875 0.16 2wjg:B, 2wjh:A, 2wjh:B, 2wji:A, 2wji:B, 2wjj:A, 2wjj:B
49 7ohy:b 375 79 0.0625 0.0720 0.3418 0.17
50 7oi6:y 331 78 0.0579 0.0755 0.3205 0.23 8pk0:t
51 1xzq:A 449 122 0.0671 0.0646 0.2377 0.31 1xzq:B
52 1xzq:A 449 60 0.0440 0.0423 0.3167 0.71 1xzq:B
53 6xrs:B 392 128 0.0741 0.0816 0.2500 0.38 6xrs:A, 6xrs:D, 6xrs:C
54 6xrs:B 392 39 0.0347 0.0383 0.3846 2.7 6xrs:A, 6xrs:D, 6xrs:C
55 7nrc:So 347 65 0.0440 0.0548 0.2923 0.46
56 2ohf:A 327 136 0.0833 0.1101 0.2647 0.48
57 8eti:b 391 52 0.0509 0.0563 0.4231 0.51 8esr:b, 8etg:b
58 8etc:b 415 52 0.0509 0.0530 0.4231 0.51 8esq:b, 8etj:b
59 2dby:A 355 33 0.0324 0.0394 0.4242 0.59
60 8e0a:A 168 70 0.0486 0.1250 0.3000 0.68 8e0b:A
61 7y9i:A 362 38 0.0301 0.0359 0.3421 0.89
62 8oun:A 181 47 0.0347 0.0829 0.3191 0.91 8oum:A, 8oum:B, 8oum:C, 8oum:D, 8oum:E, 8oun:B
63 8pv1:CH 627 81 0.0556 0.0383 0.2963 1.3 8i9r:CH, 8i9t:CH, 8i9v:CH, 8i9w:CH, 8i9x:CH, 8i9y:CH, 8i9z:CH, 8ia0:CH, 8pv2:CH, 8pv3:CH, 8pv4:CH, 8pv5:CH, 8pv6:CH, 8pv7:CH, 8pv8:CH, 8pvk:CH, 8pvl:CH
64 8csq:a 263 64 0.0486 0.0798 0.3281 1.5
65 7odt:t 316 45 0.0301 0.0411 0.2889 1.6
66 6h4d:A 274 100 0.0787 0.1241 0.3400 2.7
67 3gvj:A 670 22 0.0231 0.0149 0.4545 2.8 3gvk:A, 3gvk:B, 3gvk:C, 3gvl:A, 3ju4:A, 1v0f:C, 1v0f:D, 1v0f:E, 1v0f:A, 1v0f:B, 1v0f:F
68 8kab:h 430 25 0.0278 0.0279 0.4800 3.1
69 7c4c:A 332 41 0.0301 0.0392 0.3171 3.2 7c42:A, 7c43:A, 7c45:A, 7c47:A, 7c4b:A
70 3geh:A 442 74 0.0532 0.0520 0.3108 3.2
71 3ieu:A 293 56 0.0370 0.0546 0.2857 4.4 3ieu:B
72 8kie:y 363 38 0.0301 0.0358 0.3421 5.1
73 1lnz:A 342 22 0.0231 0.0292 0.4545 5.2 1lnz:B
74 7obn:A 299 76 0.0463 0.0669 0.2632 5.3
75 7o9k:G 337 32 0.0255 0.0326 0.3438 5.8 7of5:x, 7of7:x
76 3aq4:A 170 110 0.0509 0.1294 0.2000 6.0 3aq4:B
77 1lfu:P 82 19 0.0231 0.1220 0.5263 6.1 1b72:B, 1b8i:B, 4cyc:B, 1puf:B, 2r5y:B, 2r5z:B, 4uus:B, 4uus:F, 5zjq:B, 5zjr:B, 5zjs:B, 5zjt:B
78 1fiw:A 260 57 0.0417 0.0692 0.3158 6.4
79 3kxi:A 326 19 0.0231 0.0307 0.5263 6.6 2qth:A
80 4jyb:A 323 76 0.0602 0.0805 0.3421 6.7 8dpb:A, 8dpb:B, 4jyb:B, 4jyc:D, 4lc1:A, 4lc1:B, 2qm7:A, 2qm7:B
81 5lr8:A 844 55 0.0394 0.0201 0.3091 7.3 5lr8:B, 5lra:A, 5lra:B, 5lrb:B, 5lrb:A
82 3avt:A 1203 60 0.0440 0.0158 0.3167 8.1 7abz:6, 5afi:z, 3agp:A, 3agq:A, 3avu:A, 3avv:A, 3avw:A, 3avx:A, 3avy:A, 7bbn:A, 7bbn:B, 2bvn:A, 2bvn:B, 1efm:A, 1etu:A, 4fwt:A, 2hcj:A, 2hcj:B, 2hdn:A, 2hdn:B, 2hdn:C, 2hdn:D, 2hdn:E, 2hdn:F, 2hdn:G, 2hdn:H, 2hdn:I, 2hdn:J, 2hdn:K, 2hdn:L, 5i4r:C, 5i4r:D, 5i4r:G, 5i4r:H, 3mmp:G, 5opd:A, 5opd:B, 4pc2:A, 4pc2:B, 4pc3:A, 4pc3:B, 4pc6:A, 4pc6:B, 4pc7:A, 3u6b:B, 3u6b:A, 3vnu:A, 3vnv:A, 6wd4:8, 6wd7:8, 6wd9:8, 6wda:8
83 6vs4:A 223 139 0.0718 0.1390 0.2230 9.5 6vs4:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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