BioLiP

>protein
MLLDEGWLAEARRVPSPHYDCRPDDENPSLLVVHNISLPPGEFGGPWIDALFTGTIDPNAHPYFAGIAHLRVSAHCLIRR
DGEIVQYVPFDKRAWHAGVSSYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTNALITRYPAIANNMTGHCNIAPE
RKTDPGPSFDWARFRALV

The query sequence (length=178) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	1j3g:A	187	178	1.0000	0.9519	1.0000	1.19e-134	2y28:A, 2y28:B, 2y28:C, 2y2b:A, 2y2b:B, 2y2b:C, 2y2d:A, 2y2d:B, 2y2d:C, 2y2e:A, 2y2e:B, 2y2e:C
2	3d2y:A	257	127	0.2809	0.1946	0.3937	3.82e-19	2bh7:A, 3d2z:A, 2wkx:A
3	4bol:A	243	125	0.2753	0.2016	0.3920	1.16e-18	4bol:B, 4bpa:B
4	4bxd:A	255	97	0.2135	0.1490	0.3918	2.11e-13	4bxd:B, 4bxe:A, 4bxe:B
5	3hmb:B	156	54	0.1124	0.1282	0.3704	0.062	3hmb:A, 3hmb:C, 3rdr:A
6	5x06:F	228	31	0.0787	0.0614	0.4516	0.66	5x06:E, 5x06:G, 5x06:H
7	1fwx:A	591	47	0.1067	0.0321	0.4043	0.71	1fwx:B, 1fwx:C, 1fwx:D, 2iwf:A, 2iwf:B, 2iwk:A, 2iwk:B
8	6k4t:A	260	51	0.0899	0.0615	0.3137	1.9	5axo:A, 5axr:A, 5aya:A, 5b15:A, 5b1u:A, 6k4x:A, 3vpe:A, 3vqz:A
9	7rx2:B	615	57	0.1124	0.0325	0.3509	2.1	6e0h:B, 6e0h:A, 6e1o:B, 6e1o:A, 7rwj:B, 7rwj:A, 7rx2:A
10	7rxg:B	650	57	0.1124	0.0308	0.3509	2.1	7rxg:A, 7rxh:A
11	6sh6:A	681	27	0.0618	0.0162	0.4074	4.0	8ejm:A, 8ro2:DX, 5xdr:A
12	7aih:K	179	58	0.0955	0.0950	0.2931	8.7	7am2:K, 7ane:K

[Back]