BioLiP

>protein
MQKLLSPRTARHARLFRLAGKLADSGSPGVPKSDGERLVWVNSHVRRDKDISLSQEEERIRELMMPLHGNLFYFREYPMY
PGEYVPAEHNTLSSLRDELRLDLTAQSLKEAWMRVSGGVYFQSVDEYYASVDGLDAEQIGEVLAALFPELNCYEAQALVQ
RTLECISRPVSAASRQLSRTITAEAVGLDNAPGHYTNFLEWMGRLTETRAFKTEHALFEFSRRKFNRDDVRVMFENYRLM
SKATLLADSADSYSHFYTVLKDFARKVAGQIGVRIDEAEVDPETGIAVGRGCADGEKYHFTALLRENRDHNGIITVMGKP
LSLVLDNKAWLMEMVLMPFDEANLDYRDFDAHIVSEGHAMPSIANEIAAFALRMAVANALVKLIPLTRIPLKKSGLLSVD
RRRERGQFPGYLDGKKVKRRFAKR

The query sequence (length=424) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	7pub:CI	427	427	0.9953	0.9883	0.9883	0.0	6hiv:CI, 6hiw:CI, 7pua:CI, 6sg9:CI, 6sgb:CI
2	7aor:d	445	445	0.8608	0.8202	0.8202	0.0
3	7ane:d	343	346	0.6486	0.8017	0.7948	0.0
4	6hiz:CI	222	155	0.3656	0.6982	1.0000	1.39e-109
5	6hiz:CI	222	68	0.1580	0.3018	0.9853	8.77e-39
6	5mmj:i	144	99	0.0755	0.2222	0.3232	0.004	6eri:BI, 5mmm:i, 4v61:AI, 5x8p:i, 5x8r:i
7	8uu5:i	127	111	0.0755	0.2520	0.2883	0.056	7nhn:j, 8uu4:i, 8uu6:i, 8uu7:i, 8uu8:i, 8uu9:i
8	7nhk:j	128	115	0.0849	0.2812	0.3130	0.13	6o8w:i, 6o8x:i, 6o8y:i, 6o8z:i, 6o90:i, 7p7q:j, 7p7r:j, 7p7s:j, 7p7t:j, 7p7u:j, 6w6p:i, 6wua:i
9	5myj:AI	129	114	0.0731	0.2403	0.2719	0.23
10	3j9w:AI	130	57	0.0519	0.1692	0.3860	0.30	8buu:i, 8cdu:J, 8cdv:J, 8cec:N, 8ced:J, 8cee:J, 6ha1:i, 6ha8:i, 6htq:i, 5njt:I, 7o5b:I, 8qcq:i, 7qgu:n, 7qh4:m, 8qpp:I, 7qv1:i, 7qv2:i, 7qv3:i, 8r55:I
11	6ns2:A	634	89	0.0519	0.0347	0.2472	0.37	6ns2:C
12	8bh6:i	128	113	0.0731	0.2422	0.2743	0.55	7aso:H, 7asp:q, 7bge:i, 8bh7:i, 8byv:i, 6fxc:Ai, 6fxc:Bi, 7kwg:i, 5li0:i, 5nd8:i, 5nd9:i, 5ngm:Ai, 7nhl:j, 7nhm:j, 8p2f:j, 8p2g:j, 8p2h:j, 7p48:i, 6s0x:i, 6s13:i, 5tcu:SH, 8y38:i, 8y39:i, 6yef:i
13	8aq2:A	520	118	0.0778	0.0635	0.2797	0.75
14	6ns4:A	685	71	0.0425	0.0263	0.2535	1.4	6ns3:A, 6ns4:B, 6ns5:A, 6ns5:B, 6ns6:A, 6ns6:B
15	6lpf:B	1006	38	0.0330	0.0139	0.3684	1.8	6kid:A, 6kie:A, 6kqy:A, 6kr7:A, 6lpf:A, 6lr6:A, 6lr6:B
16	7kgb:i	127	32	0.0354	0.1181	0.4688	2.4	6dzi:4, 6dzk:I, 8fr8:k, 7msc:i, 7msh:i, 7msm:i, 7msz:i, 7mt2:i, 7mt3:i, 7mt7:i, 5o5j:I, 5o61:BI, 7sfr:i, 5v93:i, 8v9j:i, 8v9k:i, 8v9l:i, 8whx:j, 8wi7:j, 8wi9:j, 8wib:j, 8wid:j, 8wif:j, 5xyu:I, 5zeb:i, 5zep:i, 5zeu:i
17	2zy4:F	535	59	0.0590	0.0467	0.4237	2.8	3fdd:A, 2zy3:A, 2zy3:B, 2zy3:C, 2zy3:D, 2zy3:E, 2zy3:F, 2zy4:A, 2zy4:B, 2zy4:C, 2zy4:D, 2zy4:E, 2zy5:A, 2zy5:B, 2zy5:C, 2zy5:D, 2zy5:E, 2zy5:F
18	1vbg:A	874	42	0.0354	0.0172	0.3571	3.7	1vbh:A
19	7t30:A	666	116	0.0708	0.0450	0.2586	5.4	7t2r:A, 7t2r:F, 7t30:F
20	8rdv:F	126	93	0.0566	0.1905	0.2581	5.7	8rd8:F, 8rdw:F

[Back]