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BioLiP
>protein
MNELVFIDDFDNHVVIMSEVVMRLNSYRQTHYTSTESGGTLIGERRGQHLVITHISEPGQDDVRNRTGLERKGIHHQQKV
NDLFQQSNGFIVYLGEWHTHPEDFPHPSFIDIKSWVMGIVATEPMIMLIVGRKDIWIGKKIKNDIKKLKKKM

The query sequence (length=152) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 9ild:A 152 152 1.0000 1.0000 1.0000 1.08e-111
2 6nu8:A 488 42 0.0855 0.0266 0.3095 0.11
3 8tpu:S8 317 59 0.1053 0.0505 0.2712 0.42
4 1e7d:A 157 97 0.1513 0.1465 0.2371 1.9 1e7d:B, 1e7l:A, 1e7l:B, 1en7:A, 1en7:B, 2qnc:A, 2qnc:B, 2qnf:A, 2qnf:B
5 8oz7:A 597 32 0.0526 0.0134 0.2500 5.2 8oz7:B, 8oz7:C, 8oz7:D
6 2fk6:A 307 57 0.0987 0.0489 0.2632 5.7 4gcw:A
7 1y44:A 269 33 0.0724 0.0409 0.3333 6.5
8 1yge:A 839 37 0.0987 0.0179 0.4054 8.1 3bnb:A, 3bnc:A, 3bnd:A, 3bne:A, 5eeo:A, 1f8n:A, 1fgm:A, 1fgo:A, 1fgq:A, 1fgr:A, 1fgt:A, 3pzw:A, 2sbl:B, 2sbl:A, 7soi:A, 7soi:B, 7soj:A, 7soj:B, 5t5v:A, 5t5v:B, 5tqn:A, 5tqn:B, 5tqo:A, 5tqo:B, 5tqp:A, 5tqp:B, 5tr0:A, 5tr0:B, 4wfo:A, 4wha:A, 1y4k:A
9 4cot:A 443 88 0.1382 0.0474 0.2386 8.7 2x8s:A, 2x8s:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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