BioLiP

>protein
MNKQRTLSRGVNYRHRHLIQDLSGLLPHSRKEPKLDTLQQLNEIAELYNCNNVLFFEARKHQDLYLWLSKPPNGPTIKFY
IQGSRPVLSFDQRFESSPHYQLIKELLVHNFGVPPNARKSKPFIDHVMSFSIVDDKIWVRTY

The query sequence (length=142) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	7nac:A	266	164	1.0000	0.5338	0.8659	3.65e-97	6c0f:b, 6cb1:b, 8e5t:b, 6elz:A, 6em1:A, 6em3:A, 6em4:A, 7ohr:A, 7ohs:A, 7ohv:A, 7ohw:A, 7r7a:A, 8v83:A, 8v84:A, 8v87:A, 5z3g:a
2	8i9p:CA	260	163	0.6901	0.3769	0.6012	1.86e-65	8i9r:CA, 8i9t:CA, 8i9v:CA, 8i9w:CA, 8i9x:CA, 8i9y:CA, 8i9z:CA, 8ia0:CA
3	8eti:A	254	162	0.5845	0.3268	0.5123	1.54e-57	8esq:A, 8esr:A, 8etg:A, 8eth:A, 8eup:A, 8euy:A, 8ev3:A
4	8fkp:SO	307	163	0.5423	0.2508	0.4724	1.78e-48	8fkq:SO, 8fkr:SO, 8fks:SO, 8fkt:SO, 8fku:SO, 8fkv:SO, 8fkw:SO, 8fkx:SO, 8fky:SO
5	8fl0:ND	270	62	0.1197	0.0630	0.2742	0.016	8ir1:T, 8ir3:T
6	8eza:L	3720	51	0.1408	0.0054	0.3922	2.4	8eza:C, 7lt3:C, 7lt3:L
7	8ez9:L	3662	51	0.1408	0.0055	0.3922	2.4	8ez9:C
8	8ezb:C	3724	51	0.1408	0.0054	0.3922	2.5	8ezb:L
9	7mwz:D	301	41	0.1127	0.0532	0.3902	3.8
10	7mwz:B	352	41	0.1127	0.0455	0.3902	3.9	7mwz:A, 7mwz:C
11	6ry0:A	410	109	0.1831	0.0634	0.2385	5.3	6ry1:A, 6ry2:A, 6ry5:A, 6ry6:A, 6ry7:A
12	8v83:Z	253	28	0.0563	0.0316	0.2857	7.4	6c0f:v, 8v84:Z
13	8fni:14	315	49	0.1338	0.0603	0.3878	7.5	8fnc:14, 8fnf:14, 8fnk:14

[Back]