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BioLiP
>protein
MLYNVALIKFKDIADKRGHLTPIEGKIDIPFDIKRVYYITKVDKDITRGYHSHKKLHQVLICLNGSVKIRLKIPDEEKII
ELNDPSVGLYIGPLVWHEMFDFTEGCVLLVLASEYYDETDYIRNYDFYIDEAKKRF

The query sequence (length=136) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 4o9g:A 138 136 0.9779 0.9638 0.9779 1.53e-94 4o9e:A, 4o9e:B, 4o9g:B, 4zu5:B, 4zu7:A, 4zu7:B, 4zu7:C, 4zu7:D, 4zu7:E, 4zu7:F, 4zu7:G, 4zu7:H
2 2pae:A 136 122 0.5000 0.5000 0.5574 5.73e-45 2pa7:A, 2pa7:B, 2pae:B, 2pak:A, 2pak:B, 2pam:A, 2pam:B
3 5tpu:A 133 129 0.4412 0.4511 0.4651 3.16e-36 5tpu:B, 5tpu:C, 5tpu:D
4 7n67:B 133 123 0.4191 0.4286 0.4634 1.52e-34 7n67:A
5 5tpv:B 138 127 0.3382 0.3333 0.3622 8.50e-26 5tpv:A, 5tpv:C
6 4mzu:F 294 124 0.3309 0.1531 0.3629 7.53e-21 4mzu:A, 4mzu:C, 4mzu:E, 4mzu:B, 4mzu:D, 4mzu:G, 4mzu:I, 4mzu:K, 4mzu:H, 4mzu:J, 4mzu:L, 4zu4:A, 4zu4:B, 4zu4:C
7 8w9z:G 218 93 0.1691 0.1055 0.2473 0.64 8wa0:G, 8wa1:G
8 7pwh:AAA 203 125 0.1985 0.1330 0.2160 1.3
9 7e1v:A 378 90 0.1618 0.0582 0.2444 9.8 7e1v:M, 7e1w:M, 7e1w:A, 7e1x:M, 7e1x:A, 8hcr:A, 8hcr:M

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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