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BioLiP
>protein
MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNARLEFLGDSILSYVIANALYHRFPRVDAGDMSRMRATLVRGNT
LAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRL
QEYLAGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE

The query sequence (length=226) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7r97:A 226 226 1.0000 1.0000 1.0000 3.19e-169 7r97:B
2 1yyk:A 221 224 0.3363 0.3439 0.3393 6.17e-33 2ez6:A, 2ez6:B, 1jfz:A, 1jfz:B, 1jfz:C, 1jfz:D, 4m2z:A, 4m2z:B, 4m30:A, 4m30:B, 2nue:A, 2nuf:A, 2nuf:B, 2nug:A, 2nug:B, 1rc5:A, 1rc5:B, 1rc5:C, 1rc5:D, 1rc7:A, 1yyo:A, 1yyw:A, 1yyw:C, 1yz9:A
3 2a11:A 154 134 0.2389 0.3506 0.4030 8.89e-25
4 5b16:A 722 227 0.2920 0.0914 0.2907 3.84e-23
5 5b16:A 722 164 0.1991 0.0623 0.2744 1.16e-13
6 6lxd:A 918 227 0.2920 0.0719 0.2907 6.75e-23 9asm:A, 9asn:A, 9aso:A, 9asp:A, 9asq:A, 6v5b:A, 6v5c:A
7 6lxd:A 918 103 0.1460 0.0359 0.3204 5.24e-12 9asm:A, 9asn:A, 9aso:A, 9asp:A, 9asq:A, 6v5b:A, 6v5c:A
8 7w0b:A 1586 251 0.3009 0.0429 0.2709 3.98e-17 7w0d:F
9 8hf0:A 1561 257 0.3009 0.0436 0.2646 3.00e-16 8hf0:D, 8hf1:A, 8hf1:D, 8hf1:G, 7w0a:A, 7w0a:E, 7w0c:A, 7w0d:A, 7w0e:A, 7w0f:A
10 7v6c:A 1540 250 0.2965 0.0435 0.2680 3.05e-16
11 6lxe:A 768 152 0.1991 0.0586 0.2961 1.26e-14
12 6lxe:A 768 147 0.1903 0.0560 0.2925 8.16e-14
13 7xw2:A 725 249 0.2832 0.0883 0.2570 8.57e-13
14 7xw2:A 725 120 0.1770 0.0552 0.3333 4.14e-05
15 7eld:A 1137 126 0.1903 0.0378 0.3413 1.51e-12 7ele:A
16 7eld:A 1137 88 0.1283 0.0255 0.3295 1.28e-05 7ele:A
17 7yym:A 1281 234 0.2743 0.0484 0.2650 4.44e-12 4ngb:A, 4ngc:A, 4ngg:A, 4nh3:A, 4nh5:A, 4nh6:A, 7yyn:A, 7zpi:A, 7zpj:A, 7zpk:A
18 7yym:A 1281 116 0.1637 0.0289 0.3190 6.14e-05 4ngb:A, 4ngc:A, 4ngg:A, 4nh3:A, 4nh5:A, 4nh6:A, 7yyn:A, 7zpi:A, 7zpj:A, 7zpk:A
19 5zal:A 1314 238 0.2743 0.0472 0.2605 2.65e-11 2eb1:A, 2eb1:B, 2eb1:C, 4ngd:A, 5zam:A
20 5zal:A 1314 101 0.1504 0.0259 0.3366 4.91e-06 2eb1:A, 2eb1:B, 2eb1:C, 4ngd:A, 5zam:A
21 5t16:A 276 202 0.2611 0.2138 0.2921 1.72e-10 2lbs:B, 2lup:B, 4oog:C, 5t16:B, 5t16:I, 5t16:J, 1t4l:B
22 7vg3:A 860 235 0.2522 0.0663 0.2426 4.14e-10 7vg2:A
23 7vg3:A 860 87 0.1150 0.0302 0.2989 6.56e-06 7vg2:A
24 3rv0:B 304 103 0.1504 0.1118 0.3301 7.45e-10 3rv0:A, 3rv0:C, 3rv0:D
25 8dfv:A 1664 144 0.1858 0.0252 0.2917 4.04e-09
26 8dfv:A 1664 93 0.1372 0.0186 0.3333 4.29e-05
27 8dg5:A 1635 144 0.1858 0.0257 0.2917 4.23e-09 8dg7:A
28 8dg5:A 1635 91 0.1372 0.0190 0.3407 4.60e-05 8dg7:A
29 8dga:A 1629 96 0.1460 0.0203 0.3438 1.23e-07
30 8dga:A 1629 97 0.1416 0.0196 0.3299 3.63e-05
31 1di2:A 69 69 0.1195 0.3913 0.3913 1.64e-07
32 7zpk:C 233 77 0.1195 0.1159 0.3506 5.85e-07 3adl:A, 5n8l:A, 5n8m:A
33 7zpk:C 233 81 0.1195 0.1159 0.3333 0.25 3adl:A, 5n8l:A, 5n8m:A
34 3adi:A 71 67 0.1106 0.3521 0.3731 7.69e-05
35 2ffl:A 732 86 0.1106 0.0342 0.2907 7.75e-04 2ffl:B, 2ffl:C, 2ffl:D, 2qvw:A, 2qvw:B, 2qvw:C, 2qvw:D
36 2ffl:A 732 67 0.0973 0.0301 0.3284 0.47 2ffl:B, 2ffl:C, 2ffl:D, 2qvw:A, 2qvw:B, 2qvw:C, 2qvw:D
37 8dfv:K 253 74 0.1062 0.0949 0.3243 0.002 8dg5:K
38 8dfv:K 253 72 0.1062 0.0949 0.3333 0.007 8dg5:K
39 1di2:B 60 69 0.1062 0.4000 0.3478 0.003
40 8dga:K 182 72 0.1062 0.1319 0.3333 0.006 8dg7:K
41 7v6c:B 260 77 0.1018 0.0885 0.2987 0.013
42 7v6c:B 260 66 0.1062 0.0923 0.3636 0.036
43 3j6b:5 326 219 0.2212 0.1534 0.2283 0.13 5mrc:5, 5mre:5, 5mrf:5
44 4b9h:A 189 29 0.0487 0.0582 0.3793 0.13
45 6ywe:5 350 69 0.0841 0.0543 0.2754 0.28 6yws:5, 6ywv:5, 6ywx:5, 6ywy:5
46 2l3j:A 236 50 0.0664 0.0636 0.3000 1.0 2l3c:A
47 6sdw:A 177 66 0.0796 0.1017 0.2727 1.6 6htu:A, 6htu:B, 6htu:C, 6sdy:A
48 6q03:A 416 37 0.0664 0.0361 0.4054 1.7 6q0a:A, 6q0y:A, 6q11:A
49 8d84:A 420 57 0.0841 0.0452 0.3333 2.2 8d84:B, 8d84:C, 8d84:D, 8d84:E, 8d84:F, 8d84:G, 8d84:H, 8d84:I, 8d84:J, 8d84:K, 8d84:L, 7tb0:A, 7tb0:B, 7tb0:C, 7tb0:D
50 5ks8:F 482 51 0.0841 0.0394 0.3725 8.9

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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