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BioLiP
>protein
MPLEAGLLEILACPACHAPLEERDAELICTGQDCGLAYPVRDGIPVLLVDEARRPE

The query sequence (length=56) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2kpi:A 56 56 1.0000 1.0000 1.0000 1.68e-34
2 2hf1:A 61 52 0.4643 0.4262 0.5000 7.86e-10 2hf1:B
3 6zxw:H 57 55 0.3571 0.3509 0.3636 0.067
4 1qz7:A 524 21 0.2321 0.0248 0.6190 2.9 7afw:A, 7ar4:AAA, 4djs:A, 8ei9:A, 8eia:A, 8eib:A, 8eic:A, 2gl7:A, 2gl7:D, 1i7w:A, 1i7w:C, 1jpp:A, 1jpp:B, 1jpw:A, 1jpw:B, 1jpw:C, 3ouw:A, 8ru3:A, 8ru4:A, 8ru4:B, 3sl9:A, 3sl9:E, 3sl9:B, 3sl9:G, 1t08:A, 7uwi:A, 7uwo:A, 8y0p:A, 8y0p:B, 8z10:A
5 6hiy:DA 1426 22 0.1964 0.0077 0.5000 3.7
6 6hiv:DA 1557 22 0.1964 0.0071 0.5000 3.7 6hiw:DA, 7pub:DA
7 5xnz:A 439 14 0.1786 0.0228 0.7143 3.9
8 1p91:A 268 19 0.1429 0.0299 0.4211 5.2 1p91:B
9 6r2q:A 265 20 0.1607 0.0340 0.4500 7.1
10 2j6a:A 136 18 0.1429 0.0588 0.4444 7.6 4qtt:A, 4qtt:C, 4qtu:A, 4qtu:C

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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