BioLiP

>protein
MNLLIDNWIPVRPRNGGKVQIINLQSLYCSRDQWRLSLPRDDMELAALALLVCIGQIIAPAKDDVEFRHRIMNPLTEDEF
QQLIAPWIDMFYLNHAEHPFMQTKGVKANDVTPMEKLLAGVSGATNCAFVNQPGQGEALCGGCTAIALFNQANQAPGFGG
GFKSGLRGGTPVTTFVRGIDLRSTVLLNVLTLPRLQKQFPTENQPTWIKPIKSNESIPASSIGFVRGLFWQPAHIELCDP
IGIGKCSCCGQESNLRYTGFLKEKFTFTVNGLWPHPHSPCLVTVKKGEVEEKFLAFTTSAPSWTQISRVVVDKIIQNENG
NRVAAVVNQFRNIAPQSPLELIMGGYRNNQASILERRHDVLMFNQGWQQYGNVINEIVTVGLGYKTALRKALYTFAEGFK
NKDFKGAGVSVHETAERHFYRQSELLIPDVLANVNFSQADEVIADLRDKLHQLCEMLFNQSVAPYAHHPKLISTLALARA
TLYKHLRELKPQ

The query sequence (length=492) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	5cd4:I	494	495	0.9959	0.9919	0.9899	0.0	5cd4:U, 5h9e:A, 5h9f:A, 4tvx:I, 4tvx:U, 4u7u:M
2	4qyz:A	468	495	0.9431	0.9915	0.9374	0.0
3	8yb6:J	443	263	0.1179	0.1309	0.2205	0.049	8yha:J
4	7dia:A	1072	55	0.0427	0.0196	0.3818	0.073	3s5k:A, 8wyt:A, 8wyx:A, 8wyy:A
5	3s5m:A	1094	55	0.0427	0.0192	0.3818	0.073	7di7:A, 7dij:A, 8ho4:A, 8ho5:A, 3s5h:A, 7vpe:A, 8wxw:A, 8wxz:A, 8wyu:A
6	8h1l:B	423	167	0.0671	0.0780	0.1976	2.8	8h1l:C, 8h1n:A
7	8szq:A	861	70	0.0427	0.0244	0.3000	2.9	3llm:A, 3llm:B, 8szp:A, 8szp:B, 8szr:A, 8szs:A
8	6aqg:C	490	57	0.0386	0.0388	0.3333	3.7	6aqg:A, 6aqg:B, 6aqg:D, 5vl1:A, 5vl1:B, 5vl1:C, 5vl1:D
9	6p25:B	690	83	0.0407	0.0290	0.2410	4.3	6p2r:B
10	8hyj:A	1141	52	0.0407	0.0175	0.3846	9.6
11	5n2s:A	383	77	0.0488	0.0627	0.3117	9.7	6d9h:R, 7ld3:R, 7ld4:R

[Back]