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BioLiP
>protein
MMIVIKTAIPDVLILEPKVFGDERGFFFESYNQQTFEELIGRKVTFVQDNHSKSKKNVLRGLHFQRGENAQGKLVRCAVG
EVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEYAEFLYKATNYYSPSSEGSILWNDEAIGIEWPF
SQLPELSAKDAAAPLLDQALLTE

The query sequence (length=183) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1dzt:A 183 183 1.0000 1.0000 1.0000 9.68e-137 1dzt:B
2 2ixh:A 184 169 0.6066 0.6033 0.6568 4.74e-82 2ixh:B, 2ixi:B, 2ixi:A, 2ixk:A, 2ixk:B
3 6ndr:A 188 176 0.5738 0.5585 0.5966 9.64e-72 6ndr:B
4 6c46:A 183 177 0.5301 0.5301 0.5480 6.94e-64 6c46:D
5 7pvi:AAA 199 175 0.5137 0.4724 0.5371 2.89e-60 7pvi:BBB, 7pwb:AAA, 7pwb:BBB
6 1epz:A 183 168 0.4918 0.4918 0.5357 8.51e-58
7 3ryk:A 175 176 0.4863 0.5086 0.5057 1.21e-57 3ryk:B
8 2ixc:A 198 168 0.3607 0.3333 0.3929 4.40e-40 2ixc:B, 2ixc:C, 2ixc:D
9 5buv:A 174 167 0.3279 0.3448 0.3593 9.51e-36 5buv:B
10 7pwh:AAA 203 159 0.3224 0.2906 0.3711 1.26e-29
11 1oi6:A 202 175 0.3169 0.2871 0.3314 5.77e-29 1oi6:B
12 8dcl:A 185 165 0.3005 0.2973 0.3333 1.17e-27 7anj:A, 7anj:B, 8dak:A, 8dak:B, 8dcl:B
13 4hn1:C 201 164 0.2896 0.2637 0.3232 3.09e-26 4hmz:A, 4hmz:B, 4hmz:C, 4hmz:D, 4hn1:A, 4hn1:B, 4hn1:D
14 7m15:D 181 165 0.3060 0.3094 0.3394 4.38e-25 7an4:A, 7an4:B, 7an4:D, 7m14:A, 7m14:B, 7m14:C, 7m14:D, 7m14:E, 7m14:F, 7m15:A, 7m15:B, 7m15:C, 7m15:E, 7m15:F
15 8dco:B 181 165 0.2951 0.2983 0.3273 4.80e-24 8db5:A, 8db5:B, 8db5:C, 8db5:D, 8db5:E, 8db5:F, 8db5:G, 8db5:H, 8dco:A
16 2ixl:C 197 177 0.2951 0.2741 0.3051 7.87e-14 2ixl:A, 2ixl:B, 2ixl:D, 1nyw:A, 1nyw:B, 1nzc:A, 1nzc:B, 1nzc:C, 1nzc:D
17 5x5t:A 476 49 0.0874 0.0336 0.3265 6.5 5x5t:B, 5x5u:A, 5x5u:B
18 8ptk:f 4502 50 0.0820 0.0033 0.3000 7.1 8ptk:e
19 7z8f:e 4579 50 0.0820 0.0033 0.3000 7.4 5owo:A, 8pr2:f, 8ptk:m, 8ptk:n, 7z8f:f, 7z8f:m, 7z8f:n, 7z8h:A
20 8pyh:B 319 35 0.0820 0.0470 0.4286 8.0 8pyh:A
21 5ltm:B 537 60 0.0984 0.0335 0.3000 8.1 5ltm:A
22 8a1y:F 408 61 0.0874 0.0392 0.2623 8.7 8a1t:F, 8a1u:F, 8a1v:F, 8a1w:F, 8a1x:F, 8acw:F, 8acy:F, 8ad0:F, 8ad3:A, 8ad3:B, 8ad4:A, 8ad4:B, 8ad5:A, 8ad5:B, 4u9u:A, 4u9u:B, 4uaj:A, 7xk3:F, 7xk4:F, 7xk5:F, 7xk6:F, 7xk7:F
23 7dhe:B 147 46 0.0765 0.0952 0.3043 10.0 7dhe:A, 7dhe:C, 7dhe:D

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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