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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
MMSEIIAVANQKGGVGKTTTAVNLAASLAVHEKKILLIDFDPQANATSSLGFRRDKIDYDIYHVLIGRKQISQVILKTQM
PFLDLVPSNLGLAGFEKTFYDSQDENKRGELMLKNALESVVGLYDYIIIDSPPALGPLTINSLSAAHSVIIPIQCEFFAL
EGTKLLLNTIRMLQKSTNPKLKIRGFLPTMHVPQLNLTKGVLAELFKYFDSEFFRDSATGEYIMIPKSVKLAESPSFGKP
ILLYDIKSNGSIAYQKLAQSILQG

The query sequence (length=264) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6iub:A 264 264 1.0000 1.0000 1.0000 0.0 6iub:B, 6iuc:A, 6iuc:B, 6iuc:C, 6iuc:D, 6iud:B, 6iud:C, 6iud:D, 6iud:A, 8jmj:A, 8jmj:B, 8jmj:C, 8jmj:D, 8jmk:A, 8jmk:B, 8jmk:C, 8jmk:D, 8jml:A, 8jml:B
2 2bej:A 245 264 0.3939 0.4245 0.3939 1.95e-56 2bek:A, 2bek:B, 2bek:C, 2bek:D
3 5if9:A 251 262 0.3523 0.3705 0.3550 1.65e-48 5if9:B, 5ihp:A, 5ihp:B
4 5tvk:B 242 176 0.2386 0.2603 0.3580 7.36e-22 3k9g:A, 5tvk:A
5 7dut:A 220 172 0.2045 0.2455 0.3140 6.54e-19 7dv3:A, 7dv3:B, 7dwr:A, 7dwr:D, 7dwr:B, 7dwr:C
6 1ion:A 243 270 0.2727 0.2963 0.2667 1.78e-12
7 6nop:B 262 169 0.1856 0.1870 0.2899 3.76e-12 6non:B, 6noo:B, 6nop:A
8 7npf:C 404 169 0.2159 0.1411 0.3373 9.59e-12 7npe:A, 7npe:B, 7npe:C, 7npe:D, 7npf:B, 7npf:D, 7npf:F, 7npf:H, 7npf:E, 7npf:G, 7npf:A
9 4v02:A 244 251 0.2576 0.2787 0.2709 2.11e-11 4v02:B, 4v03:A, 4v03:B
10 3ez2:B 394 165 0.1591 0.1066 0.2545 4.04e-11 3ez2:A, 3ez6:A, 3ez6:B
11 2oze:A 284 209 0.2348 0.2183 0.2967 6.94e-11
12 1g3q:A 237 272 0.2917 0.3249 0.2831 8.54e-11 1g3r:A
13 5k5z:D 314 190 0.1970 0.1656 0.2737 2.79e-08 5k5z:A, 5u1j:B, 5u1j:A, 5u1j:C, 5u1j:D
14 3q9l:A 257 262 0.2348 0.2412 0.2366 6.87e-08 3q9l:B, 3r9i:A, 3r9i:B, 3r9i:C, 3r9i:D, 3r9j:A, 3r9j:B
15 6riq:C 254 267 0.2576 0.2677 0.2547 2.17e-07 6riq:D, 6riq:G, 6riq:J, 6riq:K, 6riq:M, 6riq:N, 6riq:Q, 6riq:R, 6riq:U, 6riq:V
16 3cwq:A 206 43 0.1023 0.1311 0.6279 1.94e-06 3cwq:B
17 2afh:E 289 36 0.0682 0.0623 0.5000 6.93e-05 2afh:F, 2afi:E, 2afi:F, 2afi:G, 2afi:H, 2afi:M, 2afi:N, 2afi:O, 2afi:P, 2c8v:A, 1de0:A, 1de0:B, 8dfc:E, 8dfc:F, 8dfd:E, 8dfd:F, 8dfd:G, 8dfd:H, 1fp6:A, 1fp6:B, 1fp6:C, 1fp6:D, 1g1m:A, 1g1m:B, 1g20:E, 1g20:F, 1g20:G, 1g20:H, 1g21:E, 1g21:F, 1g21:G, 1g21:H, 1g5p:A, 1g5p:B, 1m1y:E, 1m1y:F, 1m1y:G, 1m1y:H, 1m1y:M, 1m1y:N, 1m1y:O, 1m1y:P, 1m34:E, 1m34:F, 1m34:G, 1m34:H, 1m34:M, 1m34:N, 1m34:O, 1m34:P, 1n2c:E, 1n2c:F, 1n2c:G, 1n2c:H, 6n4j:A, 6n4j:B, 6n4k:A, 6n4k:B, 6n4l:A, 6n4m:A, 1nip:B, 1nip:A, 2nip:A, 2nip:B, 6o0b:A, 6o0b:B, 6q93:A, 6q93:B, 6q93:C, 6q93:D, 6q93:E, 6q93:F, 6q93:G, 6q93:H, 1rw4:A, 7t4h:A, 8tc3:A, 8tc3:B, 7tne:A, 7tpn:A, 7tpo:A, 7tpv:A, 7tpw:A, 7tpx:A, 7tpy:A, 7tpz:A, 7tq0:A, 7tq9:A, 7tqc:A, 7tqe:A, 7tqf:A, 7tqh:A, 7tqi:A, 7tqj:A, 7tqk:A, 7ut8:E, 7ut8:F, 7ut9:E, 7ut9:F, 7uta:E, 7uta:F, 7uta:G, 7uta:H, 4wza:E, 4wza:F, 4wza:G, 4wza:H, 4wzb:E, 4wzb:F, 4wzb:G, 4wzb:H, 1xcp:A, 1xcp:B, 1xcp:C, 1xcp:D, 1xd8:A, 1xd8:B, 1xd9:A, 1xd9:B, 1xdb:A, 1xdb:B
18 5u1g:D 211 133 0.1402 0.1754 0.2782 8.97e-05 4dzz:A, 4dzz:B, 4e03:A, 4e03:B, 4e07:A, 4e07:B, 4e09:A, 5u1g:B, 5u1g:C, 5u1g:A
19 6nzj:A 273 39 0.0720 0.0696 0.4872 2.06e-04 6nzj:B
20 4jlv:A 228 171 0.1818 0.2105 0.2807 2.96e-04
21 7qqa:A 273 37 0.0720 0.0696 0.5135 3.66e-04 7qqa:B, 7qqa:C, 7qqa:D
22 8oie:D 272 37 0.0720 0.0699 0.5135 4.79e-04 8oie:E, 8oie:I, 8oie:J
23 3fwy:A 268 39 0.0644 0.0634 0.4359 6.51e-04 3fwy:B, 6uyk:A, 6uyk:B, 6uyk:C, 6uyk:D
24 2xj9:A 265 168 0.1515 0.1509 0.2381 8.62e-04 2xj9:B
25 3la6:B 260 126 0.1250 0.1269 0.2619 0.001 3la6:A, 3la6:C, 3la6:D, 3la6:E, 3la6:F, 3la6:G, 3la6:H, 3la6:I, 3la6:J, 3la6:K, 3la6:L, 3la6:M, 3la6:N, 3la6:O, 3la6:P
26 2ynm:B 268 46 0.0795 0.0784 0.4565 0.001 2ynm:A
27 1cp2:A 269 39 0.0644 0.0632 0.4359 0.002 1cp2:B
28 8q5x:A 280 37 0.0644 0.0607 0.4595 0.002 8q5x:C, 8q5x:B, 8q5x:D
29 8q5t:A 280 37 0.0682 0.0643 0.4865 0.004 8q50:A, 8q5t:B, 8q5t:C, 8q5t:D, 8q5v:A, 8q5v:B, 8q5v:C, 8q5v:D, 8q5v:E, 8q5v:F, 8q5v:G, 8q5v:H, 8q5v:J, 8q5v:K, 8q5v:L, 8q5v:M
30 3kb1:A 243 152 0.1553 0.1687 0.2697 0.009 3kb1:B, 6oby:A, 6oby:B
31 8zkc:A 346 102 0.1212 0.0925 0.3137 0.010
32 6z0p:A 242 139 0.1364 0.1488 0.2590 0.015 6z0p:B
33 3kjg:A 254 47 0.0795 0.0827 0.4468 0.016 3kjg:B, 3kjh:A, 3kji:A, 3kji:B
34 5aup:I 241 182 0.1780 0.1950 0.2582 0.021 5aun:B, 5auo:B, 5aup:B, 3vx3:A, 3vx3:B
35 1ii0:B 553 34 0.0606 0.0289 0.4706 0.027 1f48:A, 1ihu:A, 1ii0:A, 1ii9:A, 1ii9:B
36 1ii0:B 553 33 0.0606 0.0289 0.4848 6.3 1f48:A, 1ihu:A, 1ii0:A, 1ii9:A, 1ii9:B
37 7nii:E 525 138 0.1326 0.0667 0.2536 0.028 7nih:A, 7nih:B, 7nih:C, 7nih:D, 7nih:E, 7nih:F, 7nih:G, 7nih:H
38 8q5w:G 281 37 0.0682 0.0641 0.4865 0.030 8q5w:A, 8q5w:B, 8q5w:C, 8q5w:D, 8q5w:E, 8q5w:F, 8q5w:H, 8q5w:I, 8q5w:J, 8q5w:K, 8q5w:L
39 7nii:C 565 139 0.1326 0.0619 0.2518 0.033 7nii:B, 7nii:G, 7nii:H
40 7nii:A 663 139 0.1326 0.0528 0.2518 0.051 7nii:D, 7nii:F
41 6u1q:A 208 123 0.1326 0.1683 0.2846 0.057 6u1q:B
42 4rz3:A 244 34 0.0568 0.0615 0.4412 0.36 4rz3:B
43 5zme:A 638 40 0.0606 0.0251 0.4000 0.37 5zmf:A
44 3b7p:A 281 36 0.0568 0.0534 0.4167 0.74 3b7p:B, 3b7p:C, 4bp1:A, 4bp1:B, 4bp1:C, 4bp3:A, 4bp3:B, 4bp3:C, 4cwa:A, 4cwa:C, 4cxm:A, 4cxm:B, 4cxm:C, 2hte:A, 2hte:B, 2hte:C, 6hy1:A, 6hy1:B, 6hy1:C, 6i1n:A, 6i1n:B, 6i1n:C, 2i7c:A, 2i7c:B, 2i7c:C, 2pt6:A, 2pt6:B, 2pt6:C, 2pt9:A, 2pt9:B, 2pt9:C, 3rie:A, 3rie:B, 3rie:C, 4uoe:A, 4uoe:B, 4uoe:C
45 1o4t:A 115 61 0.0644 0.1478 0.2787 1.2 1o4t:B
46 2ved:B 254 135 0.1250 0.1299 0.2444 1.6 3bfv:A, 3bfv:B, 2ved:A
47 7ejw:A 274 270 0.2424 0.2336 0.2370 3.7 7ejw:B, 5j1j:A, 5j1j:B, 8p53:A, 8p53:B, 8pb9:A, 8pb9:B
48 6g2g:B 273 40 0.0568 0.0549 0.3750 3.8 6g2g:A
49 4pfy:A 539 27 0.0417 0.0204 0.4074 5.2 4pft:A, 4pft:B, 4pfy:B
50 4gnk:B 769 26 0.0455 0.0156 0.4615 5.4 8emv:A, 8emw:A, 8emx:A, 4gnk:D, 4qj3:B, 4qj4:B, 4qj5:B, 7sq2:B, 8uqn:B, 8uqo:Q
51 6bs3:A 330 139 0.1402 0.1121 0.2662 6.9 6bs4:A, 6bs5:A
52 8bx8:C 3947 37 0.0568 0.0038 0.4054 7.7 7k58:C, 7k5b:C, 7kek:C

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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