BioLiP

>protein
MNASDFRRRGKEMVDYMADYLEGIEGRQVYPDVQPGYLRPLIPATAPQEPDTFEDILQDVEKIIMPGVTHWHSPYFFAYF
PTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAAR
TKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVV
ATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKRRT
DLTGAFKSGLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLGLVCFR
LKGSDGLNEALLERINSARKIHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHIRGLAAELLA

The query sequence (length=464) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	1js3:A	464	464	1.0000	1.0000	1.0000	0.0	1js3:B, 1js6:A, 1js6:B
2	8ora:A	480	475	0.8901	0.8604	0.8695	0.0	8or9:A
3	3rbf:A	443	463	0.8405	0.8804	0.8423	0.0	3rch:B
4	4e1o:C	481	475	0.5172	0.4990	0.5053	0.0	4e1o:A, 4e1o:B, 4e1o:D, 4e1o:E, 4e1o:F, 7eiw:A, 7eiw:B, 7eix:A, 7eix:B, 7eiy:A, 7eiy:B
5	6eei:B	471	476	0.4978	0.4904	0.4853	8.48e-161	6eei:A
6	6eem:B	488	488	0.4203	0.3996	0.3996	1.97e-132	6eem:A
7	6eew:A	479	486	0.4267	0.4134	0.4074	7.55e-130	6eew:B, 6eew:C, 6eew:D
8	6khn:A	490	491	0.4289	0.4061	0.4053	7.59e-126	6khn:B, 6kho:A, 6kho:B, 6khp:A, 6khp:B
9	7xin:A	470	469	0.3922	0.3872	0.3881	1.44e-105	7xin:C, 7xin:E
10	4obv:C	471	385	0.2414	0.2378	0.2909	1.21e-47	4obu:E, 4obu:A, 4obu:U, 4obu:G, 4obu:H, 4obu:F, 4obu:B, 4obu:C, 4obv:D, 4obv:B, 4obv:A
11	4riz:C	476	411	0.2500	0.2437	0.2822	5.95e-36	4riz:A, 4riz:D, 4rj0:D, 4rlg:A, 4rlg:B, 4rlg:D, 4rlg:C, 4rm1:B, 4rm1:C
12	2okj:B	504	368	0.2155	0.1984	0.2717	3.47e-34	2okj:A, 3vp6:A, 3vp6:B
13	2okk:A	483	344	0.2004	0.1925	0.2703	4.86e-34
14	6enz:A	487	376	0.2155	0.2053	0.2660	6.86e-34	6enz:B
15	5o5c:B	468	374	0.2069	0.2051	0.2567	1.60e-29	5o5c:A, 5o5c:C, 5o5c:D, 5o5c:E, 5o5c:F
16	2jis:B	487	382	0.2069	0.1971	0.2513	1.94e-29	2jis:A, 6zek:A, 6zek:B, 6zek:C, 6zek:D
17	3f9t:A	394	200	0.1013	0.1193	0.2350	1.65e-06	3f9t:B, 6ldr:A, 6lds:A, 6ldt:A
18	5eud:A	454	201	0.1099	0.1123	0.2537	0.005	5eud:B, 5eue:A, 5eue:B, 3mad:A, 3mad:B, 3mau:A, 3mau:B, 3mau:C, 3mau:D, 3mbb:A, 3mbb:B
19	5hsj:A	606	112	0.0776	0.0594	0.3214	0.22	5hsj:B
20	7l7b:D	1148	55	0.0388	0.0157	0.3273	0.55
21	1iay:A	419	89	0.0625	0.0692	0.3258	0.64	1iax:A, 1iax:B
22	6ha8:V	541	103	0.0560	0.0481	0.2524	0.64
23	4naw:A	88	60	0.0388	0.2045	0.3000	4.6	4naw:E, 4naw:I, 4naw:M
24	1cp2:A	269	87	0.0366	0.0632	0.1954	4.6	1cp2:B
25	5w21:A	922	32	0.0259	0.0130	0.3750	8.4	7ysh:A, 7ysu:A, 7ysw:A
26	9azb:A	396	94	0.0603	0.0707	0.2979	8.5	9aza:A
27	8k9e:B	951	42	0.0345	0.0168	0.3810	9.8	8k9f:B, 8x2j:B

[Back]