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BioLiP
>protein
MNKILIITHTADNFSIDKVTEYIDKNGCEVIRFNVDEYPLKNKLSTTFQDGKWTTTLETPEKKNSLEDISTVWYRRAYNI
GHGIKEELDAKFYGAAMGEIRNTLFGFLESIDAYSLGKPSVYRRLDSKEEQLKIADKIGFKIPATCVTNNPEEAKRFIVK
HRDVVAKMQTGFAIYEDGVENVVFTNVVNEDKLEELDTLLYCPMQFQKKIEKKKELRITVVGRDVYAFEIDSQQSEAAKT
DWRKDGINLIDKWIPTELPQDIEFMILELLDVYHVDYGAIDMIVSPEDEYYFIEINAAGEFFWLDNLTEENRISKSIADL
LCDKAPRRDNRVL

The query sequence (length=333) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7mgv:A 333 333 1.0000 1.0000 1.0000 0.0 7mgv:B
2 5ig9:A 319 325 0.3664 0.3824 0.3754 1.99e-70 5ig9:H, 5ig9:B, 5ig9:C, 5ig9:D, 5ig9:E, 5ig9:F, 5ig9:G
3 7drp:A 312 346 0.2072 0.2212 0.1994 0.001 7drm:A, 7drm:B, 7drm:C, 7drm:D, 7drn:A, 7drn:B, 7drn:C, 7dro:A, 7dro:B, 7dro:C, 7dro:E, 7drp:C, 7drp:D, 7drp:B
4 2aou:B 289 197 0.1291 0.1488 0.2183 0.45 2aot:A, 2aot:B, 2aou:A, 2aov:A, 2aov:B, 2aow:A, 2aow:B, 2aox:A, 2aox:B, 1jqd:A, 1jqd:B, 1jqe:A, 1jqe:B
5 4p07:A 570 124 0.0931 0.0544 0.2500 0.53 3elq:A, 3elq:B, 3ets:A, 3ets:B, 3ett:A, 3ett:B, 4p04:B, 4p05:A, 4p05:B, 4p06:A, 4p06:B, 4p07:B
6 2bo6:A 380 65 0.0480 0.0421 0.2462 0.87 2bo6:B, 2bo7:A, 2bo7:B, 2bo7:C, 2bo7:D, 2bo7:E, 2bo7:F, 2bo7:G, 2bo7:H, 2bo7:I, 2bo7:J, 2bo8:A, 2bo8:B, 2bo8:C, 2bo8:D, 2bo8:E, 2bo8:F, 2bo8:G, 2bo8:H, 2bo8:I, 2bo8:J, 2y4k:A, 2y4k:B, 2y4l:A, 2y4l:B, 2y4m:A, 2y4m:B
7 7agb:A 339 48 0.0450 0.0442 0.3125 1.3 7agb:B, 7agb:C, 7agb:D, 7agc:D, 7agc:A, 7agc:B, 7agc:F, 7agd:A, 7agd:B, 7agd:C, 7agd:D, 7age:A, 7age:B, 7age:D, 7age:F, 3fv3:A, 3fv3:B, 3fv3:C, 3fv3:D, 3fv3:E, 3fv3:F, 3fv3:G, 3fv3:H, 3tne:A, 3tne:B
8 8q0j:B 158 41 0.0420 0.0886 0.3415 1.6 7ak5:B, 7ak6:B, 7b93:B, 8c2s:B, 8ca3:B, 8ca5:B, 7dgq:D, 7dgr:D, 7dgs:D, 7dgz:D, 7dh0:D, 7dkf:D2, 6g2j:B, 6g72:B, 5gpn:a, 5gup:I, 8iao:B, 8iap:B, 8ib4:B, 8ib5:B, 8ib9:B, 8iba:B, 8ibd:B, 8ibe:B, 8ic2:B, 8ic3:B, 5lc5:B, 5ldw:B, 5ldx:B, 5lnk:6, 5o31:B, 8olt:B, 8om1:B, 7psa:B, 8pw5:6, 8pw6:6, 8pw7:6, 8q0a:B, 8q0f:B, 8q0m:B, 8q0o:B, 8q0q:B, 8q1p:B, 8q1u:B, 8q1y:B, 8q25:B, 8q45:B, 8q46:B, 8q47:B, 8q48:B, 8q49:B, 8q4a:B, 6q9d:S7, 6qa9:S7, 6qbx:S7, 6qc2:S7, 6qc3:S7, 6qc4:S7, 6qc5:S7, 6qc6:S7, 6qc7:S7, 6qc8:S7, 6qc9:S7, 6qca:S7, 6qcf:S7, 7qsd:B, 7qsk:B, 7qsl:B, 7qsm:B, 7qsn:B, 7qso:B, 7r41:B, 7r42:B, 7r43:B, 7r44:B, 7r45:B, 7r46:B, 7r47:B, 7r48:B, 7r4c:B, 7r4d:B, 7r4f:B, 7r4g:B, 8rgp:6, 8rgq:6, 8rgr:6, 8rgt:6, 8ud1:1B, 8ueo:1B, 8uep:1B, 8ueq:1B, 8uer:1B, 8ues:1B, 8uet:1B, 8ueu:1B, 8uev:1B, 8uew:1B, 8uex:1B, 8uey:1B, 8uez:1B, 8ugh:1B, 8ugi:1B, 8ugj:1B, 8ugn:1B, 8ugn:5B, 8ugp:1B, 8ugr:1B, 8ugr:5B, 7v2c:C, 7v2d:C, 7v2e:C, 7v2f:C, 7v2h:C, 7v2k:C, 7v2r:C, 7v30:C, 7v31:C, 7v32:C, 7v33:C, 7v3m:C, 7vb7:C, 7vbn:C, 7vbz:C, 7vwj:C, 7vxp:C, 7vxu:C, 7vy8:C, 7vya:C, 7vyf:C, 7vyh:C, 7vyn:C, 7vz1:C, 7vzv:C, 7vzw:C, 7w00:C, 7w0h:C, 7w0r:C, 7w0y:C, 7w1o:C, 7w1p:C, 7w1t:C, 7w1u:C, 7w1v:C, 7w1z:C, 7w20:C, 7w2k:C, 7w2l:C, 7w2r:C, 7w2u:C, 7w2y:C, 7w31:C, 7w32:C, 7w35:C, 7w4c:C, 7w4d:C, 7w4e:C, 7w4f:C, 7w4g:C, 7w4j:C, 7w4k:C, 7w4l:C, 7w4m:C, 7w4n:C, 7w4q:C, 5xtb:C, 5xtd:C, 5xth:C, 5xti:C, 5xti:BC, 7zd6:6, 7zdh:6, 7zdj:6, 7zdm:6, 7zdp:6, 7zeb:6, 6zk9:6, 6zkc:6, 6zkd:6, 6zke:6, 6zkf:6, 6zkg:6, 6zkh:6, 6zki:6, 6zkj:6, 6zkk:6, 6zkl:6, 6zkm:6, 6zkn:6, 6zko:6, 6zkp:6, 6zkq:6, 6zkr:6, 6zks:6, 6zkt:6, 6zku:6, 6zkv:6, 6zr2:B, 6ztq:B
9 1h7a:A 563 62 0.0541 0.0320 0.2903 3.7 1h78:A, 1h79:A, 1h7b:A, 1hk8:A
10 6pwj:A 408 53 0.0450 0.0368 0.2830 3.8 6pwj:B, 6pwk:A, 6pwk:B
11 7fix:B1 740 22 0.0390 0.0176 0.5909 3.8 7bw2:B, 4fe1:B, 7fix:B2, 7fix:B3, 1jb0:B, 6k33:aB, 6k33:bB, 6k33:cB, 7m75:B, 7m76:B, 7m78:B, 3pcq:B, 6pfy:H, 6pfy:B, 6pfy:Z, 6pgk:H, 6pgk:B, 6pgk:Z, 6tra:B, 6trc:B, 6trc:b, 6trc:2, 6trd:B, 6trd:b, 6trd:2, 5zf0:B1, 5zf0:B2, 5zf0:B3, 5zf0:B4, 5zf0:B6, 5zf0:B5
12 8sgx:X 657 25 0.0270 0.0137 0.3600 5.5 8sgx:S, 8sgx:Z, 8sgx:V, 8sgy:V, 8sgy:B, 8sgy:S, 8sgy:Z, 8sgy:Y, 8sgz:V, 8sgz:Z, 8sgz:X, 8sgz:S, 8sgz:B, 8sgz:Y
13 5b46:A 627 37 0.0450 0.0239 0.4054 7.3 5b47:A
14 7qco:B 734 22 0.0390 0.0177 0.5909 9.0 7qco:G, 7qco:g, 7qco:b
15 7xyr:A 546 65 0.0571 0.0348 0.2923 9.6

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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