BioLiP

>protein
MLIEIHMIQNHSPANLNRDDLGAPKTCYFGGVLRSRISSQCIKRSIRTSNDFKALLGGVRTRRLADLIQQEAGETECWKK
AQEILNKCGFKNKDDNTKMLVFMSKDKIKDLARIVLDNSLGLTEAAQQVANVIAQATLAPDIALCGRMLEPNDKDKDKKV
KWSNTTVEAALQVAHAISTHIARPEIDYFVAADDVPGEDAGAGHIGESMFASACFYKYFSIDWEQLVKNLKGDTNLAAHT
VGAFLLAAAKTNPSGKQNSFAAHNYPDGILVEFKNSPISYANAFVRPVSVVKESDLVEQSIGQLSNYVNDIRLGYYDEQS
PVIGFWFSPNNRYPLGYKHSKLASRNIGNLNELVGAVLDYIGGFKWEEVQ

The query sequence (length=370) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	8yb6:G	377	370	1.0000	0.9814	1.0000	0.0	8yb6:D, 8yb6:E, 8yb6:F, 8yb6:H, 8yha:E, 8yha:F, 8yha:G, 8yha:H
2	8yha:D	355	370	0.9459	0.9859	0.9459	0.0
3	8yb6:I	268	228	0.5730	0.7910	0.9298	2.63e-153	8yha:I
4	8yb6:I	268	56	0.1514	0.2090	1.0000	2.59e-32	8yha:I
5	6c66:B	334	323	0.2784	0.3084	0.3189	5.43e-42
6	6c66:C	367	346	0.3027	0.3052	0.3237	6.97e-42	6c66:D, 6c66:E, 6c66:F, 5u07:E, 5u07:F, 5u07:G, 5u07:H, 5u0a:E, 5u0a:F, 5u0a:G, 5u0a:H
7	5cd4:F	363	332	0.2811	0.2865	0.3133	8.25e-38	5cd4:B, 5cd4:C, 5cd4:D, 5cd4:E, 5cd4:G, 5cd4:N, 5cd4:O, 5cd4:P, 5cd4:Q, 5cd4:R, 5cd4:S, 5h9e:E, 5h9e:F, 5h9e:G, 5h9e:H, 5h9e:I, 5h9f:E, 5h9f:F, 5h9f:G, 5h9f:H, 5h9f:I, 4qyz:D, 4qyz:E, 4qyz:F, 4qyz:G, 4qyz:H, 4tvx:F, 4tvx:D, 4tvx:E, 4tvx:C, 4tvx:B, 4tvx:G, 4tvx:R, 4tvx:P, 4tvx:Q, 4tvx:O, 4tvx:N, 4tvx:S, 4u7u:E, 4u7u:F, 4u7u:G, 4u7u:H, 4u7u:I, 4u7u:J, 4u7u:Q, 4u7u:R, 4u7u:S, 4u7u:T, 4u7u:U, 4u7u:V
8	5u07:D	260	173	0.1622	0.2308	0.3468	1.21e-23	5u0a:D
9	5u07:D	260	74	0.0892	0.1269	0.4459	8.03e-11	5u0a:D
10	4qyz:I	256	229	0.1919	0.2773	0.3100	5.54e-22
11	4qyz:I	256	56	0.0703	0.1016	0.4643	5.10e-09
12	5h9e:D	318	334	0.2486	0.2893	0.2754	6.64e-22	5h9f:D
13	6c66:H	329	345	0.2514	0.2827	0.2696	8.72e-21	5u07:I, 5u0a:I
14	2ykt:A	225	136	0.0757	0.1244	0.2059	0.11
15	6uek:D	585	111	0.0919	0.0581	0.3063	0.72
16	8tde:A	256	49	0.0405	0.0586	0.3061	2.5	8rr2:A, 8rr2:B
17	5j06:B	215	37	0.0378	0.0651	0.3784	2.9	7aw6:A, 7aw6:B, 6d49:A, 6d49:B, 6d4a:A, 6d4a:B, 5j06:D, 5j0b:A, 5j0b:B, 5j0b:C
18	7zpq:CA	1742	54	0.0486	0.0103	0.3333	2.9	7zrs:CA, 7zuw:CA
19	7p1g:M	347	45	0.0486	0.0519	0.4000	5.6	7p1g:K, 7p1g:L, 7p1g:N, 7p1g:O
20	8b45:B	30	21	0.0243	0.3000	0.4286	6.7	8b45:C, 8b45:D
21	4fnm:A	569	91	0.0595	0.0387	0.2418	7.0	5ch5:A, 5ivi:A, 5ivk:A, 4qwm:A, 5tyj:A, 5tyk:A, 5tyl:A, 5tym:A, 5tyn:A, 5tyo:A, 5typ:A, 4ubi:A, 4ubj:A, 4ubk:A, 4ubl:A, 4ubm:A, 4ubn:A, 4ubo:A, 4w1p:A, 4w1q:A, 4w1r:A, 4w1s:A

[Back]